Click here to switch to the map view.

The map label for this gene is atpF [H]

Identifier: 84622321

GI number: 84622321

Start: 715884

End: 716354

Strand: Direct

Name: atpF [H]

Synonym: XOO_0664

Alternate gene names: 84622321

Gene position: 715884-716354 (Clockwise)

Preceding gene: 84622320

Following gene: 84622322

Centisome position: 14.49

GC content: 60.72

Gene sequence:

>471_bases
ATGGATATCACCCTTACCATCTTTGCCCAGGCGCTGGCCTTCGCCGGTCTGATCTGGATCGTCGCGACCAAAATCTGGCC
GCCGCTGCTGCAGGCGATCGAAGAGCGTCAGCAAAAGATCGCTGAAGGTCTGGCTGCGGCCGATCGGAGTCAGAAGGATC
TGGCGCAGGCACAGGAAAAGGTCAATGAAGTACTGAAGGACGCCCGCACCAAGGCCAACGAAATCATCGATCAGGCCCAT
GCGCGCGCCAACCAGATCATCGAAGCGGCCAAGCTGGAGGCAATTGCCGAAGCCAACCGTCAGAAAGAACTGGCGCAGAC
CGAAATCGACGCATCCGCCACGCGTGCCCGCGAGGAGCTGCGCAAGCAGGTCTCGGTGCTGGCCGTCAGCGGTGCAGAAA
AGCTGCTCAAGCGCGAAATCGACGCCAACGCCCACAAGGCGCTGCTCGACGAGCTGGCGGCGGAGATTTAA

Upstream 100 bases:

>100_bases
GATGTGGATGCAGCCCTCAGCGGTTGCATCCGCGGATGAAGGTCGGAAAGTGCCGCCCGTGCGGTGGCGCTTTCACCCCT
AAACAGCGATTGAGCGACCC

Downstream 100 bases:

>100_bases
GCGATGAGTCAGGCCCTCACCCTTGCCCGTCCCTACGGCCGTGCCGCGTTTGCGATCGCGCGTGAGGGCGGCACATTCGC
GCCCTGGTCCGATGCGCTGG

Product: F0F1 ATP synthase subunit B

Products: ATP; H+; H2O [C]

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b [H]

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MDITLTIFAQALAFAGLIWIVATKIWPPLLQAIEERQQKIAEGLAAADRSQKDLAQAQEKVNEVLKDARTKANEIIDQAH
ARANQIIEAAKLEAIAEANRQKELAQTEIDASATRAREELRKQVSVLAVSGAEKLLKREIDANAHKALLDELAAEI

Sequences:

>Translated_156_residues
MDITLTIFAQALAFAGLIWIVATKIWPPLLQAIEERQQKIAEGLAAADRSQKDLAQAQEKVNEVLKDARTKANEIIDQAH
ARANQIIEAAKLEAIAEANRQKELAQTEIDASATRAREELRKQVSVLAVSGAEKLLKREIDANAHKALLDELAAEI
>Mature_156_residues
MDITLTIFAQALAFAGLIWIVATKIWPPLLQAIEERQQKIAEGLAAADRSQKDLAQAQEKVNEVLKDARTKANEIIDQAH
ARANQIIEAAKLEAIAEANRQKELAQTEIDASATRAREELRKQVSVLAVSGAEKLLKREIDANAHKALLDELAAEI

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) [H]

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family [H]

Homologues:

Organism=Escherichia coli, GI1790174, Length=156, Percent_Identity=46.1538461538462, Blast_Score=131, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002146
- InterPro:   IPR005864 [H]

Pfam domain/function: PF00430 ATP-synt_B [H]

EC number: 3.6.3.14 [C]

Molecular weight: Translated: 17140; Mature: 17140

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDITLTIFAQALAFAGLIWIVATKIWPPLLQAIEERQQKIAEGLAAADRSQKDLAQAQEK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VNEVLKDARTKANEIIDQAHARANQIIEAAKLEAIAEANRQKELAQTEIDASATRAREEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKQVSVLAVSGAEKLLKREIDANAHKALLDELAAEI
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MDITLTIFAQALAFAGLIWIVATKIWPPLLQAIEERQQKIAEGLAAADRSQKDLAQAQEK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VNEVLKDARTKANEIIDQAHARANQIIEAAKLEAIAEANRQKELAQTEIDASATRAREEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKQVSVLAVSGAEKLLKREIDANAHKALLDELAAEI
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ADP; H+; Phosphate [C]

Specific reaction: ADP + (4) H+ + Phosphate <==> ATP + (3) H+ + H2O [C]

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]