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The map label for this gene is rsmC [H]

Identifier: 84622297

GI number: 84622297

Start: 693099

End: 694166

Strand: Direct

Name: rsmC [H]

Synonym: XOO_0640

Alternate gene names: 84622297

Gene position: 693099-694166 (Clockwise)

Preceding gene: 84622294

Following gene: 84622298

Centisome position: 14.03

GC content: 68.16

Gene sequence:

>1068_bases
ATGGCTGGCCCGCACGATGCCCCGCTTCAAGCCCTGTTCCTGCCCTTCGCCCAAGGCGTGCTGCCGTGGTCGGAGGGGCC
GGTGCTGTTCCTGCGCGCACGCGACGGTTTCCCGCTGCGCGAGCAGGCGGTGGCCGAGACGCTGACCTGCGAGCAGAGCT
TCCGCCCGTTCGCCGAAGCGCTGGAGCGTAACGGCTGGAACGTGCGTGAAGAAAGCGAGATCGAGGCCGACAGCACGCGC
TATGCACTGGTGCTGGTGCTGCCGCCGCGGCAGCGCGAAGAAGCGCGCGCCCTGTTCGCACGTGCGGTGGCGCTGACTGC
GCCCGGTGGCCGCGTGGTGGCCTGTCAGTCCAACAACGAAGGCGCGCGCTCGGGTGAAGCCGATCTGCGCCAGCTCACCG
GGCTGGCAGGTAGCCTGACCAAACACCACTGCCGCACCTACTGGACTGCGCCGCTGCCGGCCGACACCGACGCCACGCTG
CAGGCGCGCTGGGCAGCGCTGGATGCGCCACGCAAGATCCTGGACGGCCGCTTTGTCAGCCGTCCCGGTGTATTCGCCTG
GGATCGCATCGACCCGGCATCGGCGCTGCTGGTCGAGCATCTGCCCACCACGCTGGCTGGTCATGGCGCCGATCTGGGCG
CAGGCTTCGGTTATCTATCGGCCGAAGTGCTGGCGCGGTGCCCCAAGGTCACTGTGCTGGATCTGTACGAAGCCCAGGCG
CGCGCGCTGACGCTGGCGCGGCGCAATCTGCAGGGCATCACGCATCCGGCGCAGCTGCACTACCACTGGCGCGATGTCAC
CGCCGGGCTGGTGGCGCACTACGATTTCATCGTCAGCAATCCGCCTTTCCATACACCCTCGCGTGCCGACCGCCCGGATA
TCGGCCAACGCTTCATCGCGGTGGCTGCACAGGCGCTGCGCCCGGGCGGGCAACTGTTGTTGGTGGCCAACCGGCATTTG
CCCTACGAACAGGTGCTCAACGAAAGTTTCGGGCAGGTGCGCGTGGCTGCAGAGCGCGATGGTTTCAAGCTGATCTCGGC
CATCCGCGGCCGTGGAGCGCGCGCATGA

Upstream 100 bases:

>100_bases
TGTGTGCGCATCAATAGTCCGTATAGACATTGGAAGGCGCGCGCCGGGCATTTGACACAGGTCACTTACAATGGCGGCCT
GTTCCCGACCCGATGATCCG

Downstream 100 bases:

>100_bases
AGCTGGTCAAACATATCGCCAATCTCGGTTATGGCAGCCGTAAGCAGGTGACCCAGCTGTTTCGACAGGGCGCGGTCACC
GATGCGCAGGGCGAGGTGCT

Product: ribosomal RNA small subunit methyltransferase C

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MAGPHDAPLQALFLPFAQGVLPWSEGPVLFLRARDGFPLREQAVAETLTCEQSFRPFAEALERNGWNVREESEIEADSTR
YALVLVLPPRQREEARALFARAVALTAPGGRVVACQSNNEGARSGEADLRQLTGLAGSLTKHHCRTYWTAPLPADTDATL
QARWAALDAPRKILDGRFVSRPGVFAWDRIDPASALLVEHLPTTLAGHGADLGAGFGYLSAEVLARCPKVTVLDLYEAQA
RALTLARRNLQGITHPAQLHYHWRDVTAGLVAHYDFIVSNPPFHTPSRADRPDIGQRFIAVAAQALRPGGQLLLVANRHL
PYEQVLNESFGQVRVAAERDGFKLISAIRGRGARA

Sequences:

>Translated_355_residues
MAGPHDAPLQALFLPFAQGVLPWSEGPVLFLRARDGFPLREQAVAETLTCEQSFRPFAEALERNGWNVREESEIEADSTR
YALVLVLPPRQREEARALFARAVALTAPGGRVVACQSNNEGARSGEADLRQLTGLAGSLTKHHCRTYWTAPLPADTDATL
QARWAALDAPRKILDGRFVSRPGVFAWDRIDPASALLVEHLPTTLAGHGADLGAGFGYLSAEVLARCPKVTVLDLYEAQA
RALTLARRNLQGITHPAQLHYHWRDVTAGLVAHYDFIVSNPPFHTPSRADRPDIGQRFIAVAAQALRPGGQLLLVANRHL
PYEQVLNESFGQVRVAAERDGFKLISAIRGRGARA
>Mature_354_residues
AGPHDAPLQALFLPFAQGVLPWSEGPVLFLRARDGFPLREQAVAETLTCEQSFRPFAEALERNGWNVREESEIEADSTRY
ALVLVLPPRQREEARALFARAVALTAPGGRVVACQSNNEGARSGEADLRQLTGLAGSLTKHHCRTYWTAPLPADTDATLQ
ARWAALDAPRKILDGRFVSRPGVFAWDRIDPASALLVEHLPTTLAGHGADLGAGFGYLSAEVLARCPKVTVLDLYEAQAR
ALTLARRNLQGITHPAQLHYHWRDVTAGLVAHYDFIVSNPPFHTPSRADRPDIGQRFIAVAAQALRPGGQLLLVANRHLP
YEQVLNESFGQVRVAAERDGFKLISAIRGRGARA

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

Organism=Escherichia coli, GI1790830, Length=267, Percent_Identity=29.9625468164794, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI87082206, Length=191, Percent_Identity=25.6544502617801, Blast_Score=68, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR002296
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 38831; Mature: 38699

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGPHDAPLQALFLPFAQGVLPWSEGPVLFLRARDGFPLREQAVAETLTCEQSFRPFAEA
CCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
LERNGWNVREESEIEADSTRYALVLVLPPRQREEARALFARAVALTAPGGRVVACQSNNE
HHCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHEEECCCCEEEEECCCCC
GARSGEADLRQLTGLAGSLTKHHCRTYWTAPLPADTDATLQARWAALDAPRKILDGRFVS
CCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHCCHHHHCCCEEC
RPGVFAWDRIDPASALLVEHLPTTLAGHGADLGAGFGYLSAEVLARCPKVTVLDLYEAQA
CCCCEEECCCCHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEHHHHHHH
RALTLARRNLQGITHPAQLHYHWRDVTAGLVAHYDFIVSNPPFHTPSRADRPDIGQRFIA
HHHHHHHHHHCCCCCHHHEEEEHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHH
VAAQALRPGGQLLLVANRHLPYEQVLNESFGQVRVAAERDGFKLISAIRGRGARA
HHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCC
>Mature Secondary Structure 
AGPHDAPLQALFLPFAQGVLPWSEGPVLFLRARDGFPLREQAVAETLTCEQSFRPFAEA
CCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
LERNGWNVREESEIEADSTRYALVLVLPPRQREEARALFARAVALTAPGGRVVACQSNNE
HHCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHEEECCCCEEEEECCCCC
GARSGEADLRQLTGLAGSLTKHHCRTYWTAPLPADTDATLQARWAALDAPRKILDGRFVS
CCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHCCHHHHCCCEEC
RPGVFAWDRIDPASALLVEHLPTTLAGHGADLGAGFGYLSAEVLARCPKVTVLDLYEAQA
CCCCEEECCCCHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEHHHHHHH
RALTLARRNLQGITHPAQLHYHWRDVTAGLVAHYDFIVSNPPFHTPSRADRPDIGQRFIA
HHHHHHHHHHCCCCCHHHEEEEHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHH
VAAQALRPGGQLLLVANRHLPYEQVLNESFGQVRVAAERDGFKLISAIRGRGARA
HHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA