Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622188
Identifier: 84622188
GI number: 84622188
Start: 579474
End: 580007
Strand: Direct
Name: 84622188
Synonym: XOO_0531
Alternate gene names: NA
Gene position: 579474-580007 (Clockwise)
Preceding gene: 84622187
Following gene: 84622190
Centisome position: 11.73
GC content: 69.48
Gene sequence:
>534_bases ATGCCGATGCCGCTGGAAGAAGCCAGCGCTGCACCGTCGGCATCCACGCCGGCTGCCCCAGTATCGAGCACAACCCCGAG CGCCGCGCAGCAACGCGCGCGCTGGGAGGCGATGACGCCCGCGCAGCAGGCCGAGCTGCGCGCGCGCTACGCCGCCTGGA AGGGGCTGACTGCAACCGACCGCGTAGTGCTGCGTCATGCACGCGAGCGTCTGCAGGCTTTGCCTGAGGATCAGCAACGC GCGTTGCACACGCAATTCGGCGCGATGGATCGCCTGCATCGCGACGGCTGGCGCCTGGGCTCGCAGGTGGGAGCGTTCTA TGCGCAATTACAGCCCCTGATCGGCTACGTGCCGCCGGCCCAGCGCGACGCCATGCTGGCCGCGCTGCGCAGCCTGGATG CCGGCCAGCTGGAGCAACTGGCAGTGCTGGCACAGCGCACCCCGTCCCAGGAGCGCGATGGTTTGCGCGATGCCTTCCTC GTCCAAGCACCGGCCACCCGCAGCACATGGTTGAAGCGGCAGCTGGCGCGTTGA
Upstream 100 bases:
>100_bases GAGCAGCCTTCCGCCCCGCTGGAGACGGTCGATGATGAAGCCAACTAACTGGTGCGGCCTGTTGCTCTGCGCGATTGCAG GCATTACCGGCGCGCAGACA
Downstream 100 bases:
>100_bases TCGGTCGCGGCAGGATTTTGGCGCGGTAGGCGTGCGCGCCATGTTTAAGCTTGCGCGCGCGGCATTGGTGGAAGCGGCTG TTGGCGTCAGATAGCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase Protein
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MPMPLEEASAAPSASTPAAPVSSTTPSAAQQRARWEAMTPAQQAELRARYAAWKGLTATDRVVLRHARERLQALPEDQQR ALHTQFGAMDRLHRDGWRLGSQVGAFYAQLQPLIGYVPPAQRDAMLAALRSLDAGQLEQLAVLAQRTPSQERDGLRDAFL VQAPATRSTWLKRQLAR
Sequences:
>Translated_177_residues MPMPLEEASAAPSASTPAAPVSSTTPSAAQQRARWEAMTPAQQAELRARYAAWKGLTATDRVVLRHARERLQALPEDQQR ALHTQFGAMDRLHRDGWRLGSQVGAFYAQLQPLIGYVPPAQRDAMLAALRSLDAGQLEQLAVLAQRTPSQERDGLRDAFL VQAPATRSTWLKRQLAR >Mature_176_residues PMPLEEASAAPSASTPAAPVSSTTPSAAQQRARWEAMTPAQQAELRARYAAWKGLTATDRVVLRHARERLQALPEDQQRA LHTQFGAMDRLHRDGWRLGSQVGAFYAQLQPLIGYVPPAQRDAMLAALRSLDAGQLEQLAVLAQRTPSQERDGLRDAFLV QAPATRSTWLKRQLAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19531; Mature: 19400
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMPLEEASAAPSASTPAAPVSSTTPSAAQQRARWEAMTPAQQAELRARYAAWKGLTATD CCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHH RVVLRHARERLQALPEDQQRALHTQFGAMDRLHRDGWRLGSQVGAFYAQLQPLIGYVPPA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QRDAMLAALRSLDAGQLEQLAVLAQRTPSQERDGLRDAFLVQAPATRSTWLKRQLAR HHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHCCHHHHHCCCCCHHHHHHHHHHCC >Mature Secondary Structure PMPLEEASAAPSASTPAAPVSSTTPSAAQQRARWEAMTPAQQAELRARYAAWKGLTATD CCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHH RVVLRHARERLQALPEDQQRALHTQFGAMDRLHRDGWRLGSQVGAFYAQLQPLIGYVPPA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QRDAMLAALRSLDAGQLEQLAVLAQRTPSQERDGLRDAFLVQAPATRSTWLKRQLAR HHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHCCHHHHHCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA