Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is mchE [H]
Identifier: 84622035
GI number: 84622035
Start: 410856
End: 411326
Strand: Direct
Name: mchE [H]
Synonym: XOO_0378
Alternate gene names: 84622035
Gene position: 410856-411326 (Clockwise)
Preceding gene: 84622034
Following gene: 84622036
Centisome position: 8.32
GC content: 56.48
Gene sequence:
>471_bases GTGACTGCTGCAGAAAAGGGAATATTGACCAAGGTTCAATTATTGCAGCAGCAAGACATCGCGATTCAGAATCAGGGGCA ACTCGAAGAGTTGCAGAAACATGCGTTGGACCTGCGTGTGGAGCACTCTCAACTTCAGTTGCAGCTGGAGCAAACGCCTG CAACCTTGGAAGCAAAGCGCAACGACATCGCCAGGCAGATCGCAGATGTCGCGCAATCCCTTTCGGAAACTGGAGTACGC CGTTCGGTCGTATTGCGTGCGCCAACCGATGGCATGGTCACGAACCTGCTGGTGCATGCAGGGCAACCGGTCGGTGCGCA ACAGCCGCTGATCACCTTGTTATCCAAGGACATCGCGTTGCGCGCCGAGCTGTGGGTGCCTTCCAAGGCAGTTGGATTCG TAACATGCGGCGACCGCGTGCTTCTGCGCTATCAGTGCCTACAGCACGGCGGACCTCGCCGTGTTCATTGA
Upstream 100 bases:
>100_bases GCGTGTCACGCTGCTTGACGCGCAGATGGATAACACTGCCGAGCAGATTCGCTTGCAACGCCAGCGCGCAGAGCGCGCGC TCCGGCTCTAAGAGCAGTGG
Downstream 100 bases:
>100_bases TCGTAACCTCATCATGTCGGGGAAGCCGCAGCGGTACGCAACGCAAAGCCGACGGCAGCTTGTTCAAGTTGGAGAGTCCT GCCGACCTACAACAGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTAAEKGILTKVQLLQQQDIAIQNQGQLEELQKHALDLRVEHSQLQLQLEQTPATLEAKRNDIARQIADVAQSLSETGVR RSVVLRAPTDGMVTNLLVHAGQPVGAQQPLITLLSKDIALRAELWVPSKAVGFVTCGDRVLLRYQCLQHGGPRRVH
Sequences:
>Translated_156_residues MTAAEKGILTKVQLLQQQDIAIQNQGQLEELQKHALDLRVEHSQLQLQLEQTPATLEAKRNDIARQIADVAQSLSETGVR RSVVLRAPTDGMVTNLLVHAGQPVGAQQPLITLLSKDIALRAELWVPSKAVGFVTCGDRVLLRYQCLQHGGPRRVH >Mature_155_residues TAAEKGILTKVQLLQQQDIAIQNQGQLEELQKHALDLRVEHSQLQLQLEQTPATLEAKRNDIARQIADVAQSLSETGVRR SVVLRAPTDGMVTNLLVHAGQPVGAQQPLITLLSKDIALRAELWVPSKAVGFVTCGDRVLLRYQCLQHGGPRRVH
Specific function: Probably involved, in conjunction with mchF, in the secretion of microcin H47 [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 - InterPro: IPR006144 - InterPro: IPR011053 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 17206; Mature: 17075
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAEKGILTKVQLLQQQDIAIQNQGQLEELQKHALDLRVEHSQLQLQLEQTPATLEAKR CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEECHHEEEEECCCCCHHHHHH NDIARQIADVAQSLSETGVRRSVVLRAPTDGMVTNLLVHAGQPVGAQQPLITLLSKDIAL HHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHE RAELWVPSKAVGFVTCGDRVLLRYQCLQHGGPRRVH EEEECCCCCCEEEEECCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TAAEKGILTKVQLLQQQDIAIQNQGQLEELQKHALDLRVEHSQLQLQLEQTPATLEAKR CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEECHHEEEEECCCCCHHHHHH NDIARQIADVAQSLSETGVRRSVVLRAPTDGMVTNLLVHAGQPVGAQQPLITLLSKDIAL HHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHE RAELWVPSKAVGFVTCGDRVLLRYQCLQHGGPRRVH EEEECCCCCCEEEEECCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11181394 [H]