Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is ampG4 [H]
Identifier: 84622133
GI number: 84622133
Start: 514297
End: 515517
Strand: Direct
Name: ampG4 [H]
Synonym: XOO_0476
Alternate gene names: 84622133
Gene position: 514297-515517 (Clockwise)
Preceding gene: 84622132
Following gene: 84622134
Centisome position: 10.41
GC content: 63.23
Gene sequence:
>1221_bases ATGGCACTGCTGGGCTTCGGGAGCGGCTTGCCGTTCCTACTGATCGCCTCGCAGACCTTGTCCGTCCGATTGCGCGATGT AGGGCTGGACCTGCAGGACATCGGCTTCATCAGCCTGGCCAGCTTTTTCTATCTGCTCAAGTTTCTTTGGGCACCTCTGA TCGACCGCTATGCGTTTCCGCTCACCGCGTTTCTGGGGCGCCGTCGCTCCTGGTTGCTGGTGGCGCAGATCGGCGTCACC ATCGGCCTGTTGGCGCTGGCATTTTCGCGCCCGGATCTGAGCGTCATCGGCTTGGTCGGCTGGGTGCTCTTCGCTTCGTT CTGGGGTGCCACCCAGGATTCTGTCGTGGATGCTTACCGCATCGAAGTCGCTCCGGATTCCGCGCAGGCCGCGTTGGCGG CGACTTATACGCTGGGCTACCGCATCGGCCTGATCCTGGGCGGCGCTGGCGCGCTGTACATGGCCGAATACCTTGGTTGG ACGTGGGCGTATGTCGGCATGGCTGCACTGATGCTGGTGCCGATCGTCACTACCTTGCTGTGCCGCGAGCCCGACCGTGC CGAGGCGACCGTGGTGCGCCGAGTCGATGTCTCAGGTGCCTTTTGGCAACCGATTTCCAGTTTTTTCTCCAGCAATGGGC TGGCGCTGGGCATCGCGCTGCTGCTGTTCGTGGGCCTGTACAGGTTTCCCGACCAGGTGATCGGCGTCATGGCAGGCCCG TTCTATCTGGATTCGGGCTTCACCAAGGCCGATATCGCCACCGTCTCCAAGCTGTTCGGCGTCTGGATTGGGATTGTCGG CGCCTTCGCTGGCGGCGCGGCAATTGCCGCGTTCGGGTTCCGGCGCATGCTGCTGGTGGCCGCGTTGGGGGTGGCCCTGT CCAACCTGGCGTTCCTGCTGATGGCGCACAACCCCGGCAAGCTGTGGGCGTTCTATGCCGCGCTCAGTGCCGATAACCTG TTTCAGGGGTTCGCCGCCTCGGTGCTGGTGGCTTTCATGTCCTCGCTGACCGACCGCAACTTCACCGCAACCCAGTATGC GCTGCTGGCCTCGCTGGCCAACCTGCCGGGCAAGTTAGCCGGTGGTGTCTCAGGATCCGTGATTAATGCCACCTCCTACA GCACCTTCTTCATCCTCAGCGCCCTGACCGTCATTCCCACCCTGATGCTGCTGGCCTGGCTATGGCCGCGGCTGTTGGCG CACGACAGGCGGCCGGATTGA
Upstream 100 bases:
>100_bases GCGTTCGTTCTCGCCGGTGTGACGCATGACCACATCTGCACCTTCCTATAAAGGCTGGCGCGGTATCCAGCGCGCCTTCG CCACGCCATCGGCGGCGACC
Downstream 100 bases:
>100_bases AACATCCGCAAAGGTTGCCGATGATGTCCGCGGGGCAGCGCATTGCACGAGGCAGGGCATGACCGATTTGGTATTGCGTG ACATCGACCCGGTGCTGGTG
Product: signal transducer
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MALLGFGSGLPFLLIASQTLSVRLRDVGLDLQDIGFISLASFFYLLKFLWAPLIDRYAFPLTAFLGRRRSWLLVAQIGVT IGLLALAFSRPDLSVIGLVGWVLFASFWGATQDSVVDAYRIEVAPDSAQAALAATYTLGYRIGLILGGAGALYMAEYLGW TWAYVGMAALMLVPIVTTLLCREPDRAEATVVRRVDVSGAFWQPISSFFSSNGLALGIALLLFVGLYRFPDQVIGVMAGP FYLDSGFTKADIATVSKLFGVWIGIVGAFAGGAAIAAFGFRRMLLVAALGVALSNLAFLLMAHNPGKLWAFYAALSADNL FQGFAASVLVAFMSSLTDRNFTATQYALLASLANLPGKLAGGVSGSVINATSYSTFFILSALTVIPTLMLLAWLWPRLLA HDRRPD
Sequences:
>Translated_406_residues MALLGFGSGLPFLLIASQTLSVRLRDVGLDLQDIGFISLASFFYLLKFLWAPLIDRYAFPLTAFLGRRRSWLLVAQIGVT IGLLALAFSRPDLSVIGLVGWVLFASFWGATQDSVVDAYRIEVAPDSAQAALAATYTLGYRIGLILGGAGALYMAEYLGW TWAYVGMAALMLVPIVTTLLCREPDRAEATVVRRVDVSGAFWQPISSFFSSNGLALGIALLLFVGLYRFPDQVIGVMAGP FYLDSGFTKADIATVSKLFGVWIGIVGAFAGGAAIAAFGFRRMLLVAALGVALSNLAFLLMAHNPGKLWAFYAALSADNL FQGFAASVLVAFMSSLTDRNFTATQYALLASLANLPGKLAGGVSGSVINATSYSTFFILSALTVIPTLMLLAWLWPRLLA HDRRPD >Mature_405_residues ALLGFGSGLPFLLIASQTLSVRLRDVGLDLQDIGFISLASFFYLLKFLWAPLIDRYAFPLTAFLGRRRSWLLVAQIGVTI GLLALAFSRPDLSVIGLVGWVLFASFWGATQDSVVDAYRIEVAPDSAQAALAATYTLGYRIGLILGGAGALYMAEYLGWT WAYVGMAALMLVPIVTTLLCREPDRAEATVVRRVDVSGAFWQPISSFFSSNGLALGIALLLFVGLYRFPDQVIGVMAGPF YLDSGFTKADIATVSKLFGVWIGIVGAFAGGAAIAAFGFRRMLLVAALGVALSNLAFLLMAHNPGKLWAFYAALSADNLF QGFAASVLVAFMSSLTDRNFTATQYALLASLANLPGKLAGGVSGSVINATSYSTFFILSALTVIPTLMLLAWLWPRLLAH DRRPD
Specific function: Probably Acts As A Permease In The Beta-Lactamase Induction System And In Peptidoglycan Recycling. [C]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1786636, Length=391, Percent_Identity=35.0383631713555, Blast_Score=196, Evalue=2e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43548; Mature: 43416
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLGFGSGLPFLLIASQTLSVRLRDVGLDLQDIGFISLASFFYLLKFLWAPLIDRYAFP CEEEECCCCCCEEEEECHHHEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTAFLGRRRSWLLVAQIGVTIGLLALAFSRPDLSVIGLVGWVLFASFWGATQDSVVDAYR HHHHHCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHEEE IEVAPDSAQAALAATYTLGYRIGLILGGAGALYMAEYLGWTWAYVGMAALMLVPIVTTLL EEECCCCHHHHHHHHHHHHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CREPDRAEATVVRRVDVSGAFWQPISSFFSSNGLALGIALLLFVGLYRFPDQVIGVMAGP HCCCCCCHHHHEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCC FYLDSGFTKADIATVSKLFGVWIGIVGAFAGGAAIAAFGFRRMLLVAALGVALSNLAFLL EEECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEEE MAHNPGKLWAFYAALSADNLFQGFAASVLVAFMSSLTDRNFTATQYALLASLANLPGKLA EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHC GGVSGSVINATSYSTFFILSALTVIPTLMLLAWLWPRLLAHDRRPD CCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ALLGFGSGLPFLLIASQTLSVRLRDVGLDLQDIGFISLASFFYLLKFLWAPLIDRYAFP EEEECCCCCCEEEEECHHHEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTAFLGRRRSWLLVAQIGVTIGLLALAFSRPDLSVIGLVGWVLFASFWGATQDSVVDAYR HHHHHCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHEEE IEVAPDSAQAALAATYTLGYRIGLILGGAGALYMAEYLGWTWAYVGMAALMLVPIVTTLL EEECCCCHHHHHHHHHHHHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CREPDRAEATVVRRVDVSGAFWQPISSFFSSNGLALGIALLLFVGLYRFPDQVIGVMAGP HCCCCCCHHHHEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCC FYLDSGFTKADIATVSKLFGVWIGIVGAFAGGAAIAAFGFRRMLLVAALGVALSNLAFLL EEECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEEE MAHNPGKLWAFYAALSADNLFQGFAASVLVAFMSSLTDRNFTATQYALLASLANLPGKLA EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHC GGVSGSVINATSYSTFFILSALTVIPTLMLLAWLWPRLLAHDRRPD CCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]