Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is 84622087

Identifier: 84622087

GI number: 84622087

Start: 464788

End: 466125

Strand: Direct

Name: 84622087

Synonym: XOO_0430

Alternate gene names: NA

Gene position: 464788-466125 (Clockwise)

Preceding gene: 84622086

Following gene: 84622088

Centisome position: 9.41

GC content: 63.23

Gene sequence:

>1338_bases
ATGAGCGTGCGTATCGAGGACCATGCCATGCTGGGCAACTGCCACAGCGCGGCCCTGGTCGATCACCGCGGCACCATCGA
TTGGCTGTGTCTGCCACGCTTCGATTCCGACGCCGTCTTCGCCTCGTTGTTGGGCGCTGACCAACATGGGCAATGGGCAT
TGTCGCCGGCTGCCGACTTCCGCACCGAGCGCGCCTACGAAGACGACAGTCTGGTGCTGTGCACGCGCATGATCACCGAC
AGCGGCACGGTGGAACTGGTCGACTTCATGGTGGCCAGCGAAAACACCGAAGTCCACCAGCACCTGGTGCGTCTCGTGCG
CTGCGTACAGGGCAGCGTGCCGATGCACATGCGCCTCACCTTCCGCTTCAACTACGGCCGCACGGTGCCATGGGTCACAC
GTATCGTCGATGGCATCCGCGCCATCGCCGGCCCCGATCAACTGGCACTGCGTTCGCCGCAAACGCTGCGCGGCCAAGAC
ATGGGCACCGAAGCCGACTTCACCCTGCGCGAAGGCGGAAGCACCTGGTTTCTGCTCAGCCACGGCGCCTCGCATCTGGA
GACGCCGCCCCTGATCGATGCCGAACAGGCATTGCAACGCACCACCGCGTTCTGGCATGGCTGGGCGCGCCGCTGCACCG
ATGTCGGGCCGTGGACCGAGCAGGTACGCCGCTCTTTGGTCGTTTTGAAGGGACTGAGTTATCTGCCCACCGGCGGCATT
GTCGCCGCGCCCACTGCCGCGTTGCCGGAGCATCTGGGCGGCACGCGTAATTGGGATTACCGCTACTGCTGGCTGCGCGA
TTCGGTGTTCACCCTGATTGCGTTGCTGCAGGCCGGGTATCGCGATGAAGCCGCTGCGTTTCGCGATTGGGTCCACCGCA
CCATTGCCGGTTCGCCGGATCAATTGCAGGCGTTGTACGGCATCGCCGGCGAACGCCGCTTGCAGGAATGGGAAGCGTCC
TGGTTGCCCGGTTATGAAGATTCCGGCCCGGTACGCATCGGTAATGGCGCGGTGGATCAGTTTCAGCTCGATGTCTATGG
GGAGTTGATCGGCGCCTTTCATTACGCAAGCGAAAAAGGCGTCGGCCCGCCGTCGGACGACGATGGTTCGTCCGCATCGC
TGCTGGAAAACATCCTCGATACACTGGAAACGCTGTGGCGCGAACCCGATGAAGGCATCTGGGAAATCCGCGACGAGCGC
CGCCACTTCGTCCATTCCAAGGTGATGGCCTGGCTGGCGTTCGACTGCGGCGCGCGTGACGGCATCACCAATGCAGACGC
TGAAAAACGCGCGCACTGGGGCCGCATTGCCGACCAAATTCGAGCCGAAGTCCTGTAA

Upstream 100 bases:

>100_bases
GGTGCCACCGCTGCTTGGTTTGCCGGCGCAGTCGTGACCTGATCCCGACACGGTGCATGCAAAACTGCGCGTTCTTTCGC
CGGAAGGAAGCGCCCAACCC

Downstream 100 bases:

>100_bases
AAAGGCGTACATCCGGACGGCCATTTCGTGCAGAGCTATGGCTCGGATCGGCTGGATGCCTCGCTGCTGCTGATCCCCAT
CGTGGGTTTTCTGCCGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Glucoamylase; Glycoside Hydrolase Family Protein; Trehalose-Phosphatase; Glucoamylase-Like Glycosyl Hydrolase; Trehalose Phosphatase; Glycosyl Hydrolase Glucoamylase; Trehalose-Phosphatase/ Glycoside Hydrolase; Glucoamylase Or Related Glycosyl Hydrolase Protein; Glucoamylase Or Related Glycosyl Hydrolase; Six-Hairpin Glycosidase-Like Protein; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Glycosyl Hydrolase Protein

Number of amino acids: Translated: 445; Mature: 444

Protein sequence:

>445_residues
MSVRIEDHAMLGNCHSAALVDHRGTIDWLCLPRFDSDAVFASLLGADQHGQWALSPAADFRTERAYEDDSLVLCTRMITD
SGTVELVDFMVASENTEVHQHLVRLVRCVQGSVPMHMRLTFRFNYGRTVPWVTRIVDGIRAIAGPDQLALRSPQTLRGQD
MGTEADFTLREGGSTWFLLSHGASHLETPPLIDAEQALQRTTAFWHGWARRCTDVGPWTEQVRRSLVVLKGLSYLPTGGI
VAAPTAALPEHLGGTRNWDYRYCWLRDSVFTLIALLQAGYRDEAAAFRDWVHRTIAGSPDQLQALYGIAGERRLQEWEAS
WLPGYEDSGPVRIGNGAVDQFQLDVYGELIGAFHYASEKGVGPPSDDDGSSASLLENILDTLETLWREPDEGIWEIRDER
RHFVHSKVMAWLAFDCGARDGITNADAEKRAHWGRIADQIRAEVL

Sequences:

>Translated_445_residues
MSVRIEDHAMLGNCHSAALVDHRGTIDWLCLPRFDSDAVFASLLGADQHGQWALSPAADFRTERAYEDDSLVLCTRMITD
SGTVELVDFMVASENTEVHQHLVRLVRCVQGSVPMHMRLTFRFNYGRTVPWVTRIVDGIRAIAGPDQLALRSPQTLRGQD
MGTEADFTLREGGSTWFLLSHGASHLETPPLIDAEQALQRTTAFWHGWARRCTDVGPWTEQVRRSLVVLKGLSYLPTGGI
VAAPTAALPEHLGGTRNWDYRYCWLRDSVFTLIALLQAGYRDEAAAFRDWVHRTIAGSPDQLQALYGIAGERRLQEWEAS
WLPGYEDSGPVRIGNGAVDQFQLDVYGELIGAFHYASEKGVGPPSDDDGSSASLLENILDTLETLWREPDEGIWEIRDER
RHFVHSKVMAWLAFDCGARDGITNADAEKRAHWGRIADQIRAEVL
>Mature_444_residues
SVRIEDHAMLGNCHSAALVDHRGTIDWLCLPRFDSDAVFASLLGADQHGQWALSPAADFRTERAYEDDSLVLCTRMITDS
GTVELVDFMVASENTEVHQHLVRLVRCVQGSVPMHMRLTFRFNYGRTVPWVTRIVDGIRAIAGPDQLALRSPQTLRGQDM
GTEADFTLREGGSTWFLLSHGASHLETPPLIDAEQALQRTTAFWHGWARRCTDVGPWTEQVRRSLVVLKGLSYLPTGGIV
AAPTAALPEHLGGTRNWDYRYCWLRDSVFTLIALLQAGYRDEAAAFRDWVHRTIAGSPDQLQALYGIAGERRLQEWEASW
LPGYEDSGPVRIGNGAVDQFQLDVYGELIGAFHYASEKGVGPPSDDDGSSASLLENILDTLETLWREPDEGIWEIRDERR
HFVHSKVMAWLAFDCGARDGITNADAEKRAHWGRIADQIRAEVL

Specific function: Unknown

COG id: COG3387

COG function: function code G; Glucoamylase and related glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49779; Mature: 49648

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRIEDHAMLGNCHSAALVDHRGTIDWLCLPRFDSDAVFASLLGADQHGQWALSPAADF
CCEEECCCHHHCCCCHHHEECCCCCEEEEEECCCCCHHHHHHHHCCCCCCCEEECCHHHH
RTERAYEDDSLVLCTRMITDSGTVELVDFMVASENTEVHQHLVRLVRCVQGSVPMHMRLT
HHHHCCCCCCEEEEEEHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEE
FRFNYGRTVPWVTRIVDGIRAIAGPDQLALRSPQTLRGQDMGTEADFTLREGGSTWFLLS
EEECCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEEE
HGASHLETPPLIDAEQALQRTTAFWHGWARRCTDVGPWTEQVRRSLVVLKGLSYLPTGGI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCE
VAAPTAALPEHLGGTRNWDYRYCWLRDSVFTLIALLQAGYRDEAAAFRDWVHRTIAGSPD
EECCCHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHH
QLQALYGIAGERRLQEWEASWLPGYEDSGPVRIGNGAVDQFQLDVYGELIGAFHYASEKG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCC
VGPPSDDDGSSASLLENILDTLETLWREPDEGIWEIRDERRHFVHSKVMAWLAFDCGARD
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GITNADAEKRAHWGRIADQIRAEVL
CCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVRIEDHAMLGNCHSAALVDHRGTIDWLCLPRFDSDAVFASLLGADQHGQWALSPAADF
CEEECCCHHHCCCCHHHEECCCCCEEEEEECCCCCHHHHHHHHCCCCCCCEEECCHHHH
RTERAYEDDSLVLCTRMITDSGTVELVDFMVASENTEVHQHLVRLVRCVQGSVPMHMRLT
HHHHCCCCCCEEEEEEHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEE
FRFNYGRTVPWVTRIVDGIRAIAGPDQLALRSPQTLRGQDMGTEADFTLREGGSTWFLLS
EEECCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEEE
HGASHLETPPLIDAEQALQRTTAFWHGWARRCTDVGPWTEQVRRSLVVLKGLSYLPTGGI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCE
VAAPTAALPEHLGGTRNWDYRYCWLRDSVFTLIALLQAGYRDEAAAFRDWVHRTIAGSPD
EECCCHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHH
QLQALYGIAGERRLQEWEASWLPGYEDSGPVRIGNGAVDQFQLDVYGELIGAFHYASEKG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCC
VGPPSDDDGSSASLLENILDTLETLWREPDEGIWEIRDERRHFVHSKVMAWLAFDCGARD
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GITNADAEKRAHWGRIADQIRAEVL
CCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA