| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is fabG [H]
Identifier: 84622079
GI number: 84622079
Start: 454877
End: 455638
Strand: Direct
Name: fabG [H]
Synonym: XOO_0422
Alternate gene names: 84622079
Gene position: 454877-455638 (Clockwise)
Preceding gene: 84622078
Following gene: 84622085
Centisome position: 9.21
GC content: 63.91
Gene sequence:
>762_bases ATGCGCGGCTCCATCGAGATTTCCATGAGCACATCCATTCCACAACGTCGTGCACTCGTCACCGGCGGTAGCGGCGATCT TGGCGGTGCGATCTGCGGTCACCTGGCAGCCCAGGGCCGGCATGTGATCGTGCATGCCAATCGCAATCTGGTGCGTGCGC GAGAGGTGGTTGCTGCGATCGTGGCCAATGGCGGCAGCGCACAGGCGGTGGCCTTCGATGTGGCCGATGCGCAGGCCAGT TTGGCGGCTGTGGAGGCGTTGCTTGAAGTTGGCCCGATCCAGATCGTGGTCAACAACGCGGGCATCCACGACGACGCGCC AATGGCCGGCATGAATGTGGAGCAGTGGCACCGCGTCATCGATGTGTCGCTGCACGGTTTCTTCCACGTCACCCAGCCGT TGCTGCTGCCGATGGCGCGCACGCGTTGGGGCCGCATCGTCAGCGTTTCGTCTGTGGCGGCCGTGTTGGGCAATCGCGGC CAGACCAACTACGCCGCCGCCAAGGCGGCGTTGCACGGTGCCAGCAAGTCGCTGTCGCGCGAAATGGCCAGCCGCGGTAT CGCAGTGAATGTCGTTGCACCGGGCGTGATCGCAAGCGACATGGTTGGCGATAGTTTTGCGCCGGAGGTGATCAAGCAAT TGGTGCCGGCCGGCCGCGTCGGCAAGCCCGATGAAGTGGCTGCGCTGGTCGCCTTTCTGTGCTCGGAAGCGGCTGGCTAC ATCAATGGCCAGGTGATTGGCGTCAATGGTGGGATGGGCTGA
Upstream 100 bases:
>100_bases TCGCTGTCGCAGGAGGTCAGCGGTATCAGCCTTGAGCAGATCGCTGGCACCTGGCCGGCGTGACTGATTAGTATGGTCTT CTTTTTGTTTCCGCTGCCGC
Downstream 100 bases:
>100_bases GGGCCGCAGCCGAATCGTGTGGCGTGTTCGCTGAAAAGGTGGCGAGCCAATGACCTGCGACAGACCAGAACGCGCTGCAG CCTTGGACTGCAGCGCTAGG
Product: 3-ketoacyl-(acyl-carrier-protein) reductase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase 1 [H]
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MRGSIEISMSTSIPQRRALVTGGSGDLGGAICGHLAAQGRHVIVHANRNLVRAREVVAAIVANGGSAQAVAFDVADAQAS LAAVEALLEVGPIQIVVNNAGIHDDAPMAGMNVEQWHRVIDVSLHGFFHVTQPLLLPMARTRWGRIVSVSSVAAVLGNRG QTNYAAAKAALHGASKSLSREMASRGIAVNVVAPGVIASDMVGDSFAPEVIKQLVPAGRVGKPDEVAALVAFLCSEAAGY INGQVIGVNGGMG
Sequences:
>Translated_253_residues MRGSIEISMSTSIPQRRALVTGGSGDLGGAICGHLAAQGRHVIVHANRNLVRAREVVAAIVANGGSAQAVAFDVADAQAS LAAVEALLEVGPIQIVVNNAGIHDDAPMAGMNVEQWHRVIDVSLHGFFHVTQPLLLPMARTRWGRIVSVSSVAAVLGNRG QTNYAAAKAALHGASKSLSREMASRGIAVNVVAPGVIASDMVGDSFAPEVIKQLVPAGRVGKPDEVAALVAFLCSEAAGY INGQVIGVNGGMG >Mature_253_residues MRGSIEISMSTSIPQRRALVTGGSGDLGGAICGHLAAQGRHVIVHANRNLVRAREVVAAIVANGGSAQAVAFDVADAQAS LAAVEALLEVGPIQIVVNNAGIHDDAPMAGMNVEQWHRVIDVSLHGFFHVTQPLLLPMARTRWGRIVSVSSVAAVLGNRG QTNYAAAKAALHGASKSLSREMASRGIAVNVVAPGVIASDMVGDSFAPEVIKQLVPAGRVGKPDEVAALVAFLCSEAAGY INGQVIGVNGGMG
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=248, Percent_Identity=35.4838709677419, Blast_Score=121, Evalue=6e-28, Organism=Homo sapiens, GI32483357, Length=243, Percent_Identity=33.3333333333333, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI40254992, Length=236, Percent_Identity=35.1694915254237, Blast_Score=108, Evalue=3e-24, Organism=Homo sapiens, GI19923817, Length=247, Percent_Identity=32.7935222672065, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI4504505, Length=231, Percent_Identity=33.7662337662338, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI5031737, Length=250, Percent_Identity=31.2, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI4503301, Length=198, Percent_Identity=32.8282828282828, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI126723750, Length=244, Percent_Identity=27.4590163934426, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI10190704, Length=244, Percent_Identity=30.327868852459, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI7705925, Length=249, Percent_Identity=26.9076305220884, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI7706318, Length=201, Percent_Identity=28.3582089552239, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI4758504, Length=264, Percent_Identity=28.4090909090909, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI59889578, Length=176, Percent_Identity=29.5454545454545, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI20149619, Length=190, Percent_Identity=28.9473684210526, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI7657478, Length=195, Percent_Identity=29.2307692307692, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI4503817, Length=225, Percent_Identity=24.8888888888889, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI33667109, Length=197, Percent_Identity=30.9644670050761, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1787335, Length=238, Percent_Identity=44.1176470588235, Blast_Score=167, Evalue=7e-43, Organism=Escherichia coli, GI2367175, Length=243, Percent_Identity=35.3909465020576, Blast_Score=114, Evalue=4e-27, Organism=Escherichia coli, GI1790717, Length=247, Percent_Identity=30.3643724696356, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1788459, Length=239, Percent_Identity=32.2175732217573, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1787905, Length=240, Percent_Identity=31.6666666666667, Blast_Score=100, Evalue=9e-23, Organism=Escherichia coli, GI87082100, Length=249, Percent_Identity=32.1285140562249, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI87082160, Length=246, Percent_Identity=28.8617886178862, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1789208, Length=246, Percent_Identity=27.6422764227642, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1786812, Length=192, Percent_Identity=33.3333333333333, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI1789378, Length=246, Percent_Identity=30.8943089430894, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI2367365, Length=244, Percent_Identity=29.9180327868852, Blast_Score=84, Evalue=6e-18, Organism=Escherichia coli, GI1789057, Length=252, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17555706, Length=253, Percent_Identity=35.9683794466403, Blast_Score=131, Evalue=4e-31, Organism=Caenorhabditis elegans, GI25147288, Length=250, Percent_Identity=35.2, Blast_Score=129, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17560676, Length=249, Percent_Identity=33.7349397590361, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17568967, Length=238, Percent_Identity=34.8739495798319, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17560150, Length=255, Percent_Identity=30.1960784313725, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71994600, Length=249, Percent_Identity=30.1204819277108, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17562990, Length=257, Percent_Identity=30.3501945525292, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17562910, Length=260, Percent_Identity=30.3846153846154, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI115534694, Length=244, Percent_Identity=31.1475409836066, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71994604, Length=248, Percent_Identity=29.4354838709677, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17536651, Length=246, Percent_Identity=30.8943089430894, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17538486, Length=256, Percent_Identity=31.25, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17538480, Length=256, Percent_Identity=32.421875, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17559104, Length=262, Percent_Identity=29.0076335877863, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17565030, Length=266, Percent_Identity=30.8270676691729, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17561402, Length=251, Percent_Identity=29.8804780876494, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17563726, Length=257, Percent_Identity=28.0155642023346, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17562906, Length=264, Percent_Identity=29.5454545454545, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17560332, Length=258, Percent_Identity=29.4573643410853, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17561272, Length=233, Percent_Identity=30.0429184549356, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI193204405, Length=258, Percent_Identity=30.2325581395349, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17538182, Length=252, Percent_Identity=30.5555555555556, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17536025, Length=249, Percent_Identity=29.718875502008, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI72000259, Length=256, Percent_Identity=27.734375, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17562904, Length=259, Percent_Identity=28.957528957529, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17551412, Length=272, Percent_Identity=28.6764705882353, Blast_Score=77, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17562908, Length=255, Percent_Identity=29.4117647058824, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17531453, Length=257, Percent_Identity=29.9610894941634, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17508895, Length=196, Percent_Identity=26.530612244898, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17560220, Length=258, Percent_Identity=27.1317829457364, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17508651, Length=256, Percent_Identity=27.34375, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17544670, Length=266, Percent_Identity=24.812030075188, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=239, Percent_Identity=30.9623430962343, Blast_Score=104, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6324126, Length=186, Percent_Identity=27.4193548387097, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI24639444, Length=248, Percent_Identity=39.1129032258064, Blast_Score=134, Evalue=6e-32, Organism=Drosophila melanogaster, GI28571526, Length=253, Percent_Identity=32.0158102766798, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI23397609, Length=249, Percent_Identity=30.9236947791165, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI21357041, Length=252, Percent_Identity=32.5396825396825, Blast_Score=94, Evalue=7e-20, Organism=Drosophila melanogaster, GI18859837, Length=232, Percent_Identity=32.3275862068966, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI24644339, Length=243, Percent_Identity=29.6296296296296, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI24643142, Length=249, Percent_Identity=32.5301204819277, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI21355319, Length=244, Percent_Identity=28.2786885245902, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI17737361, Length=253, Percent_Identity=30.0395256916996, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24644337, Length=169, Percent_Identity=31.9526627218935, Blast_Score=72, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 25917; Mature: 25917
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGSIEISMSTSIPQRRALVTGGSGDLGGAICGHLAAQGRHVIVHANRNLVRAREVVAAI CCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH VANGGSAQAVAFDVADAQASLAAVEALLEVGPIQIVVNNAGIHDDAPMAGMNVEQWHRVI HCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHH DVSLHGFFHVTQPLLLPMARTRWGRIVSVSSVAAVLGNRGQTNYAAAKAALHGASKSLSR HHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH EMASRGIAVNVVAPGVIASDMVGDSFAPEVIKQLVPAGRVGKPDEVAALVAFLCSEAAGY HHHHCCEEEEEECCCHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC INGQVIGVNGGMG CCCEEEEECCCCC >Mature Secondary Structure MRGSIEISMSTSIPQRRALVTGGSGDLGGAICGHLAAQGRHVIVHANRNLVRAREVVAAI CCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH VANGGSAQAVAFDVADAQASLAAVEALLEVGPIQIVVNNAGIHDDAPMAGMNVEQWHRVI HCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHH DVSLHGFFHVTQPLLLPMARTRWGRIVSVSSVAAVLGNRGQTNYAAAKAALHGASKSLSR HHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH EMASRGIAVNVVAPGVIASDMVGDSFAPEVIKQLVPAGRVGKPDEVAALVAFLCSEAAGY HHHHCCEEEEEECCCHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC INGQVIGVNGGMG CCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]