Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is zwf [H]
Identifier: 84622089
GI number: 84622089
Start: 466584
End: 468380
Strand: Direct
Name: zwf [H]
Synonym: XOO_0432
Alternate gene names: 84622089
Gene position: 466584-468380 (Clockwise)
Preceding gene: 84622088
Following gene: 84622090
Centisome position: 9.44
GC content: 63.38
Gene sequence:
>1797_bases ATGAGTGAGCAAGCAACGACCCCGCCGTGCATCATTGTGGTGTTCGGCGCACGCGGCGATTTGACCAAGCGCCTGGTGAT GCCGGCGCTGTACAACCTGCGCCGCGCTGGCGCATTGGGCGAGCAATTCGCCATCGTCGGCATGGACCATGGCGACATCA GCGAGCGTGCGTGGCGCAGCAACATGGGGCAATCGATGACGCAGCTGCTCAGCAGCCGCGATGCCGAATTCCAGGCCGGC GAATTCGACACCGCCCCCTGGGACTGGCTGCGCGAGCGCATGCATTACCTGTGCGGCGACTTCACCGACCTGGGTGCGTA TCAGGCGCTGGGTGGCTTGCTGGACAAACTGCACAAGCGCTACGGCACCCAGGGCAATGTGCTGTTCTATCTGGCCACTG CTGCGCGTTTCTTCGAGCCGGTGCTGCTTAACCTGGGCGAAGCTGGCCTGGTCAAGCAACGCGAGAACGACGGCTGGCGG CGGGTGATCGTGGAAAAACCCTTCGGCCACGATCTGCCCAGCGCCAAGCACCTCAATGCCACTGTCGCCAAAGTGCTGCA CGAAGATCAGGTGTTCCGCATCGATCATTTCCTGGGCAAGGAAACCGTGCAGAACATTCTTGCGTTCCGCTTCGCCAACG GCTTGTTCGAGCCGGTGTGGAATCGCGACCGCATCGACCATGTGCAGATCACTGCGGCCGAAACCATCGGCGTGGAAGGG CGCGGGCGTTTCTACGACCCCACCGGCTGCCTGCGCGACATGGTGCCGAACCATCTGTTCCAGTTGCTGGCAATGATTGC GATGGAACCGCCGGCGGCATTTACGACGGAGGCAATGCATCGCCGTCGCGCCGAAGTCATCGAAGCGGTGCGCCCGATCA AACCCGAAGATGTGGTGCGCGGGCAATACGCCTCCGGTGCGGTCAGCCGTAGCGCGGTACCGGGCTATCGCGAAGAAGAC ACCGTGCCGGAGGATTCGGAAACCGAAACCTATGTGGCGATGAAGCTGCAGGTGGATACCTGGCGCTGGGCCGGCGTGCC GTTTTACTTGCGCACCGGCAAGCGCCTGCGCGAGCGCACCACCGAGATCGCGATCCGCTTCAAGCCGGCACCGCTGGCGC CATTCCGCAGCACCGAAGTGGGCGGCTATGGCCCTGACTGGCTGGTGCTGCATATCCAGCCGGATGAAGGCATCTCGCTG CAGTTCGATGTCAAACGCCCAGGCGCACAAGTGGCACTGGCGCCGGTGCGCATGGATTTTCGCTACCGCGACTGGTTTCC CAAGGAATACACCGTGGGCTACGAACGCCTGCTGCAGGACTGCATGAACGGCGAAGCCGGCCTGTTCCAGGATGCGGCCA TGGTGGAAGGCGCATGGCGCATCGTGCAACCGATCCTGGATGCGTGGAAACAACCGCCGAGCGATTTTCCCAATTACGCC GCCGGCAGCGCCGGCCCCTCGGCCGCCGACGCCTTGCTGGCAATGAATGGCGGACATGCCTGGCGCGCACTTACCCCAGG GCGCAAACCGCCACCGCGGCGCCCGCCGGAAACGCGTGCTGGTGCTGCAACGCCGGTGAAGAAAGCTGTCAAGAAAGCTG CGAATAAGCCAAGCAAGGTGCCCGCAAAGCGCACCACGTCTGCGGCTGCTGCGGCAAGCAACGTGGCGCAAACCGCACCC AAACGCGTAGCGAAGACGGGGGCAACGCCGGCGAAAGCTGTTGGCAAGCCCGCAGCTGGACGCAGCGGGGCGAAGAAGTC GGTCAGAAAATCCACGGCACCCAAATCGAGAAGTTGA
Upstream 100 bases:
>100_bases AACGCATGCTCGGCAACTTCCCGCAAGGGTATTCCCACGTGGCCCTGGTCAATGCGGCATTGCGCCTGCACGGACGCATG GGCGAAAAGGAAACGCATCC
Downstream 100 bases:
>100_bases GTGGCACGCGTCAGCCGCCGCTAGGCGGTTGACGCATTTATGTGCGCGGTGACAAAGCAGAGTGATCTAACATCGTACGA TCGCCATGGTTAGCAGCAGT
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 598; Mature: 597
Protein sequence:
>598_residues MSEQATTPPCIIVVFGARGDLTKRLVMPALYNLRRAGALGEQFAIVGMDHGDISERAWRSNMGQSMTQLLSSRDAEFQAG EFDTAPWDWLRERMHYLCGDFTDLGAYQALGGLLDKLHKRYGTQGNVLFYLATAARFFEPVLLNLGEAGLVKQRENDGWR RVIVEKPFGHDLPSAKHLNATVAKVLHEDQVFRIDHFLGKETVQNILAFRFANGLFEPVWNRDRIDHVQITAAETIGVEG RGRFYDPTGCLRDMVPNHLFQLLAMIAMEPPAAFTTEAMHRRRAEVIEAVRPIKPEDVVRGQYASGAVSRSAVPGYREED TVPEDSETETYVAMKLQVDTWRWAGVPFYLRTGKRLRERTTEIAIRFKPAPLAPFRSTEVGGYGPDWLVLHIQPDEGISL QFDVKRPGAQVALAPVRMDFRYRDWFPKEYTVGYERLLQDCMNGEAGLFQDAAMVEGAWRIVQPILDAWKQPPSDFPNYA AGSAGPSAADALLAMNGGHAWRALTPGRKPPPRRPPETRAGAATPVKKAVKKAANKPSKVPAKRTTSAAAAASNVAQTAP KRVAKTGATPAKAVGKPAAGRSGAKKSVRKSTAPKSRS
Sequences:
>Translated_598_residues MSEQATTPPCIIVVFGARGDLTKRLVMPALYNLRRAGALGEQFAIVGMDHGDISERAWRSNMGQSMTQLLSSRDAEFQAG EFDTAPWDWLRERMHYLCGDFTDLGAYQALGGLLDKLHKRYGTQGNVLFYLATAARFFEPVLLNLGEAGLVKQRENDGWR RVIVEKPFGHDLPSAKHLNATVAKVLHEDQVFRIDHFLGKETVQNILAFRFANGLFEPVWNRDRIDHVQITAAETIGVEG RGRFYDPTGCLRDMVPNHLFQLLAMIAMEPPAAFTTEAMHRRRAEVIEAVRPIKPEDVVRGQYASGAVSRSAVPGYREED TVPEDSETETYVAMKLQVDTWRWAGVPFYLRTGKRLRERTTEIAIRFKPAPLAPFRSTEVGGYGPDWLVLHIQPDEGISL QFDVKRPGAQVALAPVRMDFRYRDWFPKEYTVGYERLLQDCMNGEAGLFQDAAMVEGAWRIVQPILDAWKQPPSDFPNYA AGSAGPSAADALLAMNGGHAWRALTPGRKPPPRRPPETRAGAATPVKKAVKKAANKPSKVPAKRTTSAAAAASNVAQTAP KRVAKTGATPAKAVGKPAAGRSGAKKSVRKSTAPKSRS >Mature_597_residues SEQATTPPCIIVVFGARGDLTKRLVMPALYNLRRAGALGEQFAIVGMDHGDISERAWRSNMGQSMTQLLSSRDAEFQAGE FDTAPWDWLRERMHYLCGDFTDLGAYQALGGLLDKLHKRYGTQGNVLFYLATAARFFEPVLLNLGEAGLVKQRENDGWRR VIVEKPFGHDLPSAKHLNATVAKVLHEDQVFRIDHFLGKETVQNILAFRFANGLFEPVWNRDRIDHVQITAAETIGVEGR GRFYDPTGCLRDMVPNHLFQLLAMIAMEPPAAFTTEAMHRRRAEVIEAVRPIKPEDVVRGQYASGAVSRSAVPGYREEDT VPEDSETETYVAMKLQVDTWRWAGVPFYLRTGKRLRERTTEIAIRFKPAPLAPFRSTEVGGYGPDWLVLHIQPDEGISLQ FDVKRPGAQVALAPVRMDFRYRDWFPKEYTVGYERLLQDCMNGEAGLFQDAAMVEGAWRIVQPILDAWKQPPSDFPNYAA GSAGPSAADALLAMNGGHAWRALTPGRKPPPRRPPETRAGAATPVKKAVKKAANKPSKVPAKRTTSAAAAASNVAQTAPK RVAKTGATPAKAVGKPAAGRSGAKKSVRKSTAPKSRS
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI109389365, Length=490, Percent_Identity=34.6938775510204, Blast_Score=287, Evalue=2e-77, Organism=Homo sapiens, GI108773793, Length=490, Percent_Identity=34.6938775510204, Blast_Score=286, Evalue=3e-77, Organism=Homo sapiens, GI52145310, Length=368, Percent_Identity=31.25, Blast_Score=159, Evalue=9e-39, Organism=Escherichia coli, GI1788158, Length=505, Percent_Identity=37.6237623762376, Blast_Score=335, Evalue=4e-93, Organism=Caenorhabditis elegans, GI17538218, Length=505, Percent_Identity=33.8613861386139, Blast_Score=294, Evalue=7e-80, Organism=Saccharomyces cerevisiae, GI6324088, Length=525, Percent_Identity=33.1428571428571, Blast_Score=273, Evalue=7e-74, Organism=Drosophila melanogaster, GI24643350, Length=504, Percent_Identity=31.9444444444444, Blast_Score=258, Evalue=6e-69, Organism=Drosophila melanogaster, GI24643352, Length=504, Percent_Identity=31.9444444444444, Blast_Score=258, Evalue=9e-69, Organism=Drosophila melanogaster, GI221513548, Length=484, Percent_Identity=30.3719008264463, Blast_Score=206, Evalue=4e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 66053; Mature: 65922
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQATTPPCIIVVFGARGDLTKRLVMPALYNLRRAGALGEQFAIVGMDHGDISERAWRS CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHH NMGQSMTQLLSSRDAEFQAGEFDTAPWDWLRERMHYLCGDFTDLGAYQALGGLLDKLHKR HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH YGTQGNVLFYLATAARFFEPVLLNLGEAGLVKQRENDGWRRVIVEKPFGHDLPSAKHLNA HCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHH TVAKVLHEDQVFRIDHFLGKETVQNILAFRFANGLFEPVWNRDRIDHVQITAAETIGVEG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCCCCC RGRFYDPTGCLRDMVPNHLFQLLAMIAMEPPAAFTTEAMHRRRAEVIEAVRPIKPEDVVR CCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHC GQYASGAVSRSAVPGYREEDTVPEDSETETYVAMKLQVDTWRWAGVPFYLRTGKRLRERT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEECCCCCEECCCHHHHHHH TEIAIRFKPAPLAPFRSTEVGGYGPDWLVLHIQPDEGISLQFDVKRPGAQVALAPVRMDF HEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCEEEEEEEECC RYRDWFPKEYTVGYERLLQDCMNGEAGLFQDAAMVEGAWRIVQPILDAWKQPPSDFPNYA CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AGSAGPSAADALLAMNGGHAWRALTPGRKPPPRRPPETRAGAATPVKKAVKKAANKPSKV CCCCCCHHHHHHEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC PAKRTTSAAAAASNVAQTAPKRVAKTGATPAKAVGKPAAGRSGAKKSVRKSTAPKSRS CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure SEQATTPPCIIVVFGARGDLTKRLVMPALYNLRRAGALGEQFAIVGMDHGDISERAWRS CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHH NMGQSMTQLLSSRDAEFQAGEFDTAPWDWLRERMHYLCGDFTDLGAYQALGGLLDKLHKR HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH YGTQGNVLFYLATAARFFEPVLLNLGEAGLVKQRENDGWRRVIVEKPFGHDLPSAKHLNA HCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHH TVAKVLHEDQVFRIDHFLGKETVQNILAFRFANGLFEPVWNRDRIDHVQITAAETIGVEG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCCCCC RGRFYDPTGCLRDMVPNHLFQLLAMIAMEPPAAFTTEAMHRRRAEVIEAVRPIKPEDVVR CCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHC GQYASGAVSRSAVPGYREEDTVPEDSETETYVAMKLQVDTWRWAGVPFYLRTGKRLRERT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEECCCCCEECCCHHHHHHH TEIAIRFKPAPLAPFRSTEVGGYGPDWLVLHIQPDEGISLQFDVKRPGAQVALAPVRMDF HEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCEEEEEEEECC RYRDWFPKEYTVGYERLLQDCMNGEAGLFQDAAMVEGAWRIVQPILDAWKQPPSDFPNYA CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AGSAGPSAADALLAMNGGHAWRALTPGRKPPPRRPPETRAGAATPVKKAVKKAANKPSKV CCCCCCHHHHHHEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC PAKRTTSAAAAASNVAQTAPKRVAKTGATPAKAVGKPAAGRSGAKKSVRKSTAPKSRS CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]