Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622608
Identifier: 84622608
GI number: 84622608
Start: 1042501
End: 1044180
Strand: Direct
Name: 84622608
Synonym: XOO_0951
Alternate gene names: NA
Gene position: 1042501-1044180 (Clockwise)
Preceding gene: 84622607
Following gene: 84622609
Centisome position: 21.1
GC content: 61.01
Gene sequence:
>1680_bases ATGAGCGCGTCACAACGGCCTGGCATCACGCGCTATGCGCTGGTATGGCTCGGCACGCTGCTGGCCTGGGTGGCGCTGAT CCTTTTCATCTACTATCGCCAATGGCAGTCAACAGGCGTGGAGGATTCCGGCTTGGGCAACGATATTCGTAATGGTGTAT TGGCGATCACCGCGCTGGTGGGCCTGGCCTTTGGAGGGCATTGGCTGTGGAAGGTACGCAGCGCGGTGGCCAAGGACCCA GCGGCCATGGCAAGCACCCAAGTCACGACAGCTGCGACCGCAACTCCGCACGGGCGCATGCTGGCTGGCGAGGGGGAACG CTATGTCTTGGAGGTGCGCGGGCTGGGCCTGGCGGTAGGCGACTACTACCAGACGGTCTGGCAGGCCATACGGGAAGACG ATGACGCGTTTAAGTCTGTGCTTCCGCAAGATCCTAAGTACTACGATCCAAATACGCGCATTGGCAGTGCCAGTCTGGCC GCCGGCACATCTTTTGGTGATGCGGCCAAGGAAGCGGTGGAGCGTTGGCCGCTGCCAGTGATCATCCTTGGGCCGCCGAC GACGATCAATGATGGCAGCACCATGGCCAACGAGATTGCACTCGATCGGCAGTCCGAGAGTCTCGGGCTCACGCTGTTTC TTTGGCAGGAGGACGCCAATGTGGCGAGTGCGCAGGCCACGCTTGAGCGGCTGTTCCAGTTCTTCGATCAGCACCCAGAC GTGCCAGAAGTGCTACTGGTTAGCAATGACTCTGAAGCAGACCGATATGGCTGGGAATCACCTGGAATGCCAAAGCGTCC TGCTGGTATCCACGTCCCACTGATGCCCGACAGCATGGTCGCGCTGTTGGTGGCGCGCAGCGATCGGGTAGACAGGTTGG TGCGCCCGTATGCCGTCGATGTGGACGATGGCATCAACAAGGACGATACGCAGTACGACATCATCAAGTTGTGGAATTTC TTCTGGGAGAAGCGCGACGCCTTCGACGAGAAATTCGAACGTGAACTCAAAGCCAAGGGCGTGAAGTTACCAGATGGCCC CGGTGTACCCAAAGCTGATTGGTGGATTGCGCAACTGCCCGAGTTATGGAAGCAGATCAGCAACAAGGGGCCGGGTGAGT TCAAGCCCAGCCCGTATCTGCCGGTGCGCTGGGCGCGCTGGCAGGTGCAGCAGTTCGACGAATCCCCGTTGCTGGGCTAT CTGCATCGCCCGGTGCATGTGCCCCTGACCGACGAACAGGGCAAGCCACTCAAGCGTGCCGGGCAGGTGGAGGCGCTGCG CAAGGGCTGGGCCCAGGCCGTGTCGGCCCTACCGGAAGATGCCAAGCCCACGCGCGTGTTCTACGACACCAGCCTGGATC GCGAATGGGTCATTCCCCTGACGCAAGCGCTGCACGGCAACGCCGAGGGCATCGAACTGGACGACAAGCATGAGGGCTAC AACATCGGTCGGCGGCTGGGCAATACCGGTGTCAGTTCCGCGCTAGTGCAGATCGGGTTGGCGATACAGGCCGGCTATGA AGACGACCGCACCAGTGCGACGGTCAACCTGACTCCCGATGGCTACGCCGGCATCGTGATGGTCAGCCCGCCGGATGCGG CCAGCAAGGGCATCAATACCAAGCATCGCGGCAAGAATCCTTTCATGGCGCATGTCCCCGGATGGCAAGACCCTCAATGA
Upstream 100 bases:
>100_bases ACTACTACACAACAGGAAAATTTCCAGATGGCGTGTCTAAGGAGCCGCCAGACAAATACGTGGTAAGCAGGACCCGAGCG CAGCGCGCGGAGAGCACCGA
Downstream 100 bases:
>100_bases GCCGCGCATTCATCGTCGAAGGCGACGCCCACAGCCACGGCGGCCATGTGCTGGCCGGTTCCGAGCACGCAGGCATCGAT GGCCAGGCGTTTGCGTGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 559; Mature: 558
Protein sequence:
>559_residues MSASQRPGITRYALVWLGTLLAWVALILFIYYRQWQSTGVEDSGLGNDIRNGVLAITALVGLAFGGHWLWKVRSAVAKDP AAMASTQVTTAATATPHGRMLAGEGERYVLEVRGLGLAVGDYYQTVWQAIREDDDAFKSVLPQDPKYYDPNTRIGSASLA AGTSFGDAAKEAVERWPLPVIILGPPTTINDGSTMANEIALDRQSESLGLTLFLWQEDANVASAQATLERLFQFFDQHPD VPEVLLVSNDSEADRYGWESPGMPKRPAGIHVPLMPDSMVALLVARSDRVDRLVRPYAVDVDDGINKDDTQYDIIKLWNF FWEKRDAFDEKFERELKAKGVKLPDGPGVPKADWWIAQLPELWKQISNKGPGEFKPSPYLPVRWARWQVQQFDESPLLGY LHRPVHVPLTDEQGKPLKRAGQVEALRKGWAQAVSALPEDAKPTRVFYDTSLDREWVIPLTQALHGNAEGIELDDKHEGY NIGRRLGNTGVSSALVQIGLAIQAGYEDDRTSATVNLTPDGYAGIVMVSPPDAASKGINTKHRGKNPFMAHVPGWQDPQ
Sequences:
>Translated_559_residues MSASQRPGITRYALVWLGTLLAWVALILFIYYRQWQSTGVEDSGLGNDIRNGVLAITALVGLAFGGHWLWKVRSAVAKDP AAMASTQVTTAATATPHGRMLAGEGERYVLEVRGLGLAVGDYYQTVWQAIREDDDAFKSVLPQDPKYYDPNTRIGSASLA AGTSFGDAAKEAVERWPLPVIILGPPTTINDGSTMANEIALDRQSESLGLTLFLWQEDANVASAQATLERLFQFFDQHPD VPEVLLVSNDSEADRYGWESPGMPKRPAGIHVPLMPDSMVALLVARSDRVDRLVRPYAVDVDDGINKDDTQYDIIKLWNF FWEKRDAFDEKFERELKAKGVKLPDGPGVPKADWWIAQLPELWKQISNKGPGEFKPSPYLPVRWARWQVQQFDESPLLGY LHRPVHVPLTDEQGKPLKRAGQVEALRKGWAQAVSALPEDAKPTRVFYDTSLDREWVIPLTQALHGNAEGIELDDKHEGY NIGRRLGNTGVSSALVQIGLAIQAGYEDDRTSATVNLTPDGYAGIVMVSPPDAASKGINTKHRGKNPFMAHVPGWQDPQ >Mature_558_residues SASQRPGITRYALVWLGTLLAWVALILFIYYRQWQSTGVEDSGLGNDIRNGVLAITALVGLAFGGHWLWKVRSAVAKDPA AMASTQVTTAATATPHGRMLAGEGERYVLEVRGLGLAVGDYYQTVWQAIREDDDAFKSVLPQDPKYYDPNTRIGSASLAA GTSFGDAAKEAVERWPLPVIILGPPTTINDGSTMANEIALDRQSESLGLTLFLWQEDANVASAQATLERLFQFFDQHPDV PEVLLVSNDSEADRYGWESPGMPKRPAGIHVPLMPDSMVALLVARSDRVDRLVRPYAVDVDDGINKDDTQYDIIKLWNFF WEKRDAFDEKFERELKAKGVKLPDGPGVPKADWWIAQLPELWKQISNKGPGEFKPSPYLPVRWARWQVQQFDESPLLGYL HRPVHVPLTDEQGKPLKRAGQVEALRKGWAQAVSALPEDAKPTRVFYDTSLDREWVIPLTQALHGNAEGIELDDKHEGYN IGRRLGNTGVSSALVQIGLAIQAGYEDDRTSATVNLTPDGYAGIVMVSPPDAASKGINTKHRGKNPFMAHVPGWQDPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61827; Mature: 61696
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASQRPGITRYALVWLGTLLAWVALILFIYYRQWQSTGVEDSGLGNDIRNGVLAITALV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH GLAFGGHWLWKVRSAVAKDPAAMASTQVTTAATATPHGRMLAGEGERYVLEVRGLGLAVG HHHHCCHHHHHHHHHHHCCCHHHHHCCEEEEEECCCCCCEEECCCCEEEEEEECCEEEHH DYYQTVWQAIREDDDAFKSVLPQDPKYYDPNTRIGSASLAAGTSFGDAAKEAVERWPLPV HHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCE IILGPPTTINDGSTMANEIALDRQSESLGLTLFLWQEDANVASAQATLERLFQFFDQHPD EEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCC VPEVLLVSNDSEADRYGWESPGMPKRPAGIHVPLMPDSMVALLVARSDRVDRLVRPYAVD CCCEEEEECCCCHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCHHHHHHHCCEEEE VDDGINKDDTQYDIIKLWNFFWEKRDAFDEKFERELKAKGVKLPDGPGVPKADWWIAQLP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH ELWKQISNKGPGEFKPSPYLPVRWARWQVQQFDESPLLGYLHRPVHVPLTDEQGKPLKRA HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCEEECCCCCCCCCHHHH GQVEALRKGWAQAVSALPEDAKPTRVFYDTSLDREWVIPLTQALHGNAEGIELDDKHEGY HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEHHHHHHHCCCCCCCCCCCCCCCH NIGRRLGNTGVSSALVQIGLAIQAGYEDDRTSATVNLTPDGYAGIVMVSPPDAASKGINT HHHHHHCCCCHHHHHHHHHHHEECCCCCCCCCEEEEECCCCCEEEEEECCCCHHHCCCCC KHRGKNPFMAHVPGWQDPQ CCCCCCCEEEECCCCCCCC >Mature Secondary Structure SASQRPGITRYALVWLGTLLAWVALILFIYYRQWQSTGVEDSGLGNDIRNGVLAITALV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH GLAFGGHWLWKVRSAVAKDPAAMASTQVTTAATATPHGRMLAGEGERYVLEVRGLGLAVG HHHHCCHHHHHHHHHHHCCCHHHHHCCEEEEEECCCCCCEEECCCCEEEEEEECCEEEHH DYYQTVWQAIREDDDAFKSVLPQDPKYYDPNTRIGSASLAAGTSFGDAAKEAVERWPLPV HHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCE IILGPPTTINDGSTMANEIALDRQSESLGLTLFLWQEDANVASAQATLERLFQFFDQHPD EEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCC VPEVLLVSNDSEADRYGWESPGMPKRPAGIHVPLMPDSMVALLVARSDRVDRLVRPYAVD CCCEEEEECCCCHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCHHHHHHHCCEEEE VDDGINKDDTQYDIIKLWNFFWEKRDAFDEKFERELKAKGVKLPDGPGVPKADWWIAQLP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH ELWKQISNKGPGEFKPSPYLPVRWARWQVQQFDESPLLGYLHRPVHVPLTDEQGKPLKRA HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCEEECCCCCCCCCHHHH GQVEALRKGWAQAVSALPEDAKPTRVFYDTSLDREWVIPLTQALHGNAEGIELDDKHEGY HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEHHHHHHHCCCCCCCCCCCCCCCH NIGRRLGNTGVSSALVQIGLAIQAGYEDDRTSATVNLTPDGYAGIVMVSPPDAASKGINT HHHHHHCCCCHHHHHHHHHHHEECCCCCCCCCEEEEECCCCCEEEEEECCCCHHHCCCCC KHRGKNPFMAHVPGWQDPQ CCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA