Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
---|---|
Accession | NC_007705 |
Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84622477
Identifier: 84622477
GI number: 84622477
Start: 890883
End: 891131
Strand: Direct
Name: 84622477
Synonym: XOO_0820
Alternate gene names: NA
Gene position: 890883-891131 (Clockwise)
Preceding gene: 84622476
Following gene: 84622478
Centisome position: 18.03
GC content: 58.23
Gene sequence:
>249_bases GTGCTGATGGAAACGCCCCAGTCGGCATGCACCTGCCAAATGGGGCACACACGTTGGCAATCCTTGTCATTCGGAGGATG TATGGCCACCATGAACATTGCTTTGCCTGACGAGCTCCAGCAGTGCGTTGATCCGCAAGTGGCGGAGCATGCTTACGGGC CCGGCAGCGGGTACTTGCGTGCGCTGATGCGCAAGCAACGCGATATTGAACAGCTGCGTGGCGTGTTGCTTGATGGAGCG AACTCCTGA
Upstream 100 bases:
>100_bases CCTGCCGGCTGGATACTGCCGAAGAAGTGTCGATTTACGAAGCAGGCGGCGTGTTGCAGCGGTTTGCGCAGGATTTTCTG GAAGCCTCCGCTGCCTGAGG
Downstream 100 bases:
>100_bases ACGGCAGTGGCGGCCGCTGCCGGCTTCTTCATCGCGATGCGAGAGCGTGCTGACGCGCGTGCCGGCGCGCAGTGAAGCCT GCGCACTGGCGTCCGTTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MLMETPQSACTCQMGHTRWQSLSFGGCMATMNIALPDELQQCVDPQVAEHAYGPGSGYLRALMRKQRDIEQLRGVLLDGA NS
Sequences:
>Translated_82_residues MLMETPQSACTCQMGHTRWQSLSFGGCMATMNIALPDELQQCVDPQVAEHAYGPGSGYLRALMRKQRDIEQLRGVLLDGA NS >Mature_82_residues MLMETPQSACTCQMGHTRWQSLSFGGCMATMNIALPDELQQCVDPQVAEHAYGPGSGYLRALMRKQRDIEQLRGVLLDGA NS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9015; Mature: 9015
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 7.3 %Met (Translated Protein) 12.2 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 7.3 %Met (Mature Protein) 12.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMETPQSACTCQMGHTRWQSLSFGGCMATMNIALPDELQQCVDPQVAEHAYGPGSGYLR CCCCCCCCHHEECCCCHHHHCCCCCCHHHHCCCCCCHHHHHHCCHHHHHHCCCCCHHHHH ALMRKQRDIEQLRGVLLDGANS HHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLMETPQSACTCQMGHTRWQSLSFGGCMATMNIALPDELQQCVDPQVAEHAYGPGSGYLR CCCCCCCCHHEECCCCHHHHCCCCCCHHHHCCCCCCHHHHHHCCHHHHHHCCCCCHHHHH ALMRKQRDIEQLRGVLLDGANS HHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA