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The map label for this gene is 84622469

Identifier: 84622469

GI number: 84622469

Start: 881305

End: 881658

Strand: Direct

Name: 84622469

Synonym: XOO_0812

Alternate gene names: NA

Gene position: 881305-881658 (Clockwise)

Preceding gene: 84622468

Following gene: 84622470

Centisome position: 17.84

GC content: 63.28

Gene sequence:

>354_bases
ATGAGTGCAATGAATGCACGCCAAGGCATTTTGTCGCTGGCGTTGAAAGACAAGCCAGCGCTTTACAGCGCCTACATGCC
GTTCGTGAAAGGCGGCGGCATCTTCGTGCCCACGCCCAAGCGCTACATGCTGGGCGACGAAGTCTTCGTGCTGCTGACCC
TGCCTGACTCCAGCGAGCGCCTGCCGGTGGCCGGCAAGGTCATCTGGACCACGCCCGCTGGCGCCCAGGGCAACCGCCCC
GCCGGCATCGGCGTGCAGTTTCCCGATGGTCCGGAAGGCGAGGCGGTACGCAACAAGATCGAAACGCTGCTGGCAGGGTT
GACGACCTCGGACAAGCCGACGCACACGATGTAA

Upstream 100 bases:

>100_bases
GCGATCTGCTGCGCACCACCGTCCGCGCCGACCTAGCAGTGACGGAATTATTGCTGTCCTGGCGCGAGGGAGAGCGCCAG
CCACGTTCTAGGGGAACTCG

Downstream 100 bases:

>100_bases
GGCTGCGTTTGTGCGGAATGGGTCAGCTCCAGACCGCACTCGGCGCTGGGCTGATCACCGAAGTATCGGCGCTATGCAGA
GCCGGCCCGGGGCACCGCAT

Product: type IV fimbriae assembly protein

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilZ; Type 4 Fimbrial Biogenesis Protein PilZ; Type 4 Fimbrial Biogenesis Protein; Type IV Fimbriae Assembly Protein; Type IV Pilus Assembly Protein PilZ; Type IV Pilus Assembly Protein; Type IV Fimbrial Biogenesis Protein PilZ; Tfp Pilus Assembly Protein PilZ; DNA Polymerase-Related Protein; Type 4 Fimbrial Biogenesis Protein PILZ; Tfp Pilus Assembly Protein; Pilus Biogenesis Protein PilZ; Type Iv Pilus Assembly Pilz; TYPE 4 Pilus Assembly Protein

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSAMNARQGILSLALKDKPALYSAYMPFVKGGGIFVPTPKRYMLGDEVFVLLTLPDSSERLPVAGKVIWTTPAGAQGNRP
AGIGVQFPDGPEGEAVRNKIETLLAGLTTSDKPTHTM

Sequences:

>Translated_117_residues
MSAMNARQGILSLALKDKPALYSAYMPFVKGGGIFVPTPKRYMLGDEVFVLLTLPDSSERLPVAGKVIWTTPAGAQGNRP
AGIGVQFPDGPEGEAVRNKIETLLAGLTTSDKPTHTM
>Mature_116_residues
SAMNARQGILSLALKDKPALYSAYMPFVKGGGIFVPTPKRYMLGDEVFVLLTLPDSSERLPVAGKVIWTTPAGAQGNRPA
GIGVQFPDGPEGEAVRNKIETLLAGLTTSDKPTHTM

Specific function: Unknown

COG id: COG3215

COG function: function code NU; Tfp pilus assembly protein PilZ

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12443; Mature: 12311

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAMNARQGILSLALKDKPALYSAYMPFVKGGGIFVPTPKRYMLGDEVFVLLTLPDSSER
CCCCCCHHHHEEEEECCCCCHHHHHCCEECCCCEECCCCCCEEECCEEEEEEECCCCCCC
LPVAGKVIWTTPAGAQGNRPAGIGVQFPDGPEGEAVRNKIETLLAGLTTSDKPTHTM
CCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SAMNARQGILSLALKDKPALYSAYMPFVKGGGIFVPTPKRYMLGDEVFVLLTLPDSSER
CCCCCHHHHEEEEECCCCCHHHHHCCEECCCCEECCCCCCEEECCEEEEEEECCCCCCC
LPVAGKVIWTTPAGAQGNRPAGIGVQFPDGPEGEAVRNKIETLLAGLTTSDKPTHTM
CCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA