Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is sam [H]
Identifier: 84622305
GI number: 84622305
Start: 700804
End: 701700
Strand: Direct
Name: sam [H]
Synonym: XOO_0648
Alternate gene names: 84622305
Gene position: 700804-701700 (Clockwise)
Preceding gene: 84622299
Following gene: 84622306
Centisome position: 14.19
GC content: 69.34
Gene sequence:
>897_bases ATGCCCACCACCCGCTCTCCGCTTCCCGCCATCGCCTGGATGGTGGTCGCCGTGGCCTGCTTCTCGCTGATGGATGCGGG AATGAAACTGCTCTCGGCGCATTACCCACCGCTGCAGGTCACCTTGTTGCGCGGTGCCGCCTCGCTGCCGTTCGTGCTGG TGTGGGTGTTCGCCACCGCCGGTCCGCGCGCGATCGTGCCGGTGCGCTGGGGCCTGCATCTGCTGCGCGGGGCGCTGGGC ATGGTGATGATCGGCTGCTTCGTCTATGGCTTGAAGCGCATGCCGCTGTCCACCGCGTACACGCTGTACTTCGTTGCGCC GCTGCTGGTGGCCGCGCTGTCGGTGCCGCTGCTGGGCGAGCATGTGGGCCCGCGTCGCTGGGCCGCGATTGGCATTGGCC TGGTCGGGGTGATCGTGGTACTGCGCCCGGGCGTGGACGGGCTGATCTCGCTGCCCGGCCTGATGGTGCTGCTGGCAGCC ACGGCCTACGCCGTCGCGGCGATCACCGTGAGCCTGCTGACCCGCACCGACACCCCGCAAGCCATGGTGGTGTGGTTTCT GCTGTTTATGGCGATCGGCGCCGGGCTGCTGGCCATCCCCGGCTGGGTGCCGCTACACGCCGGGCACGCCGGGTTGATCG CCGGCATGGGCCTGGCCGGTGCGCTGGGCCAGGTCGCGCTGACCCAGGCCTTCATGCGCGGCGAGGCTTCGATGATCGCC CCGCTGGAATACACCGCCCTGGTCTGGGTGATCGGCTGGGACTGGCTGTTGTGGCAGACCCTGCCCGACAGCTGGACCTG GACCGGCGCCGGCATCATCGTTGCCAGCGGGCTGTATTTGTTGCGCCGGGAGCCGATACGCAGGGCTGACCGTCCACCGC CGCTGGATAGGCCGTGA
Upstream 100 bases:
>100_bases TCCTGCAATTGAAAAGCAGCAGCCATTCTAGGGCATCGTGCCGGCCCGGCCGTCATCCGGGCATTGGCGGGCGTGGCAGC GCCGTGGCGATAATGCGCGC
Downstream 100 bases:
>100_bases GGACGAGATTCGAGATTCGGCATTCGGGATTGGCAACAGCGGGGACGCCGTTGTCCTTGCGAATCCCCAATCTCCAATCC CGATGGTAGGCTTCACGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MPTTRSPLPAIAWMVVAVACFSLMDAGMKLLSAHYPPLQVTLLRGAASLPFVLVWVFATAGPRAIVPVRWGLHLLRGALG MVMIGCFVYGLKRMPLSTAYTLYFVAPLLVAALSVPLLGEHVGPRRWAAIGIGLVGVIVVLRPGVDGLISLPGLMVLLAA TAYAVAAITVSLLTRTDTPQAMVVWFLLFMAIGAGLLAIPGWVPLHAGHAGLIAGMGLAGALGQVALTQAFMRGEASMIA PLEYTALVWVIGWDWLLWQTLPDSWTWTGAGIIVASGLYLLRREPIRRADRPPPLDRP
Sequences:
>Translated_298_residues MPTTRSPLPAIAWMVVAVACFSLMDAGMKLLSAHYPPLQVTLLRGAASLPFVLVWVFATAGPRAIVPVRWGLHLLRGALG MVMIGCFVYGLKRMPLSTAYTLYFVAPLLVAALSVPLLGEHVGPRRWAAIGIGLVGVIVVLRPGVDGLISLPGLMVLLAA TAYAVAAITVSLLTRTDTPQAMVVWFLLFMAIGAGLLAIPGWVPLHAGHAGLIAGMGLAGALGQVALTQAFMRGEASMIA PLEYTALVWVIGWDWLLWQTLPDSWTWTGAGIIVASGLYLLRREPIRRADRPPPLDRP >Mature_297_residues PTTRSPLPAIAWMVVAVACFSLMDAGMKLLSAHYPPLQVTLLRGAASLPFVLVWVFATAGPRAIVPVRWGLHLLRGALGM VMIGCFVYGLKRMPLSTAYTLYFVAPLLVAALSVPLLGEHVGPRRWAAIGIGLVGVIVVLRPGVDGLISLPGLMVLLAAT AYAVAAITVSLLTRTDTPQAMVVWFLLFMAIGAGLLAIPGWVPLHAGHAGLIAGMGLAGALGQVALTQAFMRGEASMIAP LEYTALVWVIGWDWLLWQTLPDSWTWTGAGIIVASGLYLLRREPIRRADRPPPLDRP
Specific function: Transports S-adenosylmethionine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31793; Mature: 31662
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTRSPLPAIAWMVVAVACFSLMDAGMKLLSAHYPPLQVTLLRGAASLPFVLVWVFATA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCC GPRAIVPVRWGLHLLRGALGMVMIGCFVYGLKRMPLSTAYTLYFVAPLLVAALSVPLLGE CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHC HVGPRRWAAIGIGLVGVIVVLRPGVDGLISLPGLMVLLAATAYAVAAITVSLLTRTDTPQ CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH AMVVWFLLFMAIGAGLLAIPGWVPLHAGHAGLIAGMGLAGALGQVALTQAFMRGEASMIA HHHHHHHHHHHHCCCHHHCCCCCEECCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEC PLEYTALVWVIGWDWLLWQTLPDSWTWTGAGIIVASGLYLLRREPIRRADRPPPLDRP CHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCC >Mature Secondary Structure PTTRSPLPAIAWMVVAVACFSLMDAGMKLLSAHYPPLQVTLLRGAASLPFVLVWVFATA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCC GPRAIVPVRWGLHLLRGALGMVMIGCFVYGLKRMPLSTAYTLYFVAPLLVAALSVPLLGE CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHC HVGPRRWAAIGIGLVGVIVVLRPGVDGLISLPGLMVLLAATAYAVAAITVSLLTRTDTPQ CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH AMVVWFLLFMAIGAGLLAIPGWVPLHAGHAGLIAGMGLAGALGQVALTQAFMRGEASMIA HHHHHHHHHHHHCCCHHHCCCCCEECCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEC PLEYTALVWVIGWDWLLWQTLPDSWTWTGAGIIVASGLYLLRREPIRRADRPPPLDRP CHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA