Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is adk [H]
Identifier: 84622536
GI number: 84622536
Start: 964599
End: 965162
Strand: Direct
Name: adk [H]
Synonym: XOO_0879
Alternate gene names: 84622536
Gene position: 964599-965162 (Clockwise)
Preceding gene: 84622533
Following gene: 84622537
Centisome position: 19.53
GC content: 63.83
Gene sequence:
>564_bases ATGCGATTGGTTCTGTTGGGACCGCCCGGTTCGGGCAAGGGCACCCAGGCGACACGTCTCAAAGACACGTTTGAGATCCC GCATATTTCTACCGGTGATCTGTTACGCGCCGAAGTGGCCGCCGGCTCGCCGCTGGGTCTGAAGGCCAAGGAAGTGATGG CACGCGGCGACTTGGTGTCCGACGACATCCTGCTCGGCATGCTCGAGGCGCGACTCGGCCAAGCCGATGTGGCCAAGGGT TTCATCCTGGATGGCTATCCGCGCAACGTAGCGCAGGCCAATGCGCTGTGTGCGCTGCTCAGCAAGATCGGTCAGCCGCT GGATGCCGTGGTGCAGTTGGATGTGGCCAGCGAGTTGCTGGTCGAGCGCATCGCCGGTCGCGCCAAGGCCGAAGGCCGCG AAGACGACAACCCGGAATCGGTGCGCAAGCGTCTGCAGGTCTATACCGATTCCACCGCGCCGGTGATCGGCTTCTACGAG CAGCGCGGCAAATTGACGCGTGTGGATGGCGTGGGTTCGCTGGACGAAGTGCTGGAGCGCATCCGCAAGGCGCTCGGCCG CTGA
Upstream 100 bases:
>100_bases GGATGCGGTAAGCTGCACTACCACACGGTCAGCGCTGGCGAAGGCTTGAGTCTAACGCCGCCAACCGCAACGCGTTTTTA TTCGAAAGTGGAGTCCACTG
Downstream 100 bases:
>100_bases GTCGGCAGGGACCGGGTGCACGTCCCGGTTGTTGGCGGTCGCGGCGTCTGGCCGCGCCGCGTTCTTGTAGGGATCGCCCG AAACGGGATTGCCCAACAGA
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase [H]
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MRLVLLGPPGSGKGTQATRLKDTFEIPHISTGDLLRAEVAAGSPLGLKAKEVMARGDLVSDDILLGMLEARLGQADVAKG FILDGYPRNVAQANALCALLSKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYE QRGKLTRVDGVGSLDEVLERIRKALGR
Sequences:
>Translated_187_residues MRLVLLGPPGSGKGTQATRLKDTFEIPHISTGDLLRAEVAAGSPLGLKAKEVMARGDLVSDDILLGMLEARLGQADVAKG FILDGYPRNVAQANALCALLSKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYE QRGKLTRVDGVGSLDEVLERIRKALGR >Mature_187_residues MRLVLLGPPGSGKGTQATRLKDTFEIPHISTGDLLRAEVAAGSPLGLKAKEVMARGDLVSDDILLGMLEARLGQADVAKG FILDGYPRNVAQANALCALLSKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYE QRGKLTRVDGVGSLDEVLERIRKALGR
Specific function: This small ubiquitous enzyme is essential for maintenance and cell growth [H]
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family [H]
Homologues:
Organism=Homo sapiens, GI4502011, Length=180, Percent_Identity=41.1111111111111, Blast_Score=148, Evalue=3e-36, Organism=Homo sapiens, GI4502013, Length=214, Percent_Identity=38.3177570093458, Blast_Score=142, Evalue=1e-34, Organism=Homo sapiens, GI7524346, Length=214, Percent_Identity=38.3177570093458, Blast_Score=142, Evalue=1e-34, Organism=Homo sapiens, GI28144897, Length=184, Percent_Identity=33.695652173913, Blast_Score=115, Evalue=2e-26, Organism=Homo sapiens, GI28144899, Length=184, Percent_Identity=33.695652173913, Blast_Score=115, Evalue=2e-26, Organism=Homo sapiens, GI7706497, Length=190, Percent_Identity=34.7368421052632, Blast_Score=112, Evalue=1e-25, Organism=Homo sapiens, GI19923437, Length=198, Percent_Identity=33.3333333333333, Blast_Score=110, Evalue=5e-25, Organism=Homo sapiens, GI310110345, Length=202, Percent_Identity=34.1584158415842, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI53832003, Length=202, Percent_Identity=34.1584158415842, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI8051579, Length=202, Percent_Identity=34.1584158415842, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI53832001, Length=202, Percent_Identity=34.1584158415842, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI209915597, Length=107, Percent_Identity=38.3177570093458, Blast_Score=80, Evalue=8e-16, Organism=Homo sapiens, GI22749187, Length=127, Percent_Identity=33.8582677165354, Blast_Score=68, Evalue=4e-12, Organism=Escherichia coli, GI1786680, Length=218, Percent_Identity=40.3669724770642, Blast_Score=152, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17552384, Length=214, Percent_Identity=37.3831775700935, Blast_Score=143, Evalue=5e-35, Organism=Caenorhabditis elegans, GI17567503, Length=178, Percent_Identity=40.4494382022472, Blast_Score=142, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17550688, Length=185, Percent_Identity=34.0540540540541, Blast_Score=104, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17533833, Length=185, Percent_Identity=33.5135135135135, Blast_Score=102, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17537943, Length=217, Percent_Identity=30.4147465437788, Blast_Score=86, Evalue=8e-18, Organism=Caenorhabditis elegans, GI25147457, Length=189, Percent_Identity=24.8677248677249, Blast_Score=70, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6320432, Length=215, Percent_Identity=39.5348837209302, Blast_Score=151, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6322828, Length=190, Percent_Identity=34.2105263157895, Blast_Score=108, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6321018, Length=198, Percent_Identity=34.8484848484849, Blast_Score=101, Evalue=8e-23, Organism=Drosophila melanogaster, GI22026816, Length=215, Percent_Identity=40.4651162790698, Blast_Score=154, Evalue=4e-38, Organism=Drosophila melanogaster, GI17737899, Length=197, Percent_Identity=36.0406091370558, Blast_Score=118, Evalue=2e-27, Organism=Drosophila melanogaster, GI24645822, Length=197, Percent_Identity=36.0406091370558, Blast_Score=118, Evalue=2e-27, Organism=Drosophila melanogaster, GI24663208, Length=161, Percent_Identity=38.5093167701863, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI17647141, Length=161, Percent_Identity=38.5093167701863, Blast_Score=111, Evalue=2e-25, Organism=Drosophila melanogaster, GI221459597, Length=185, Percent_Identity=32.4324324324324, Blast_Score=108, Evalue=3e-24, Organism=Drosophila melanogaster, GI21356893, Length=185, Percent_Identity=32.4324324324324, Blast_Score=108, Evalue=3e-24,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006259 - InterPro: IPR000850 [H]
Pfam domain/function: PF00406 ADK [H]
EC number: =2.7.4.3 [H]
Molecular weight: Translated: 20028; Mature: 20028
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLVLLGPPGSGKGTQATRLKDTFEIPHISTGDLLRAEVAAGSPLGLKAKEVMARGDLVS CEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHCCCCCH DDILLGMLEARLGQADVAKGFILDGYPRNVAQANALCALLSKIGQPLDAVVQLDVASELL HHHHHHHHHHHCCHHHHHCCCEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYEQRGKLTRVDGVGSLDEVLER HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEHHHCCCEEECCCCCCHHHHHHH IRKALGR HHHHHCC >Mature Secondary Structure MRLVLLGPPGSGKGTQATRLKDTFEIPHISTGDLLRAEVAAGSPLGLKAKEVMARGDLVS CEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHCCCCCH DDILLGMLEARLGQADVAKGFILDGYPRNVAQANALCALLSKIGQPLDAVVQLDVASELL HHHHHHHHHHHCCHHHHHCCCEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYEQRGKLTRVDGVGSLDEVLER HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEHHHCCCEEECCCCCCHHHHHHH IRKALGR HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]