Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is arcB [H]
Identifier: 84622054
GI number: 84622054
Start: 430148
End: 431071
Strand: Direct
Name: arcB [H]
Synonym: XOO_0397
Alternate gene names: 84622054
Gene position: 430148-431071 (Clockwise)
Preceding gene: 84622049
Following gene: 84622055
Centisome position: 8.71
GC content: 67.64
Gene sequence:
>924_bases ATGGCAACGCAGTACGTGCCGGTTTCCCTGATTGGCGTTCCCACCGACATCGGCGCCGGCCACCGCGGCGCGCGCATGGG ACCGGAGGCGCTACGCATCGCCGGACTGCACGAGGCCCTGGTCGGCCGCGGTGTGGAGGTGCGCGACCTGGGCAACCTGG ATGGCCCGCGCAATCCCTGGCAGGCACCGCAAGCCGGCTACCGGCATCTGGACGAAGTGGTGGCCTGGAACCAGGCGCTG ATGGGCGCCAGCTACGCCGAACTGCGTGCCGGACGCATGCCGATCATGCTCGGTGGCGACCATTGCCTGGGCATCGGCTC CATCACCGCGGTGGCCAAGTACTGCCGCGAGCAGGGCCGGCCGTTGCGGGTGCTGTGGCTGGATGCGCACTCGGACTTCA ACACCAGCGAGGTGACGCCCTCGGGCAATGTGCACGGCATGCCGGTGGCCTGTCTGTGCGGGCTGGGCCCGGAGACGCTG ACCCATCTGGGCGGCAGTGCGCCGGCGCTGTTGCCCGAGCAGGTACGGCAGATCGGCATCCGCTCGGTGGACCCGGAGGA GAAGCGGCTGATCAAGCAGCACCGCATCGATGTCTACGACATGCGCTACATCGACGAAGCCGGCATGAAGCGCACCATGG AGGCCGCGTTGCAGGACATGAGTGCCGACACGCACCTGCATGTGAGCTTCGATGTGGACTTCCTCGACCCCAGCATCGCG CCGGGCGTGGGCACCACCGTGCCCGGTGGCCCCAACTACCGCGAGGCGCAGCTGGTGATGGAGATGATCGCCGACACCGG GCGCATGGGGTCGTTGGACATCGTCGAGCTCAACCCGGTGCTGGACAACCGCAACGCGACCGCCGAACTGGCGGTGGATC TGGTCGAAAGCCTGTTCGGCAAATCGACGCTGATGCGGGATTGA
Upstream 100 bases:
>100_bases CGCACCGTTCATGGCACGGCCCATGCCGTGTTGCGCTGCTGCGCGTCACGGTGCGGGCGTACCACTAGAATGCTCGGTTT TATCGATACTGGAGCAATGC
Downstream 100 bases:
>100_bases TCCAGCGCTGAACGCGGCGCGCCACGTTCACATCAAATCCACGGCCGCGCAGTCAGATTTGGCGCCAAGCTAGGTGCGCT GGCACCGTTACACAACGAGG
Product: arginase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MATQYVPVSLIGVPTDIGAGHRGARMGPEALRIAGLHEALVGRGVEVRDLGNLDGPRNPWQAPQAGYRHLDEVVAWNQAL MGASYAELRAGRMPIMLGGDHCLGIGSITAVAKYCREQGRPLRVLWLDAHSDFNTSEVTPSGNVHGMPVACLCGLGPETL THLGGSAPALLPEQVRQIGIRSVDPEEKRLIKQHRIDVYDMRYIDEAGMKRTMEAALQDMSADTHLHVSFDVDFLDPSIA PGVGTTVPGGPNYREAQLVMEMIADTGRMGSLDIVELNPVLDNRNATAELAVDLVESLFGKSTLMRD
Sequences:
>Translated_307_residues MATQYVPVSLIGVPTDIGAGHRGARMGPEALRIAGLHEALVGRGVEVRDLGNLDGPRNPWQAPQAGYRHLDEVVAWNQAL MGASYAELRAGRMPIMLGGDHCLGIGSITAVAKYCREQGRPLRVLWLDAHSDFNTSEVTPSGNVHGMPVACLCGLGPETL THLGGSAPALLPEQVRQIGIRSVDPEEKRLIKQHRIDVYDMRYIDEAGMKRTMEAALQDMSADTHLHVSFDVDFLDPSIA PGVGTTVPGGPNYREAQLVMEMIADTGRMGSLDIVELNPVLDNRNATAELAVDLVESLFGKSTLMRD >Mature_306_residues ATQYVPVSLIGVPTDIGAGHRGARMGPEALRIAGLHEALVGRGVEVRDLGNLDGPRNPWQAPQAGYRHLDEVVAWNQALM GASYAELRAGRMPIMLGGDHCLGIGSITAVAKYCREQGRPLRVLWLDAHSDFNTSEVTPSGNVHGMPVACLCGLGPETLT HLGGSAPALLPEQVRQIGIRSVDPEEKRLIKQHRIDVYDMRYIDEAGMKRTMEAALQDMSADTHLHVSFDVDFLDPSIAP GVGTTVPGGPNYREAQLVMEMIADTGRMGSLDIVELNPVLDNRNATAELAVDLVESLFGKSTLMRD
Specific function: Catalyzes The Formation Of Putrescine From Agmatine. [C]
COG id: COG0010
COG function: function code E; Arginase/agmatinase/formimionoglutamate hydrolase, arginase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arginase family [H]
Homologues:
Organism=Homo sapiens, GI4502215, Length=308, Percent_Identity=36.038961038961, Blast_Score=176, Evalue=2e-44, Organism=Homo sapiens, GI10947139, Length=309, Percent_Identity=34.6278317152104, Blast_Score=162, Evalue=4e-40, Organism=Escherichia coli, GI1789306, Length=284, Percent_Identity=24.6478873239437, Blast_Score=62, Evalue=6e-11, Organism=Caenorhabditis elegans, GI71996843, Length=207, Percent_Identity=33.3333333333333, Blast_Score=112, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6325146, Length=204, Percent_Identity=38.7254901960784, Blast_Score=142, Evalue=4e-35, Organism=Drosophila melanogaster, GI24638886, Length=304, Percent_Identity=33.5526315789474, Blast_Score=163, Evalue=1e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014033 - InterPro: IPR006035 - InterPro: IPR020855 [H]
Pfam domain/function: PF00491 Arginase [H]
EC number: =3.5.3.1 [H]
Molecular weight: Translated: 33162; Mature: 33031
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS00148 ARGINASE_2 ; PS01053 ARGINASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATQYVPVSLIGVPTDIGAGHRGARMGPEALRIAGLHEALVGRGVEVRDLGNLDGPRNPW CCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC QAPQAGYRHLDEVVAWNQALMGASYAELRAGRMPIMLGGDHCLGIGSITAVAKYCREQGR CCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEECCCCEECHHHHHHHHHHHHHCCC PLRVLWLDAHSDFNTSEVTPSGNVHGMPVACLCGLGPETLTHLGGSAPALLPEQVRQIGI CEEEEEEECCCCCCCCCCCCCCCCCCCCHHHEECCCHHHHHHCCCCCCCCCHHHHHHCCC RSVDPEEKRLIKQHRIDVYDMRYIDEAGMKRTMEAALQDMSADTHLHVSFDVDFLDPSIA CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCC PGVGTTVPGGPNYREAQLVMEMIADTGRMGSLDIVELNPVLDNRNATAELAVDLVESLFG CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHC KSTLMRD CHHHCCC >Mature Secondary Structure ATQYVPVSLIGVPTDIGAGHRGARMGPEALRIAGLHEALVGRGVEVRDLGNLDGPRNPW CCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC QAPQAGYRHLDEVVAWNQALMGASYAELRAGRMPIMLGGDHCLGIGSITAVAKYCREQGR CCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEECCCCEECHHHHHHHHHHHHHCCC PLRVLWLDAHSDFNTSEVTPSGNVHGMPVACLCGLGPETLTHLGGSAPALLPEQVRQIGI CEEEEEEECCCCCCCCCCCCCCCCCCCCHHHEECCCHHHHHHCCCCCCCCCHHHHHHCCC RSVDPEEKRLIKQHRIDVYDMRYIDEAGMKRTMEAALQDMSADTHLHVSFDVDFLDPSIA CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCC PGVGTTVPGGPNYREAQLVMEMIADTGRMGSLDIVELNPVLDNRNATAELAVDLVESLFG CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHC KSTLMRD CHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9375792 [H]