Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is arcB [H]

Identifier: 84622054

GI number: 84622054

Start: 430148

End: 431071

Strand: Direct

Name: arcB [H]

Synonym: XOO_0397

Alternate gene names: 84622054

Gene position: 430148-431071 (Clockwise)

Preceding gene: 84622049

Following gene: 84622055

Centisome position: 8.71

GC content: 67.64

Gene sequence:

>924_bases
ATGGCAACGCAGTACGTGCCGGTTTCCCTGATTGGCGTTCCCACCGACATCGGCGCCGGCCACCGCGGCGCGCGCATGGG
ACCGGAGGCGCTACGCATCGCCGGACTGCACGAGGCCCTGGTCGGCCGCGGTGTGGAGGTGCGCGACCTGGGCAACCTGG
ATGGCCCGCGCAATCCCTGGCAGGCACCGCAAGCCGGCTACCGGCATCTGGACGAAGTGGTGGCCTGGAACCAGGCGCTG
ATGGGCGCCAGCTACGCCGAACTGCGTGCCGGACGCATGCCGATCATGCTCGGTGGCGACCATTGCCTGGGCATCGGCTC
CATCACCGCGGTGGCCAAGTACTGCCGCGAGCAGGGCCGGCCGTTGCGGGTGCTGTGGCTGGATGCGCACTCGGACTTCA
ACACCAGCGAGGTGACGCCCTCGGGCAATGTGCACGGCATGCCGGTGGCCTGTCTGTGCGGGCTGGGCCCGGAGACGCTG
ACCCATCTGGGCGGCAGTGCGCCGGCGCTGTTGCCCGAGCAGGTACGGCAGATCGGCATCCGCTCGGTGGACCCGGAGGA
GAAGCGGCTGATCAAGCAGCACCGCATCGATGTCTACGACATGCGCTACATCGACGAAGCCGGCATGAAGCGCACCATGG
AGGCCGCGTTGCAGGACATGAGTGCCGACACGCACCTGCATGTGAGCTTCGATGTGGACTTCCTCGACCCCAGCATCGCG
CCGGGCGTGGGCACCACCGTGCCCGGTGGCCCCAACTACCGCGAGGCGCAGCTGGTGATGGAGATGATCGCCGACACCGG
GCGCATGGGGTCGTTGGACATCGTCGAGCTCAACCCGGTGCTGGACAACCGCAACGCGACCGCCGAACTGGCGGTGGATC
TGGTCGAAAGCCTGTTCGGCAAATCGACGCTGATGCGGGATTGA

Upstream 100 bases:

>100_bases
CGCACCGTTCATGGCACGGCCCATGCCGTGTTGCGCTGCTGCGCGTCACGGTGCGGGCGTACCACTAGAATGCTCGGTTT
TATCGATACTGGAGCAATGC

Downstream 100 bases:

>100_bases
TCCAGCGCTGAACGCGGCGCGCCACGTTCACATCAAATCCACGGCCGCGCAGTCAGATTTGGCGCCAAGCTAGGTGCGCT
GGCACCGTTACACAACGAGG

Product: arginase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MATQYVPVSLIGVPTDIGAGHRGARMGPEALRIAGLHEALVGRGVEVRDLGNLDGPRNPWQAPQAGYRHLDEVVAWNQAL
MGASYAELRAGRMPIMLGGDHCLGIGSITAVAKYCREQGRPLRVLWLDAHSDFNTSEVTPSGNVHGMPVACLCGLGPETL
THLGGSAPALLPEQVRQIGIRSVDPEEKRLIKQHRIDVYDMRYIDEAGMKRTMEAALQDMSADTHLHVSFDVDFLDPSIA
PGVGTTVPGGPNYREAQLVMEMIADTGRMGSLDIVELNPVLDNRNATAELAVDLVESLFGKSTLMRD

Sequences:

>Translated_307_residues
MATQYVPVSLIGVPTDIGAGHRGARMGPEALRIAGLHEALVGRGVEVRDLGNLDGPRNPWQAPQAGYRHLDEVVAWNQAL
MGASYAELRAGRMPIMLGGDHCLGIGSITAVAKYCREQGRPLRVLWLDAHSDFNTSEVTPSGNVHGMPVACLCGLGPETL
THLGGSAPALLPEQVRQIGIRSVDPEEKRLIKQHRIDVYDMRYIDEAGMKRTMEAALQDMSADTHLHVSFDVDFLDPSIA
PGVGTTVPGGPNYREAQLVMEMIADTGRMGSLDIVELNPVLDNRNATAELAVDLVESLFGKSTLMRD
>Mature_306_residues
ATQYVPVSLIGVPTDIGAGHRGARMGPEALRIAGLHEALVGRGVEVRDLGNLDGPRNPWQAPQAGYRHLDEVVAWNQALM
GASYAELRAGRMPIMLGGDHCLGIGSITAVAKYCREQGRPLRVLWLDAHSDFNTSEVTPSGNVHGMPVACLCGLGPETLT
HLGGSAPALLPEQVRQIGIRSVDPEEKRLIKQHRIDVYDMRYIDEAGMKRTMEAALQDMSADTHLHVSFDVDFLDPSIAP
GVGTTVPGGPNYREAQLVMEMIADTGRMGSLDIVELNPVLDNRNATAELAVDLVESLFGKSTLMRD

Specific function: Catalyzes The Formation Of Putrescine From Agmatine. [C]

COG id: COG0010

COG function: function code E; Arginase/agmatinase/formimionoglutamate hydrolase, arginase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arginase family [H]

Homologues:

Organism=Homo sapiens, GI4502215, Length=308, Percent_Identity=36.038961038961, Blast_Score=176, Evalue=2e-44,
Organism=Homo sapiens, GI10947139, Length=309, Percent_Identity=34.6278317152104, Blast_Score=162, Evalue=4e-40,
Organism=Escherichia coli, GI1789306, Length=284, Percent_Identity=24.6478873239437, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71996843, Length=207, Percent_Identity=33.3333333333333, Blast_Score=112, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6325146, Length=204, Percent_Identity=38.7254901960784, Blast_Score=142, Evalue=4e-35,
Organism=Drosophila melanogaster, GI24638886, Length=304, Percent_Identity=33.5526315789474, Blast_Score=163, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014033
- InterPro:   IPR006035
- InterPro:   IPR020855 [H]

Pfam domain/function: PF00491 Arginase [H]

EC number: =3.5.3.1 [H]

Molecular weight: Translated: 33162; Mature: 33031

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS00148 ARGINASE_2 ; PS01053 ARGINASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATQYVPVSLIGVPTDIGAGHRGARMGPEALRIAGLHEALVGRGVEVRDLGNLDGPRNPW
CCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC
QAPQAGYRHLDEVVAWNQALMGASYAELRAGRMPIMLGGDHCLGIGSITAVAKYCREQGR
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEECCCCEECHHHHHHHHHHHHHCCC
PLRVLWLDAHSDFNTSEVTPSGNVHGMPVACLCGLGPETLTHLGGSAPALLPEQVRQIGI
CEEEEEEECCCCCCCCCCCCCCCCCCCCHHHEECCCHHHHHHCCCCCCCCCHHHHHHCCC
RSVDPEEKRLIKQHRIDVYDMRYIDEAGMKRTMEAALQDMSADTHLHVSFDVDFLDPSIA
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCC
PGVGTTVPGGPNYREAQLVMEMIADTGRMGSLDIVELNPVLDNRNATAELAVDLVESLFG
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHC
KSTLMRD
CHHHCCC
>Mature Secondary Structure 
ATQYVPVSLIGVPTDIGAGHRGARMGPEALRIAGLHEALVGRGVEVRDLGNLDGPRNPW
CCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC
QAPQAGYRHLDEVVAWNQALMGASYAELRAGRMPIMLGGDHCLGIGSITAVAKYCREQGR
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEECCCCEECHHHHHHHHHHHHHCCC
PLRVLWLDAHSDFNTSEVTPSGNVHGMPVACLCGLGPETLTHLGGSAPALLPEQVRQIGI
CEEEEEEECCCCCCCCCCCCCCCCCCCCHHHEECCCHHHHHHCCCCCCCCCHHHHHHCCC
RSVDPEEKRLIKQHRIDVYDMRYIDEAGMKRTMEAALQDMSADTHLHVSFDVDFLDPSIA
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCC
PGVGTTVPGGPNYREAQLVMEMIADTGRMGSLDIVELNPVLDNRNATAELAVDLVESLFG
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHC
KSTLMRD
CHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9375792 [H]