Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622547
Identifier: 84622547
GI number: 84622547
Start: 975596
End: 976012
Strand: Direct
Name: 84622547
Synonym: XOO_0890
Alternate gene names: NA
Gene position: 975596-976012 (Clockwise)
Preceding gene: 84622546
Following gene: 84622550
Centisome position: 19.75
GC content: 66.43
Gene sequence:
>417_bases ATGACCAGCGGTCAGCGCAGCAACCAGCAACTCACCCGCGCGTATCTACAGCGCATTGCCAGCATCGATCGCGCAGGCCC CACGCTCAACGCGGTGATCGAACTCAATCCGCAAGCCGAAGCAGACGCACGCACCTTGGACGCCGAACGCAGCGCCGGCC ATGTCCGCAGGCCGCCACATGGCATTCCGGTGCTGCTCAAGGACAACATCGACGCGCTGCCGATGGTCAACAGCGCCGGC TCGCTGGCCCTGGCCGAGTTCCGTCCCGGCCGCGATGCCTTCCTGGTGCAGTGCCGGCGCGGTGATCCTGGGCAAGACCA ATCTCAGCAAATGGGCCAACTTCCGCTCCACCCAGTCCAGCTCCGGCTGGAGCGGGCGCGGCGGGCTGACCCGCGACCCG TATGCACTGGATCGTAA
Upstream 100 bases:
>100_bases ATGCCGGTGATCCGTCGCGCGCGGCGACCGGCATCCCCGAAGATTCTGCCGCTCCCCCATCGACCTGACCGATGCCGACG TGGCCGGCCTGCAAGCCCGT
Downstream 100 bases:
>100_bases TCCCTGCGGCTCCAGCGCCGGCACCGGCGCAGCGATCGCCGCCAGCCTCGCCATTGTCGGCATCGGCAGCGAAACCGATG GCAGCATCACCTGCCCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Amidase Family Protein; Secreted Amidase; Glutaminyl-TRNA Synthase; Peptide Amidase; Glutamyl-TRNA(Gln) Amidotransferase Subunit A; Glutaminyl-TRNA Synthase Glutamine-Hydrolyzing Subunit A; Glu-TRNAGln Amidotransferase A Subunit
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MTSGQRSNQQLTRAYLQRIASIDRAGPTLNAVIELNPQAEADARTLDAERSAGHVRRPPHGIPVLLKDNIDALPMVNSAG SLALAEFRPGRDAFLVQCRRGDPGQDQSQQMGQLPLHPVQLRLERARRADPRPVCTGS
Sequences:
>Translated_138_residues MTSGQRSNQQLTRAYLQRIASIDRAGPTLNAVIELNPQAEADARTLDAERSAGHVRRPPHGIPVLLKDNIDALPMVNSAG SLALAEFRPGRDAFLVQCRRGDPGQDQSQQMGQLPLHPVQLRLERARRADPRPVCTGS >Mature_137_residues TSGQRSNQQLTRAYLQRIASIDRAGPTLNAVIELNPQAEADARTLDAERSAGHVRRPPHGIPVLLKDNIDALPMVNSAGS LALAEFRPGRDAFLVQCRRGDPGQDQSQQMGQLPLHPVQLRLERARRADPRPVCTGS
Specific function: Unknown
COG id: COG0154
COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15092; Mature: 14961
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSGQRSNQQLTRAYLQRIASIDRAGPTLNAVIELNPQAEADARTLDAERSAGHVRRPPH CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCC GIPVLLKDNIDALPMVNSAGSLALAEFRPGRDAFLVQCRRGDPGQDQSQQMGQLPLHPVQ CCCEEECCCCCCCCEECCCCCEEEECCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCHHH LRLERARRADPRPVCTGS HHHHHHHCCCCCCCCCCC >Mature Secondary Structure TSGQRSNQQLTRAYLQRIASIDRAGPTLNAVIELNPQAEADARTLDAERSAGHVRRPPH CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCC GIPVLLKDNIDALPMVNSAGSLALAEFRPGRDAFLVQCRRGDPGQDQSQQMGQLPLHPVQ CCCEEECCCCCCCCEECCCCCEEEECCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCHHH LRLERARRADPRPVCTGS HHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA