Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622019
Identifier: 84622019
GI number: 84622019
Start: 393802
End: 395631
Strand: Direct
Name: 84622019
Synonym: XOO_0362
Alternate gene names: NA
Gene position: 393802-395631 (Clockwise)
Preceding gene: 84622018
Following gene: 84622021
Centisome position: 7.97
GC content: 66.01
Gene sequence:
>1830_bases ATGGGTAGGGTCGCGCTACCCAATTCGCGGATCTGCCTCATGAAGCCACTGGTTCTCGCCGTTGCGCTGGCGCTCGGTTC CTCGTTGCCGTTGCAGGCACAGACCGGCAAGACTGCGCCGACACAGCCCGCTCGCCCGGCCTGGGTGCAGACCAGCAACA GGTATGCGCAGATCCTGCTCAATGCGCAGGCGCCGTTCCAGCCCGAATACGCAAGCTTTTTCGGTGTGCCTGGCTATGAC GATCAGGTCGTCGACCTGGGCCCGGACAACGCTGCGCGCTATCGCGACGCCATGCGCAAGGCGCGCGCCACGCTGCAGAC CAAGCTGGCTACCGAGCGCGATGCCAATGTGCGCCAGGACCTGCAGATCATGATTGGCGCGGCCGAGCAGAACATCGAAG GCAGCGAGCTCAACGAGCGGTATCTGTTGCCCTGGAGCGACGCTCCCGAGGCAGTCTTCAGTGGCCTCAACGGTCTGCTC TCCGACCAGACCGTGCCCGAGCGCCGCGCCAAGGCGCTGGATCGCCTCAAGCGTTACGTCGGCCTGGTACCGGGAAGCAC GCCCACCACCACGCTGGCGCGCCAGCGCTACGAGGAAAAGCTGAGCAACACCGCGCTGCTGCAGCCCACCCAGCGCGAAG TGGAGCAGGCGCTGGCCAATGTGGACACGTATGTGGCAGGCATCGGGGAGCTGTTCGCCAAGTACAAGATCGCCGGCGCC GACGACGCGCTCAAGGCGATGTCCACGCAACTGAAGGACTACGCCGCCTGGACACGCAGCACCGTGCTGCCCAAGGCGCG CAAGGACACCCGCCTGCCCGAGCCGCTTTACGCTTTTCAGCTCAAGCAGGTCGGGATCGATATCGCGTCGCAGCAGCTCA TCCAGCGCGCGCAACTGGAGTTCATGGAAACCCGCTCGGCCATGCGCCAGCTGGCGCCGCTGGTGGCCAAGGCCAAGGGC GTGCAGGGCGGCGATTATGTGCAGGTGATCCGCGCGCTCAAGGGCAACAAGATCGCCGACGACCAACTGGAAACCCACTA CCGCGGCGTGATCGATCAGATCGACCCGATCATCCGCCAGCAGCGCATTGTCGATGTGCCCAAACGCCCGATGCAGATGC GCCTGGGCAGCGCCGCCGAAAGCGCCGCGCAACCGGCGCCGCACTTCCTGCCGGCCCCGCTGATCGGCAATACCGGCCAG CAGGGCCAGTTCGTGTTGCCGCTGGGCAACCCGACCGCCGATGGCGCCAAGAAAGAGCCGTACGACGACTTCAACTTCGG CTCGGCGGCCTGGACGCTCAGCGCCCACGAAGGCCGCCCCGGTCACGAACTGCAGTTCACCGCCATGGTCGAACGCGGCG TCTCGCTGGCGCGCAGCATGTTCGCCTTCAACTCGGTGAACGTCGAAGGCTGGGCGCTGTATGCGGAAGCGGAAATGGTG CCGTACGAACCGCTCGACGGCCAGCTCATCGCCCTGCAGTTCCGCCTGTTGCGCGCCGCTCGCGCCATGCTCGACCCGAT GCTCAACCTGGGTCTGATCGACAGCGAACGCGCGCGGCAGTTACTGGAAGACGACGTCGGCCTCTCGCCGGCCATGACCC GCCAGGAACTGGACCGCTACACCGTCCGCGCGCCCGGCCAGGCCGGCAGCTACTTCTACGGCTACACCCGCATCCTCGAA CTGCGCATGCGCACCGAACTGGCCCTGGGCAAGAAGTTCGACCGCCTGGCCTTCAATAACTTCCTGCTGGACCAGGGCCT GCTGCCACCGGATCAGCTGGCCAAGGCGGTGGAGACGCAGTTCATTCCGGCGCAGCAAGCCAAGCGCTGA
Upstream 100 bases:
>100_bases CGCGAGGTACATGCCGTTCCGAGCAGCGGCCGCGCCCGCCTGACGGTGAGCGCAGTCGTTTTGTTAGCCGCTCTAAAGCA GATTGCCGCGGACGTTGCAG
Downstream 100 bases:
>100_bases CCAGCTCCGTCGGGTGCAAAAAAACAGGGCGCGATAGAAGGCTGCAAATAGCCTTCCATCGCGCCCTGACGCATTGATGC GGGTGACTCTTTGCGGGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 609; Mature: 608
Protein sequence:
>609_residues MGRVALPNSRICLMKPLVLAVALALGSSLPLQAQTGKTAPTQPARPAWVQTSNRYAQILLNAQAPFQPEYASFFGVPGYD DQVVDLGPDNAARYRDAMRKARATLQTKLATERDANVRQDLQIMIGAAEQNIEGSELNERYLLPWSDAPEAVFSGLNGLL SDQTVPERRAKALDRLKRYVGLVPGSTPTTTLARQRYEEKLSNTALLQPTQREVEQALANVDTYVAGIGELFAKYKIAGA DDALKAMSTQLKDYAAWTRSTVLPKARKDTRLPEPLYAFQLKQVGIDIASQQLIQRAQLEFMETRSAMRQLAPLVAKAKG VQGGDYVQVIRALKGNKIADDQLETHYRGVIDQIDPIIRQQRIVDVPKRPMQMRLGSAAESAAQPAPHFLPAPLIGNTGQ QGQFVLPLGNPTADGAKKEPYDDFNFGSAAWTLSAHEGRPGHELQFTAMVERGVSLARSMFAFNSVNVEGWALYAEAEMV PYEPLDGQLIALQFRLLRAARAMLDPMLNLGLIDSERARQLLEDDVGLSPAMTRQELDRYTVRAPGQAGSYFYGYTRILE LRMRTELALGKKFDRLAFNNFLLDQGLLPPDQLAKAVETQFIPAQQAKR
Sequences:
>Translated_609_residues MGRVALPNSRICLMKPLVLAVALALGSSLPLQAQTGKTAPTQPARPAWVQTSNRYAQILLNAQAPFQPEYASFFGVPGYD DQVVDLGPDNAARYRDAMRKARATLQTKLATERDANVRQDLQIMIGAAEQNIEGSELNERYLLPWSDAPEAVFSGLNGLL SDQTVPERRAKALDRLKRYVGLVPGSTPTTTLARQRYEEKLSNTALLQPTQREVEQALANVDTYVAGIGELFAKYKIAGA DDALKAMSTQLKDYAAWTRSTVLPKARKDTRLPEPLYAFQLKQVGIDIASQQLIQRAQLEFMETRSAMRQLAPLVAKAKG VQGGDYVQVIRALKGNKIADDQLETHYRGVIDQIDPIIRQQRIVDVPKRPMQMRLGSAAESAAQPAPHFLPAPLIGNTGQ QGQFVLPLGNPTADGAKKEPYDDFNFGSAAWTLSAHEGRPGHELQFTAMVERGVSLARSMFAFNSVNVEGWALYAEAEMV PYEPLDGQLIALQFRLLRAARAMLDPMLNLGLIDSERARQLLEDDVGLSPAMTRQELDRYTVRAPGQAGSYFYGYTRILE LRMRTELALGKKFDRLAFNNFLLDQGLLPPDQLAKAVETQFIPAQQAKR >Mature_608_residues GRVALPNSRICLMKPLVLAVALALGSSLPLQAQTGKTAPTQPARPAWVQTSNRYAQILLNAQAPFQPEYASFFGVPGYDD QVVDLGPDNAARYRDAMRKARATLQTKLATERDANVRQDLQIMIGAAEQNIEGSELNERYLLPWSDAPEAVFSGLNGLLS DQTVPERRAKALDRLKRYVGLVPGSTPTTTLARQRYEEKLSNTALLQPTQREVEQALANVDTYVAGIGELFAKYKIAGAD DALKAMSTQLKDYAAWTRSTVLPKARKDTRLPEPLYAFQLKQVGIDIASQQLIQRAQLEFMETRSAMRQLAPLVAKAKGV QGGDYVQVIRALKGNKIADDQLETHYRGVIDQIDPIIRQQRIVDVPKRPMQMRLGSAAESAAQPAPHFLPAPLIGNTGQQ GQFVLPLGNPTADGAKKEPYDDFNFGSAAWTLSAHEGRPGHELQFTAMVERGVSLARSMFAFNSVNVEGWALYAEAEMVP YEPLDGQLIALQFRLLRAARAMLDPMLNLGLIDSERARQLLEDDVGLSPAMTRQELDRYTVRAPGQAGSYFYGYTRILEL RMRTELALGKKFDRLAFNNFLLDQGLLPPDQLAKAVETQFIPAQQAKR
Specific function: Unknown
COG id: COG4805
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67377; Mature: 67246
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRVALPNSRICLMKPLVLAVALALGSSLPLQAQTGKTAPTQPARPAWVQTSNRYAQILL CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEE NAQAPFQPEYASFFGVPGYDDQVVDLGPDNAARYRDAMRKARATLQTKLATERDANVRQD ECCCCCCCCHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LQIMIGAAEQNIEGSELNERYLLPWSDAPEAVFSGLNGLLSDQTVPERRAKALDRLKRYV HHHEEECHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH GLVPGSTPTTTLARQRYEEKLSNTALLQPTQREVEQALANVDTYVAGIGELFAKYKIAGA CCCCCCCCHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DDALKAMSTQLKDYAAWTRSTVLPKARKDTRLPEPLYAFQLKQVGIDIASQQLIQRAQLE HHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FMETRSAMRQLAPLVAKAKGVQGGDYVQVIRALKGNKIADDQLETHYRGVIDQIDPIIRQ HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH QRIVDVPKRPMQMRLGSAAESAAQPAPHFLPAPLIGNTGQQGQFVLPLGNPTADGAKKEP HHHHCCCCCCHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC YDDFNFGSAAWTLSAHEGRPGHELQFTAMVERGVSLARSMFAFNSVNVEGWALYAEAEMV CCCCCCCCEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC PYEPLDGQLIALQFRLLRAARAMLDPMLNLGLIDSERARQLLEDDVGLSPAMTRQELDRY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH TVRAPGQAGSYFYGYTRILELRMRTELALGKKFDRLAFNNFLLDQGLLPPDQLAKAVETQ EEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FIPAQQAKR CCCHHHCCC >Mature Secondary Structure GRVALPNSRICLMKPLVLAVALALGSSLPLQAQTGKTAPTQPARPAWVQTSNRYAQILL CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEE NAQAPFQPEYASFFGVPGYDDQVVDLGPDNAARYRDAMRKARATLQTKLATERDANVRQD ECCCCCCCCHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LQIMIGAAEQNIEGSELNERYLLPWSDAPEAVFSGLNGLLSDQTVPERRAKALDRLKRYV HHHEEECHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH GLVPGSTPTTTLARQRYEEKLSNTALLQPTQREVEQALANVDTYVAGIGELFAKYKIAGA CCCCCCCCHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DDALKAMSTQLKDYAAWTRSTVLPKARKDTRLPEPLYAFQLKQVGIDIASQQLIQRAQLE HHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FMETRSAMRQLAPLVAKAKGVQGGDYVQVIRALKGNKIADDQLETHYRGVIDQIDPIIRQ HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH QRIVDVPKRPMQMRLGSAAESAAQPAPHFLPAPLIGNTGQQGQFVLPLGNPTADGAKKEP HHHHCCCCCCHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC YDDFNFGSAAWTLSAHEGRPGHELQFTAMVERGVSLARSMFAFNSVNVEGWALYAEAEMV CCCCCCCCEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC PYEPLDGQLIALQFRLLRAARAMLDPMLNLGLIDSERARQLLEDDVGLSPAMTRQELDRY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH TVRAPGQAGSYFYGYTRILELRMRTELALGKKFDRLAFNNFLLDQGLLPPDQLAKAVETQ EEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FIPAQQAKR CCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA