Click here to switch to the map view.

The map label for this gene is 84622266

Identifier: 84622266

GI number: 84622266

Start: 660760

End: 662208

Strand: Direct

Name: 84622266

Synonym: XOO_0609

Alternate gene names: NA

Gene position: 660760-662208 (Clockwise)

Preceding gene: 84622265

Following gene: 84622268

Centisome position: 13.38

GC content: 65.15

Gene sequence:

>1449_bases
ATGTTCAGCGCTGAGGTGGAACCACCGTGGAGTTTTGAAGCGTGGCGTGCGTTGGCGCGGGCGGGCTGGTGCGCGCAGGC
AGAGCCGGATGATGTGGCCTGGAACGGCGGTGCGCAGGGCGGGCTGTTGATGGGGCAGGGGCTGCTGGAACTGCCGGCCG
TGGTGCCGCCACCCCGTGTCTCGGCAGACTTCATGCAGCTGGCGGCATCGGTGCTGTGTCATCGCGATCCACAGCGGCAC
GCCGTGCTGTACCGCTTGTTGTGGCGGGTTGCCTGCGGCGAGAAAGCATTGCTGGAACGCGCCACCGATGTGGATGTGCA
CCGGCTGCGGCAATGGCAGAAGGCAGTGCAGCGCGATACGCACAAAATGAAGGCCTTCGTGCGCTTCCGCCGCTTGCCCG
GGGAAGAGGAAGACTTCGTTGCCTGGTTCGAGCCCGAGCACTGGATCGTGGACCGGGTAGCGCCGTTTTTCGCACGCCGT
TTTGCCGGCATGCGCTGGGCGATCTTGACCCCGTATCGCAGCGTGCGTTGGGATGGCGAGGCGTTGAGCTTCGGCGCAGG
TGCGGGGCGCACGCAGGTGCCGGCCGACGATGCGCAGGAAGCACTGTGGCGCACCTATTACGCACATATCTTCAACCCGG
CGCGGCTCAACCAGACCATGATGCGGCAGGAAATGCCGCAGAAATATTGGAAGAACCTGCCCGAAGCAGCGTCGCTGCCG
GAACTGATCCGCGAAGCCGGTGTGCGCGTGCGCGAGATGGCCGAACGCGCGCCTGAGCCAGTGCGGCGACGGGTACCGGC
GGCGCCTGCGCCACAGCCGGATACGACAACCCACAGCCTGGCGCAGTTGCGCAGCGCTGCACGCGATTGCCGGCGTTGCG
AATTGTGGCAACCGGCGACGCAGACGGTATTCGGCGAGGGGCCCGACGATGCATCGGTGATGGTGATCGGCGAGCAGCCA
GGCGATGAAGAGGATTTAAGCGGGCGCCCGTTCGTCGGGCCCGCCGGGCGCCTGTTCACCATGGCGCTGGGCGAGCTGGG
TGTCGATCGCCAGAGGTTCTACGTGACCAATGCAGTCAAGCATTTCCGTTTCGAACAACGCGGTAAACGGCGGCTGCACC
GCAACCCGGAGCGCGCGCACTTGCAGGCATGCAGTGGGTGGTTGCAGGCCGAACGCACGCAATTGCGTCCAGCGCAGATC
GTCTGCCTGGGTGCGACTGCGGCGCAGGCGGTATTGGGAAGAAGCGGCTTCCGATTGATGCAGGAACGCGGGCAGTGGCA
GCGCCTGGACGATGGCACGCCGGTCTTGACCACGGTGCATCCGTCCTGGGTGTTGCGGCAGCCATCGACGGATGCACGCG
AAGAAGGCTATCGCGGATTTGTCGAAGATCTGCGTCAGTTGCTGAACCCACCGCAGCCGCGGGAACGATCGTTCGAGAGA
GAAAGGTAA

Upstream 100 bases:

>100_bases
GCTCGATCATCATCCGCGCCAACGGCTGGACGATCCGGTCAGGTTGCGTGCGCAGTTGGCGCCAGCGCCGCGGCAGGCGA
GCCTGTTCGACTGACTTGCC

Downstream 100 bases:

>100_bases
CGCGCGGCGCAGGCAAAAAAATACGCGTGCAACGGCACGCGCACGGTGTCGGAGAATCGTGACACCAAGTGGAGCCACCG
GCACGCCGGCGACGCCATCG

Product: DNA polymerase related protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; DNA Polymerase Related Protein; Uracil-DNA Glycosylase Superfamily Protein; Uracil DNA Glycosylase Superfamily Protein; Phage SPO1 DNA Polymerase-Like Protein; Uracil-DNA Glycosylase Superfamily; DNA Polymerase; DNA Polymerase Bacteriophage-Type; DNA-Directed DNA Polymerase Protein; Phage Spo1 DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase; Uracil-DNA Glycosylase Family 4 Protein; Helicase/Glycosylase; Uracil DNA Glycosylase Superfamily; Phage SPO1 DNA Polymerase Domain-Containing Protein; Phage Shock Protein E; Phage DNA Polymerase; Phage SPO1 DNA Polymerase; Phage Spo1 DNA Polymerase Domain Protein; DNA Polymerase-Related Protein; Phage Related DNA Polymerase; Uracil-DNA Glycosylase-Like Protein; Uracil DNA Glycosylase Family Protein; Transcriptional Regulator Fis Family; Phage SpO1 DNA Polymerase-Related Protein; Uracil DNA Glycosylase Protein; N-Terminus Of Phage SPO1 DNA Polymerase; Uracil DNA Glycosylase; Fis Family Transcriptional Regulator; DNA Polymerase-Like Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; Leucyl-TRNA Synthetase

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MFSAEVEPPWSFEAWRALARAGWCAQAEPDDVAWNGGAQGGLLMGQGLLELPAVVPPPRVSADFMQLAASVLCHRDPQRH
AVLYRLLWRVACGEKALLERATDVDVHRLRQWQKAVQRDTHKMKAFVRFRRLPGEEEDFVAWFEPEHWIVDRVAPFFARR
FAGMRWAILTPYRSVRWDGEALSFGAGAGRTQVPADDAQEALWRTYYAHIFNPARLNQTMMRQEMPQKYWKNLPEAASLP
ELIREAGVRVREMAERAPEPVRRRVPAAPAPQPDTTTHSLAQLRSAARDCRRCELWQPATQTVFGEGPDDASVMVIGEQP
GDEEDLSGRPFVGPAGRLFTMALGELGVDRQRFYVTNAVKHFRFEQRGKRRLHRNPERAHLQACSGWLQAERTQLRPAQI
VCLGATAAQAVLGRSGFRLMQERGQWQRLDDGTPVLTTVHPSWVLRQPSTDAREEGYRGFVEDLRQLLNPPQPRERSFER
ER

Sequences:

>Translated_482_residues
MFSAEVEPPWSFEAWRALARAGWCAQAEPDDVAWNGGAQGGLLMGQGLLELPAVVPPPRVSADFMQLAASVLCHRDPQRH
AVLYRLLWRVACGEKALLERATDVDVHRLRQWQKAVQRDTHKMKAFVRFRRLPGEEEDFVAWFEPEHWIVDRVAPFFARR
FAGMRWAILTPYRSVRWDGEALSFGAGAGRTQVPADDAQEALWRTYYAHIFNPARLNQTMMRQEMPQKYWKNLPEAASLP
ELIREAGVRVREMAERAPEPVRRRVPAAPAPQPDTTTHSLAQLRSAARDCRRCELWQPATQTVFGEGPDDASVMVIGEQP
GDEEDLSGRPFVGPAGRLFTMALGELGVDRQRFYVTNAVKHFRFEQRGKRRLHRNPERAHLQACSGWLQAERTQLRPAQI
VCLGATAAQAVLGRSGFRLMQERGQWQRLDDGTPVLTTVHPSWVLRQPSTDAREEGYRGFVEDLRQLLNPPQPRERSFER
ER
>Mature_482_residues
MFSAEVEPPWSFEAWRALARAGWCAQAEPDDVAWNGGAQGGLLMGQGLLELPAVVPPPRVSADFMQLAASVLCHRDPQRH
AVLYRLLWRVACGEKALLERATDVDVHRLRQWQKAVQRDTHKMKAFVRFRRLPGEEEDFVAWFEPEHWIVDRVAPFFARR
FAGMRWAILTPYRSVRWDGEALSFGAGAGRTQVPADDAQEALWRTYYAHIFNPARLNQTMMRQEMPQKYWKNLPEAASLP
ELIREAGVRVREMAERAPEPVRRRVPAAPAPQPDTTTHSLAQLRSAARDCRRCELWQPATQTVFGEGPDDASVMVIGEQP
GDEEDLSGRPFVGPAGRLFTMALGELGVDRQRFYVTNAVKHFRFEQRGKRRLHRNPERAHLQACSGWLQAERTQLRPAQI
VCLGATAAQAVLGRSGFRLMQERGQWQRLDDGTPVLTTVHPSWVLRQPSTDAREEGYRGFVEDLRQLLNPPQPRERSFER
ER

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 55018; Mature: 55018

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSAEVEPPWSFEAWRALARAGWCAQAEPDDVAWNGGAQGGLLMGQGLLELPAVVPPPRV
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCCC
SADFMQLAASVLCHRDPQRHAVLYRLLWRVACGEKALLERATDVDVHRLRQWQKAVQRDT
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
HKMKAFVRFRRLPGEEEDFVAWFEPEHWIVDRVAPFFARRFAGMRWAILTPYRSVRWDGE
HHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCC
ALSFGAGAGRTQVPADDAQEALWRTYYAHIFNPARLNQTMMRQEMPQKYWKNLPEAASLP
CEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ELIREAGVRVREMAERAPEPVRRRVPAAPAPQPDTTTHSLAQLRSAARDCRRCELWQPAT
HHHHHHCHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHH
QTVFGEGPDDASVMVIGEQPGDEEDLSGRPFVGPAGRLFTMALGELGVDRQRFYVTNAVK
HHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
HFRFEQRGKRRLHRNPERAHLQACSGWLQAERTQLRPAQIVCLGATAAQAVLGRSGFRLM
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHH
QERGQWQRLDDGTPVLTTVHPSWVLRQPSTDAREEGYRGFVEDLRQLLNPPQPRERSFER
HHCCCCCCCCCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCC
ER
CC
>Mature Secondary Structure
MFSAEVEPPWSFEAWRALARAGWCAQAEPDDVAWNGGAQGGLLMGQGLLELPAVVPPPRV
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCCC
SADFMQLAASVLCHRDPQRHAVLYRLLWRVACGEKALLERATDVDVHRLRQWQKAVQRDT
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
HKMKAFVRFRRLPGEEEDFVAWFEPEHWIVDRVAPFFARRFAGMRWAILTPYRSVRWDGE
HHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCC
ALSFGAGAGRTQVPADDAQEALWRTYYAHIFNPARLNQTMMRQEMPQKYWKNLPEAASLP
CEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH
ELIREAGVRVREMAERAPEPVRRRVPAAPAPQPDTTTHSLAQLRSAARDCRRCELWQPAT
HHHHHHCHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHH
QTVFGEGPDDASVMVIGEQPGDEEDLSGRPFVGPAGRLFTMALGELGVDRQRFYVTNAVK
HHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
HFRFEQRGKRRLHRNPERAHLQACSGWLQAERTQLRPAQIVCLGATAAQAVLGRSGFRLM
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHH
QERGQWQRLDDGTPVLTTVHPSWVLRQPSTDAREEGYRGFVEDLRQLLNPPQPRERSFER
HHCCCCCCCCCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCC
ER
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA