Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is fabH [H]
Identifier: 84622460
GI number: 84622460
Start: 872176
End: 873153
Strand: Direct
Name: fabH [H]
Synonym: XOO_0803
Alternate gene names: 84622460
Gene position: 872176-873153 (Clockwise)
Preceding gene: 84622459
Following gene: 84622461
Centisome position: 17.65
GC content: 62.37
Gene sequence:
>978_bases ATGAGCAAGCGGATCTATTCCAGAATCGCGGGCACGGGTAGCTATTTGCCCGAAAAGGTGTTGACCAACGACGACATGTC GAAGATCGTCGACACCAGCGATGAGTGGATCTTCTCGCGCACTGGTATTCGTGAACGTCACATCGCTGCCGACGACCAGG CCACCAGCGACCTGGCGTATTTCGCCTCGCTGAAGGCGATGGAAGCGGCCGGTGTGACTGCCGACGAGATCGATCTGATC GTCATCGGCACCACCACCCCGGACCTGATATTTCCGTCGACCGCCTGTCTGCTGCAGGCGCGGCTGGGCAACGTCGGTTG CGGTGCAATGGACGTCAACGCTGCCTGTTCGGGGTTTGTCTACGCGCTTAGCGTGGCCGACAAGTTCGTGCGCAGCGGCG ACGCCAAGACCGTGCTGGTGGTTGGCGCAGAAACGCTGACCCGCATCCTCGACTGGACCGACCGCACCACCTGCGTGCTA TTCGGCGATGGTGCCGGCGCGGTGATCCTCAAGGCCGACGAAGAGACCGGTATTCTCAGCACCCACTTGCGTGCCGATGG CAGCAAGAAAGAGCTGCTGTGGGATCCGGTTGGCGTGTCGGTTGGCTTCGGTGAAGGCAAGAATGGCGGCGGCGCGTTGC TGATGAAAGGCAACGACGTCTTCAAATACGCGGTCAAGGCGCTGAACTCGGTGGTCGATGAGACTCTGGCGGCCAACGGC TACGACGCGCACGACCTGGATTGGCTGATTCCACATCAGGCCAATCTGCGCATCATCGAAGCCACCGCCAAGCGGCTGGA CCTGCCGATGGAGCAAGTGGTGGTCACCGTGGATCGCCACGGCAATACTTCCTCGGCGTCGGTGCCGCTGGCATTGGACG AAGCGGTGCGCTCGGGTCGCGTGCAGCGCGGCCAGTTGCTGCTGCTGGAAGCCTTCGGCGGCGGGTTTGCCTGGGGCTCG GCGCTGTTGCGCTACTGA
Upstream 100 bases:
>100_bases AAGAAGATTGATCCGTGGCGCCCGCCGCGTTCGACGCGGCCGGGTGATCTCGCTTCTTCCGGAGCCGCAGGTCACCGCGG CTCTTGCAACAGGGAACAGT
Downstream 100 bases:
>100_bases GGTCGTTGTCTCCTGCATCGGGCAGGCGAACGCGGCCGCCCAGTCGCGTTCGTGCCTCGCGGTCGATGCGCCTGGCGCAT TGGGATGGCGGCATCCTGTT
Product: 3-oxoacyl-(acyl carrier protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MSKRIYSRIAGTGSYLPEKVLTNDDMSKIVDTSDEWIFSRTGIRERHIAADDQATSDLAYFASLKAMEAAGVTADEIDLI VIGTTTPDLIFPSTACLLQARLGNVGCGAMDVNAACSGFVYALSVADKFVRSGDAKTVLVVGAETLTRILDWTDRTTCVL FGDGAGAVILKADEETGILSTHLRADGSKKELLWDPVGVSVGFGEGKNGGGALLMKGNDVFKYAVKALNSVVDETLAANG YDAHDLDWLIPHQANLRIIEATAKRLDLPMEQVVVTVDRHGNTSSASVPLALDEAVRSGRVQRGQLLLLEAFGGGFAWGS ALLRY
Sequences:
>Translated_325_residues MSKRIYSRIAGTGSYLPEKVLTNDDMSKIVDTSDEWIFSRTGIRERHIAADDQATSDLAYFASLKAMEAAGVTADEIDLI VIGTTTPDLIFPSTACLLQARLGNVGCGAMDVNAACSGFVYALSVADKFVRSGDAKTVLVVGAETLTRILDWTDRTTCVL FGDGAGAVILKADEETGILSTHLRADGSKKELLWDPVGVSVGFGEGKNGGGALLMKGNDVFKYAVKALNSVVDETLAANG YDAHDLDWLIPHQANLRIIEATAKRLDLPMEQVVVTVDRHGNTSSASVPLALDEAVRSGRVQRGQLLLLEAFGGGFAWGS ALLRY >Mature_324_residues SKRIYSRIAGTGSYLPEKVLTNDDMSKIVDTSDEWIFSRTGIRERHIAADDQATSDLAYFASLKAMEAAGVTADEIDLIV IGTTTPDLIFPSTACLLQARLGNVGCGAMDVNAACSGFVYALSVADKFVRSGDAKTVLVVGAETLTRILDWTDRTTCVLF GDGAGAVILKADEETGILSTHLRADGSKKELLWDPVGVSVGFGEGKNGGGALLMKGNDVFKYAVKALNSVVDETLAANGY DAHDLDWLIPHQANLRIIEATAKRLDLPMEQVVVTVDRHGNTSSASVPLALDEAVRSGRVQRGQLLLLEAFGGGFAWGSA LLRY
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=321, Percent_Identity=60.1246105919003, Blast_Score=385, Evalue=1e-108,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.180 [H]
Molecular weight: Translated: 34658; Mature: 34527
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRIYSRIAGTGSYLPEKVLTNDDMSKIVDTSDEWIFSRTGIRERHIAADDQATSDLAY CCHHHHHHHCCCCCCCCHHHCCCCCHHHHHCCCCCEEEECCCCCHHCCCCCCCCHHHHHH FASLKAMEAAGVTADEIDLIVIGTTTPDLIFPSTACLLQARLGNVGCGAMDVNAACSGFV HHHHHHHHHCCCCHHHEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEECCHHHHHHH YALSVADKFVRSGDAKTVLVVGAETLTRILDWTDRTTCVLFGDGAGAVILKADEETGILS HHHHHHHHHHHCCCCCEEEEECHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCEEE THLRADGSKKELLWDPVGVSVGFGEGKNGGGALLMKGNDVFKYAVKALNSVVDETLAANG EEEECCCCCCCEEECCCCEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCC YDAHDLDWLIPHQANLRIIEATAKRLDLPMEQVVVTVDRHGNTSSASVPLALDEAVRSGR CCCCCCCEECCCCCCEEEEEEHHHHHCCCHHHEEEEEECCCCCCCCCCCEEHHHHHHCCC VQRGQLLLLEAFGGGFAWGSALLRY CCCCCEEEEEECCCCHHHHHHHHCC >Mature Secondary Structure SKRIYSRIAGTGSYLPEKVLTNDDMSKIVDTSDEWIFSRTGIRERHIAADDQATSDLAY CHHHHHHHCCCCCCCCHHHCCCCCHHHHHCCCCCEEEECCCCCHHCCCCCCCCHHHHHH FASLKAMEAAGVTADEIDLIVIGTTTPDLIFPSTACLLQARLGNVGCGAMDVNAACSGFV HHHHHHHHHCCCCHHHEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCEECCHHHHHHH YALSVADKFVRSGDAKTVLVVGAETLTRILDWTDRTTCVLFGDGAGAVILKADEETGILS HHHHHHHHHHHCCCCCEEEEECHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCEEE THLRADGSKKELLWDPVGVSVGFGEGKNGGGALLMKGNDVFKYAVKALNSVVDETLAANG EEEECCCCCCCEEECCCCEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCC YDAHDLDWLIPHQANLRIIEATAKRLDLPMEQVVVTVDRHGNTSSASVPLALDEAVRSGR CCCCCCCEECCCCCCEEEEEEHHHHHCCCHHHEEEEEECCCCCCCCCCCEEHHHHHHCCC VQRGQLLLLEAFGGGFAWGSALLRY CCCCCEEEEEECCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]