Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622538
Identifier: 84622538
GI number: 84622538
Start: 966899
End: 967483
Strand: Direct
Name: 84622538
Synonym: XOO_0881
Alternate gene names: NA
Gene position: 966899-967483 (Clockwise)
Preceding gene: 84622537
Following gene: 84622539
Centisome position: 19.57
GC content: 64.96
Gene sequence:
>585_bases ATGCACGCCGCCGAGACCAGCGCCTTGCCGCTGTTTCCGTTGCACAACGTGTTGCTGCCAGGCGCGGCAATGGGGTTGCG TGTGTTCGAGCGCCGCTACCTGGATCTGGTACGCGAGAGCGGCCGCAATGGCACCAGCTTCGGTGTGTGCCTGATTCTGG ACGGCACCGAGGTCGGCGCGCCGGCCATGCCGGCTGCCTTCGGTACCGAAGTGCGTATTGAAGATTTCGATGTCGGGGCC GACGGTGTGCTGGTACTGCGCTTGCGCGGTACACGGCGCTTCCATGTGCAGCGCTCGCGCATCCGCGACAATGGTCTGGT GGTTGGCGAGGTGAACTGGTGCGAGCCCGACAGCGACGACGAATTGCGCCCCGAACACAGCCTGCTGGCCACGGTGCTCG AGCGCATGCTCGAACAGGTGGGGGGGCAATTCGCCTCGGTGGGGCCGGGTTTGCTGGATCAAGCCGCCTGGGTGGGCTGG CGGTTGGCCGAGCTGTTGCCGCTCACCGAACAGCAGCGTCTGTCGCTGTTGCAGCAGGACGACCCGCATCAGCGGTTGAA CCAATTGCTTGCGTGGATGCAGTAA
Upstream 100 bases:
>100_bases AGATCGCGCAGCCGGGCGACCACGTGGTGTTCATGTCCAACGGCGGCTTCGACGGTGCGCCGCGTCGTTTCCTGGCGCAG CTGTCGTGATGGCGCCGCTC
Downstream 100 bases:
>100_bases CGCGCTGAGGGATTGACGCAGGTGGCCCATCACCGCACTTGCACCGCCGCAACGGTATACTCGCCACTCTTGAGTGCGCT GCCGATCACATCCACGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: ATP-Dependent Protease La; Protease; ATP-Dependent Protease La Domain-Containing Protein; ATP-Dependent Endopeptidase Lon; Peptidase S
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MHAAETSALPLFPLHNVLLPGAAMGLRVFERRYLDLVRESGRNGTSFGVCLILDGTEVGAPAMPAAFGTEVRIEDFDVGA DGVLVLRLRGTRRFHVQRSRIRDNGLVVGEVNWCEPDSDDELRPEHSLLATVLERMLEQVGGQFASVGPGLLDQAAWVGW RLAELLPLTEQQRLSLLQQDDPHQRLNQLLAWMQ
Sequences:
>Translated_194_residues MHAAETSALPLFPLHNVLLPGAAMGLRVFERRYLDLVRESGRNGTSFGVCLILDGTEVGAPAMPAAFGTEVRIEDFDVGA DGVLVLRLRGTRRFHVQRSRIRDNGLVVGEVNWCEPDSDDELRPEHSLLATVLERMLEQVGGQFASVGPGLLDQAAWVGW RLAELLPLTEQQRLSLLQQDDPHQRLNQLLAWMQ >Mature_194_residues MHAAETSALPLFPLHNVLLPGAAMGLRVFERRYLDLVRESGRNGTSFGVCLILDGTEVGAPAMPAAFGTEVRIEDFDVGA DGVLVLRLRGTRRFHVQRSRIRDNGLVVGEVNWCEPDSDDELRPEHSLLATVLERMLEQVGGQFASVGPGLLDQAAWVGW RLAELLPLTEQQRLSLLQQDDPHQRLNQLLAWMQ
Specific function: Unknown
COG id: COG2802
COG function: function code R; Uncharacterized protein, similar to the N-terminal domain of Lon protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21557; Mature: 21557
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAAETSALPLFPLHNVLLPGAAMGLRVFERRYLDLVRESGRNGTSFGVCLILDGTEVGA CCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCC PAMPAAFGTEVRIEDFDVGADGVLVLRLRGTRRFHVQRSRIRDNGLVVGEVNWCEPDSDD CCCCCCCCCEEEEEECCCCCCCEEEEEECCCEEEHHHHHHHCCCCEEEEEECCCCCCCCC ELRPEHSLLATVLERMLEQVGGQFASVGPGLLDQAAWVGWRLAELLPLTEQQRLSLLQQD CCCCHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC DPHQRLNQLLAWMQ CHHHHHHHHHHHCC >Mature Secondary Structure MHAAETSALPLFPLHNVLLPGAAMGLRVFERRYLDLVRESGRNGTSFGVCLILDGTEVGA CCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCC PAMPAAFGTEVRIEDFDVGADGVLVLRLRGTRRFHVQRSRIRDNGLVVGEVNWCEPDSDD CCCCCCCCCEEEEEECCCCCCCEEEEEECCCEEEHHHHHHHCCCCEEEEEECCCCCCCCC ELRPEHSLLATVLERMLEQVGGQFASVGPGLLDQAAWVGWRLAELLPLTEQQRLSLLQQD CCCCHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC DPHQRLNQLLAWMQ CHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA