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The map label for this gene is yceD [H]

Identifier: 84622458

GI number: 84622458

Start: 871284

End: 871793

Strand: Direct

Name: yceD [H]

Synonym: XOO_0801

Alternate gene names: 84622458

Gene position: 871284-871793 (Clockwise)

Preceding gene: 84622456

Following gene: 84622459

Centisome position: 17.64

GC content: 60.0

Gene sequence:

>510_bases
ATGTCCGCGAACGTACCCGAAATGCTGGATGCTTGGCGGATGGTCGCAGCGCGCAGGCGCTTCGATGGCCGCATCCCGCT
ATCTGCGATGACCCGTCTGCAGGGAAGTCTTGTCGATACCGAAGGCGAATGTGTCTATTCGCTTCAATTCGATGAGGACA
CCCTGCTCAAGGTCGCCTACGTCGAACTCAGTATCGATGTAGAGCTTCCGCTGGCATGCCAGCGCAGCCTGCAACGTTTC
CTGTACCCGGTGCACGTCAGACAGCGTCTTGGTTTGATCCGTGACGAAGCCGACGAAGCTGCATTGCCGGCCGACTACGA
AGCGTTGTTGGTGCCGGAAGATGGCATGCTGCGGGTCGTCGACATGGTCGAGGACGAGCTGGTGCTGTCAGTACCAGTGG
TGCCGATGGCGCCGGGTAGCGAGGCGATCGACGCCGAATGGGTCCCGACCCAGGAAGAGCAGGACAAGGCCAGTCCGTTC
GCGGCACTGGCAGCGTTGAAGAAACAGTAA

Upstream 100 bases:

>100_bases
GGGGCGGGCAGGGCAGTCTGCCGTCCCATGGGAAGCGCGGCAATCGCATGAATGGAGCTGTTTGACATGGCCGCTGCAGG
TCTTTAACATTTTGCGGCTT

Downstream 100 bases:

>100_bases
CCGCCGCTGTTAAGGGCGGTAAGACAGGTCGACGCGGGCGTAGAGCGTGCTGTTCGACTCAACAGACAAGTTATCGAACT
AAAGGTTGGAGCAATCCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: G30K [H]

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MSANVPEMLDAWRMVAARRRFDGRIPLSAMTRLQGSLVDTEGECVYSLQFDEDTLLKVAYVELSIDVELPLACQRSLQRF
LYPVHVRQRLGLIRDEADEAALPADYEALLVPEDGMLRVVDMVEDELVLSVPVVPMAPGSEAIDAEWVPTQEEQDKASPF
AALAALKKQ

Sequences:

>Translated_169_residues
MSANVPEMLDAWRMVAARRRFDGRIPLSAMTRLQGSLVDTEGECVYSLQFDEDTLLKVAYVELSIDVELPLACQRSLQRF
LYPVHVRQRLGLIRDEADEAALPADYEALLVPEDGMLRVVDMVEDELVLSVPVVPMAPGSEAIDAEWVPTQEEQDKASPF
AALAALKKQ
>Mature_168_residues
SANVPEMLDAWRMVAARRRFDGRIPLSAMTRLQGSLVDTEGECVYSLQFDEDTLLKVAYVELSIDVELPLACQRSLQRFL
YPVHVRQRLGLIRDEADEAALPADYEALLVPEDGMLRVVDMVEDELVLSVPVVPMAPGSEAIDAEWVPTQEEQDKASPFA
ALAALKKQ

Specific function: Unknown

COG id: COG1399

COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0159 [H]

Homologues:

Organism=Escherichia coli, GI1787329, Length=172, Percent_Identity=31.9767441860465, Blast_Score=70, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003772 [H]

Pfam domain/function: PF02620 DUF177 [H]

EC number: NA

Molecular weight: Translated: 18844; Mature: 18713

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSANVPEMLDAWRMVAARRRFDGRIPLSAMTRLQGSLVDTEGECVYSLQFDEDTLLKVAY
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEECCCCCEEEEEECCCCCEEEEEE
VELSIDVELPLACQRSLQRFLYPVHVRQRLGLIRDEADEAALPADYEALLVPEDGMLRVV
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCEEEEECCCCCCHHH
DMVEDELVLSVPVVPMAPGSEAIDAEWVPTQEEQDKASPFAALAALKKQ
HHHCCCEEEECCCEECCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHCC
>Mature Secondary Structure 
SANVPEMLDAWRMVAARRRFDGRIPLSAMTRLQGSLVDTEGECVYSLQFDEDTLLKVAY
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEECCCCCEEEEEECCCCCEEEEEE
VELSIDVELPLACQRSLQRFLYPVHVRQRLGLIRDEADEAALPADYEALLVPEDGMLRVV
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCEEEEECCCCCCHHH
DMVEDELVLSVPVVPMAPGSEAIDAEWVPTQEEQDKASPFAALAALKKQ
HHHCCCEEEECCCEECCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]