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The map label for this gene is IS1086 [H]

Identifier: 84622488

GI number: 84622488

Start: 905922

End: 906884

Strand: Direct

Name: IS1086 [H]

Synonym: XOO_0831

Alternate gene names: 84622488

Gene position: 905922-906884 (Clockwise)

Preceding gene: 84622487

Following gene: 84622491

Centisome position: 18.34

GC content: 59.71

Gene sequence:

>963_bases
GTGCTCAAGGCACCCCTTAGACTCAACTCCATTGCAAGGCGACTCAATCGCAGTGCGTGCACGCTGTTGCGCGAGATACG
GCGACAGGGCGCACCTGGCTATGCGGCAACCAGCGCAGCCAGCAACTATCGGCTGCGCCGCAGGGCCTGCGTTCGAAGGC
GCCGGCTTGTTGAAGGCAGTGCGCTCTTTCAGCAGGTGCGTGACGACTTGGTTCTGTATCGTTGGTCGCCCCAGCAAATT
GCTGCCAAGCTCAAGGCCATGCATCCGGATGATCCAAGTCAACGCGTGAGCCACGAAACAATCTACACCGCTATCTACGC
GCATCCGCGTGGTGGTTTGAAGAAGGAGCTCGTGGAAGCGCTTCGTCAGCACAAGCCGACGCGCTGCTTGCGCCGTACGA
CCGCTGCCAAGCGCACGTGGGTGCCGGAGGAGCTGCGTATCGTCCATCGGCCTGAAGAGGTGGCGCAGTGCTTGATTCCT
GGGCATTGGGAAGGCGACCTGATCAAAGGGGCTTTCAACCGCTCGTGCGTAGGCACGCTGGTGGAGCGAAAGACGCGCTT
TGTGGTGCTGTGCAAGATGGATGGCTGTACTGCAGAGAATGCGCTGGAGGGCTTCACGCGACAGATGAAGAAGCTGCCGC
ATTGCCTGCTGGGAAGCCTCACCTATGACCGTGGAACCGAGATGACGTGTTATCCAGAGCTGATGAAGCGGCTCAACATC
GACCTGTGGTTCGCCGATCCACATGCGCCCTGGCAGCGCGGCAGCAATGAGAACACCAACGGCCTGCTGTGCCAGTTCAT
GCCCAAAGGCGTGGACTTGTCCAAGGCCAGCCAGGAGTATCTCAACAACGTCGCCGACCTGATGAACGCCCGGCCACGGC
AGACGCTTGGCTGGAAGACCCCAAACCAGGCGCTGGAAGAAGAGATCGCTCAATTCAACTCACGTGTTGCACTTGCAAGT
TGA

Upstream 100 bases:

>100_bases
GAGGGCGGTGGCGCGTCGGGATCTCGCCGCCTCGTAGGGTTGTTGCTTGCTCGGGACACAACCGTATACGCGCCATGGAG
CAGCACAAAAAACAGACAGG

Downstream 100 bases:

>100_bases
GACCCCCCCTGTCTGCCTGTTTCATCATCGCGTCGATGGTATTTCAACGCGATGCGATCTTCGATCGCAACGCCAATGCC
GATCCGATGCCGATCATCGA

Product: ISXoo15 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MLKAPLRLNSIARRLNRSACTLLREIRRQGAPGYAATSAASNYRLRRRACVRRRRLVEGSALFQQVRDDLVLYRWSPQQI
AAKLKAMHPDDPSQRVSHETIYTAIYAHPRGGLKKELVEALRQHKPTRCLRRTTAAKRTWVPEELRIVHRPEEVAQCLIP
GHWEGDLIKGAFNRSCVGTLVERKTRFVVLCKMDGCTAENALEGFTRQMKKLPHCLLGSLTYDRGTEMTCYPELMKRLNI
DLWFADPHAPWQRGSNENTNGLLCQFMPKGVDLSKASQEYLNNVADLMNARPRQTLGWKTPNQALEEEIAQFNSRVALAS

Sequences:

>Translated_320_residues
MLKAPLRLNSIARRLNRSACTLLREIRRQGAPGYAATSAASNYRLRRRACVRRRRLVEGSALFQQVRDDLVLYRWSPQQI
AAKLKAMHPDDPSQRVSHETIYTAIYAHPRGGLKKELVEALRQHKPTRCLRRTTAAKRTWVPEELRIVHRPEEVAQCLIP
GHWEGDLIKGAFNRSCVGTLVERKTRFVVLCKMDGCTAENALEGFTRQMKKLPHCLLGSLTYDRGTEMTCYPELMKRLNI
DLWFADPHAPWQRGSNENTNGLLCQFMPKGVDLSKASQEYLNNVADLMNARPRQTLGWKTPNQALEEEIAQFNSRVALAS
>Mature_320_residues
MLKAPLRLNSIARRLNRSACTLLREIRRQGAPGYAATSAASNYRLRRRACVRRRRLVEGSALFQQVRDDLVLYRWSPQQI
AAKLKAMHPDDPSQRVSHETIYTAIYAHPRGGLKKELVEALRQHKPTRCLRRTTAAKRTWVPEELRIVHRPEEVAQCLIP
GHWEGDLIKGAFNRSCVGTLVERKTRFVVLCKMDGCTAENALEGFTRQMKKLPHCLLGSLTYDRGTEMTCYPELMKRLNI
DLWFADPHAPWQRGSNENTNGLLCQFMPKGVDLSKASQEYLNNVADLMNARPRQTLGWKTPNQALEEEIAQFNSRVALAS

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786450, Length=316, Percent_Identity=34.8101265822785, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI1790736, Length=316, Percent_Identity=34.8101265822785, Blast_Score=171, Evalue=4e-44,
Organism=Escherichia coli, GI1787671, Length=316, Percent_Identity=34.8101265822785, Blast_Score=171, Evalue=4e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 36546; Mature: 36546

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKAPLRLNSIARRLNRSACTLLREIRRQGAPGYAATSAASNYRLRRRACVRRRRLVEGS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALFQQVRDDLVLYRWSPQQIAAKLKAMHPDDPSQRVSHETIYTAIYAHPRGGLKKELVEA
HHHHHHHHCEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCHHHHHHHH
LRQHKPTRCLRRTTAAKRTWVPEELRIVHRPEEVAQCLIPGHWEGDLIKGAFNRSCVGTL
HHHCCHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHCHHHHHHH
VERKTRFVVLCKMDGCTAENALEGFTRQMKKLPHCLLGSLTYDRGTEMTCYPELMKRLNI
HHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCC
DLWFADPHAPWQRGSNENTNGLLCQFMPKGVDLSKASQEYLNNVADLMNARPRQTLGWKT
EEEECCCCCHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PNQALEEEIAQFNSRVALAS
CHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLKAPLRLNSIARRLNRSACTLLREIRRQGAPGYAATSAASNYRLRRRACVRRRRLVEGS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALFQQVRDDLVLYRWSPQQIAAKLKAMHPDDPSQRVSHETIYTAIYAHPRGGLKKELVEA
HHHHHHHHCEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCHHHHHHHH
LRQHKPTRCLRRTTAAKRTWVPEELRIVHRPEEVAQCLIPGHWEGDLIKGAFNRSCVGTL
HHHCCHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHCHHHHHHH
VERKTRFVVLCKMDGCTAENALEGFTRQMKKLPHCLLGSLTYDRGTEMTCYPELMKRLNI
HHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCC
DLWFADPHAPWQRGSNENTNGLLCQFMPKGVDLSKASQEYLNNVADLMNARPRQTLGWKT
EEEECCCCCHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PNQALEEEIAQFNSRVALAS
CHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1334071 [H]