Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
---|---|
Accession | NC_007705 |
Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84622176
Identifier: 84622176
GI number: 84622176
Start: 564451
End: 564816
Strand: Direct
Name: 84622176
Synonym: XOO_0519
Alternate gene names: NA
Gene position: 564451-564816 (Clockwise)
Preceding gene: 84622175
Following gene: 84622187
Centisome position: 11.43
GC content: 63.93
Gene sequence:
>366_bases ATGAATTACCGTCGGTTGGTGCATGGCGCCAAGTTCTGGTTATGGGTGGTGTTGTTCGTGGCGTATTCGGCGGCGGCAGT GAGCATCGTGATGATCGATACCGCCGATCACCGCTATCAGCCGCTGTCGGTGAAGTCCACCAGCGTCACCGCCGACGAAC AGCAGCGACGACATGGCGCAAGCCAGGTCGCTGCGGTGTATCGCGCCAGCAGTGCGATGCCGTTTTCCACCTTGCCTGCC GGCTCGACCTTCCAGGTGGTGTGGCCGAATGGTTCCACCGAAACCATGACCGTGGTCGACCCGTCGTCGGCCAACGGCAT CGTGCCGGTGCCGGGTAGGCAGCAGGCGCCTGCGCCGCGGCGGTGA
Upstream 100 bases:
>100_bases ATTTTGTGTCGTTCGTATTCGATGCCGCGGTGCCGCGGCAGGGAGCAGACAAGGTGGATGAGCTGGTCGATACATTGGTC TCCGATCCGGGAGCGCAGTC
Downstream 100 bases:
>100_bases GTAGTGCAGTAGGTCCTCCGCCGACATGACGGTCTGCGCGGTATTTGCTGCTGCTCGCCAGCCGAGCGTGGTGCCGCGAC ACAACGAAAAAGCCCGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MNYRRLVHGAKFWLWVVLFVAYSAAAVSIVMIDTADHRYQPLSVKSTSVTADEQQRRHGASQVAAVYRASSAMPFSTLPA GSTFQVVWPNGSTETMTVVDPSSANGIVPVPGRQQAPAPRR
Sequences:
>Translated_121_residues MNYRRLVHGAKFWLWVVLFVAYSAAAVSIVMIDTADHRYQPLSVKSTSVTADEQQRRHGASQVAAVYRASSAMPFSTLPA GSTFQVVWPNGSTETMTVVDPSSANGIVPVPGRQQAPAPRR >Mature_121_residues MNYRRLVHGAKFWLWVVLFVAYSAAAVSIVMIDTADHRYQPLSVKSTSVTADEQQRRHGASQVAAVYRASSAMPFSTLPA GSTFQVVWPNGSTETMTVVDPSSANGIVPVPGRQQAPAPRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13160; Mature: 13160
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYRRLVHGAKFWLWVVLFVAYSAAAVSIVMIDTADHRYQPLSVKSTSVTADEQQRRHGA CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCH SQVAAVYRASSAMPFSTLPAGSTFQVVWPNGSTETMTVVDPSSANGIVPVPGRQQAPAPR HHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCEEECCCCCCCCCCC R C >Mature Secondary Structure MNYRRLVHGAKFWLWVVLFVAYSAAAVSIVMIDTADHRYQPLSVKSTSVTADEQQRRHGA CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCH SQVAAVYRASSAMPFSTLPAGSTFQVVWPNGSTETMTVVDPSSANGIVPVPGRQQAPAPR HHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCEEECCCCCCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA