Click here to switch to the map view.

The map label for this gene is 84622224

Identifier: 84622224

GI number: 84622224

Start: 616675

End: 617172

Strand: Direct

Name: 84622224

Synonym: XOO_0567

Alternate gene names: NA

Gene position: 616675-617172 (Clockwise)

Preceding gene: 84622217

Following gene: 84622225

Centisome position: 12.48

GC content: 64.66

Gene sequence:

>498_bases
GTGGCGCAGCAAGTTCGGCGGCATGAGCGTGCCCGATGCCAAGCGGTTCAAGGACCTGGAGGCCGAGAACACGCGACTGA
AGAAGTTGCTGGCCGAGCAGGTGTTTCAGAACGACCTGATCAAGGATGCGCTGCAAAAACAATGGTGAGCGCACCGGCGC
GTCGTACGCTGGTGCGCGAGTGGATCGAAGGTGGCGCCAGCGAGCGCTGCGCCCTGGCAGCGATCGGCATGAGCGCCAGT
GCGCTGCGCTATCGCCCGGGCGAGGACCGCAACGTTGAGTTGCGCGAGCGCATCCTTGCGTTGGCGCATCGCCATCGCCG
CTATGGCGTGGGGATGATCTCTCTCAAGCTGCGGCAGGAAGGGCGTCTCGTGAACTATAAGCGGGTGGAGCGGCTGTATT
GCGAGCAGCAGCTGCAAGTCCGGCGCCGCACGCGTAAAAAGGTGCCGGTAGGCGAGCGTGCACCGTTGCTGCGGCCCACC
AAGGCCAACCCGGTGTGA

Upstream 100 bases:

>100_bases
TTCCGAAGAGCAGATCATCGGCTTCCTGCGCGAAGCCGAGGCCGGCATGCCGATCAGACCTGTGCCGACGGCATGGCTTC
AGTGAGGCTTCCTACTACCT

Downstream 100 bases:

>100_bases
TCCATGGACGTCGTGTTCGACCGCACCGCCGAAGGCAGGGCAATCAAATGCCTGGTGATCGTGGACGACACAACCCATGA
AGCGGTCGCCATCGACGTGG

Product: ISXoo3 transposase orfB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MAQQVRRHERARCQAVQGPGGREHATEEVAGRAGVSERPDQGCAAKTMVSAPARRTLVREWIEGGASERCALAAIGMSAS
ALRYRPGEDRNVELRERILALAHRHRRYGVGMISLKLRQEGRLVNYKRVERLYCEQQLQVRRRTRKKVPVGERAPLLRPT
KANPV

Sequences:

>Translated_165_residues
MAQQVRRHERARCQAVQGPGGREHATEEVAGRAGVSERPDQGCAAKTMVSAPARRTLVREWIEGGASERCALAAIGMSAS
ALRYRPGEDRNVELRERILALAHRHRRYGVGMISLKLRQEGRLVNYKRVERLYCEQQLQVRRRTRKKVPVGERAPLLRPT
KANPV
>Mature_164_residues
AQQVRRHERARCQAVQGPGGREHATEEVAGRAGVSERPDQGCAAKTMVSAPARRTLVREWIEGGASERCALAAIGMSASA
LRYRPGEDRNVELRERILALAHRHRRYGVGMISLKLRQEGRLVNYKRVERLYCEQQLQVRRRTRKKVPVGERAPLLRPTK
ANPV

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 18641; Mature: 18510

Theoretical pI: Translated: 11.68; Mature: 11.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQQVRRHERARCQAVQGPGGREHATEEVAGRAGVSERPDQGCAAKTMVSAPARRTLVRE
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCHHHHHHHHH
WIEGGASERCALAAIGMSASALRYRPGEDRNVELRERILALAHRHRRYGVGMISLKLRQE
HHHCCCCCCHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCC
GRLVNYKRVERLYCEQQLQVRRRTRKKVPVGERAPLLRPTKANPV
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AQQVRRHERARCQAVQGPGGREHATEEVAGRAGVSERPDQGCAAKTMVSAPARRTLVRE
CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCHHHHHHHHH
WIEGGASERCALAAIGMSASALRYRPGEDRNVELRERILALAHRHRRYGVGMISLKLRQE
HHHCCCCCCHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCC
GRLVNYKRVERLYCEQQLQVRRRTRKKVPVGERAPLLRPTKANPV
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2152895 [H]