Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is 84622547

Identifier: 84622547

GI number: 84622547

Start: 975596

End: 976012

Strand: Direct

Name: 84622547

Synonym: XOO_0890

Alternate gene names: NA

Gene position: 975596-976012 (Clockwise)

Preceding gene: 84622546

Following gene: 84622550

Centisome position: 19.75

GC content: 66.43

Gene sequence:

>417_bases
ATGACCAGCGGTCAGCGCAGCAACCAGCAACTCACCCGCGCGTATCTACAGCGCATTGCCAGCATCGATCGCGCAGGCCC
CACGCTCAACGCGGTGATCGAACTCAATCCGCAAGCCGAAGCAGACGCACGCACCTTGGACGCCGAACGCAGCGCCGGCC
ATGTCCGCAGGCCGCCACATGGCATTCCGGTGCTGCTCAAGGACAACATCGACGCGCTGCCGATGGTCAACAGCGCCGGC
TCGCTGGCCCTGGCCGAGTTCCGTCCCGGCCGCGATGCCTTCCTGGTGCAGTGCCGGCGCGGTGATCCTGGGCAAGACCA
ATCTCAGCAAATGGGCCAACTTCCGCTCCACCCAGTCCAGCTCCGGCTGGAGCGGGCGCGGCGGGCTGACCCGCGACCCG
TATGCACTGGATCGTAA

Upstream 100 bases:

>100_bases
ATGCCGGTGATCCGTCGCGCGCGGCGACCGGCATCCCCGAAGATTCTGCCGCTCCCCCATCGACCTGACCGATGCCGACG
TGGCCGGCCTGCAAGCCCGT

Downstream 100 bases:

>100_bases
TCCCTGCGGCTCCAGCGCCGGCACCGGCGCAGCGATCGCCGCCAGCCTCGCCATTGTCGGCATCGGCAGCGAAACCGATG
GCAGCATCACCTGCCCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Amidase Family Protein; Secreted Amidase; Glutaminyl-TRNA Synthase; Peptide Amidase; Glutamyl-TRNA(Gln) Amidotransferase Subunit A; Glutaminyl-TRNA Synthase Glutamine-Hydrolyzing Subunit A; Glu-TRNAGln Amidotransferase A Subunit

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MTSGQRSNQQLTRAYLQRIASIDRAGPTLNAVIELNPQAEADARTLDAERSAGHVRRPPHGIPVLLKDNIDALPMVNSAG
SLALAEFRPGRDAFLVQCRRGDPGQDQSQQMGQLPLHPVQLRLERARRADPRPVCTGS

Sequences:

>Translated_138_residues
MTSGQRSNQQLTRAYLQRIASIDRAGPTLNAVIELNPQAEADARTLDAERSAGHVRRPPHGIPVLLKDNIDALPMVNSAG
SLALAEFRPGRDAFLVQCRRGDPGQDQSQQMGQLPLHPVQLRLERARRADPRPVCTGS
>Mature_137_residues
TSGQRSNQQLTRAYLQRIASIDRAGPTLNAVIELNPQAEADARTLDAERSAGHVRRPPHGIPVLLKDNIDALPMVNSAGS
LALAEFRPGRDAFLVQCRRGDPGQDQSQQMGQLPLHPVQLRLERARRADPRPVCTGS

Specific function: Unknown

COG id: COG0154

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15092; Mature: 14961

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSGQRSNQQLTRAYLQRIASIDRAGPTLNAVIELNPQAEADARTLDAERSAGHVRRPPH
CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCC
GIPVLLKDNIDALPMVNSAGSLALAEFRPGRDAFLVQCRRGDPGQDQSQQMGQLPLHPVQ
CCCEEECCCCCCCCEECCCCCEEEECCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCHHH
LRLERARRADPRPVCTGS
HHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TSGQRSNQQLTRAYLQRIASIDRAGPTLNAVIELNPQAEADARTLDAERSAGHVRRPPH
CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCC
GIPVLLKDNIDALPMVNSAGSLALAEFRPGRDAFLVQCRRGDPGQDQSQQMGQLPLHPVQ
CCCEEECCCCCCCCEECCCCCEEEECCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCHHH
LRLERARRADPRPVCTGS
HHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA