Click here to switch to the map view.

The map label for this gene is yuaR [C]

Identifier: 84622007

GI number: 84622007

Start: 377456

End: 379057

Strand: Direct

Name: yuaR [C]

Synonym: XOO_0350

Alternate gene names: 84622007

Gene position: 377456-379057 (Clockwise)

Preceding gene: 84622006

Following gene: 84622008

Centisome position: 7.64

GC content: 66.73

Gene sequence:

>1602_bases
ATGACGATGGTCAAGCAATCCACAATGGTGGCGGCAATGCTGATTGCGATGCTGGCTGCCGGATGCCAGCGCGCCGCAGC
GCCCGCCGCAGCACACGACGTTGCGGGAAAACCCACCGCGACAGCGCCGGGTACGGCTGTGCAGCGGCCCGCGTCAAAAA
CGCCGCCGGGCAATGCCGCAGGCCATCGTTTCGGCACGTTGCTGTTCACGCCGTGCACGCTGAGCGCTGGTGGTGCTGCC
GGCAACATCGAAGCGCAGTGCGCGAGCTTGCGCGTGCCGGAGAATCCGGCCGCGCCGAGCGGGCGCAGTATTGCGTTGAA
GATCGCGTGGCTGGAGAGCGAAGCCGGCGGCGGCAGCACGCCCGACCCGGTGTTCTTCATTGCCGGTGGACCGGGGCAAT
CGGCCACCGAAGTGGCGGCGATCGTGGACATGGGGTTGCACGAAGTCCGCAAGCAGCGCGACATTTTTCTGGTCGATCAG
CGCGGCACCGGTGGCTCGCATCCGCTGGAGTGTCGCGACGCGGCCGGCAAGCCGCTGGCGCTGGAGAACGGCAGCCAGGC
CACCGCCGAGCAATTGACCGCGTATGCAGGCCAATGCGCCGCCGGCCTGCGTGACGATGCCGACCCGCGTTACTACACCA
CCAGCGAAGCCATTGGCGATCTGGATGCCGTGCGCGCGGCACTGGGCGTGCAGTCGCTCAATCTGATTGGTGCCTCGTAC
GGCACACGTGTGGCCCAGCACTATGCCGCACGCTATCGGCAACACACGCGCACCGTGGTGATCGATGGCGTGGCGCCGAA
CGATCTGGTGATCGGCGGCGAATTCGCGCGTACGTTCGAAGATGCGATCGCGCTGCAGTCCGCGCAATGCCGTCAGCAGC
CTGCCTGCGCCAAGCGTTTTCCGGTCGATACCGCCACGCAGTTGCGCCAGGTGGTCGAGCGGCTGCGGCAGGCACCGGTG
GCGGTGGAGTATCGCGATCCGCGCACGGGTGCCTTGCGCCACGAACAGGTCACTGCCGACACCGTGGCGGGCCTGGCGTT
CGGGTTTTCGTATGCGCCGGAAACCGCCTCGCTGTTGCCGCTGGTACTCGATGAAGCGGCCGCAGGCCGGTATGCCTCGT
TGATGGCGTTGGCGCAGATGAGCGCGTCGAGCATGTCCGATCAGATGAATCGTCTGATGCAATGGTCGGTGTTGTGCAGC
GAAGACGCCGGGCGTTATCACCCGCCCGCCCACCAGGCGACGACGCTGCTGGGCAACGAGGTGGCCGAGATGTTCTTCGC
GCCGTGCAAGGTGTGGCCCTCCACGCCGGCACCGGCCGCTGAGAGCGCGCCGTTCCGCTCGACGCTGCCGGTCTTGCTGC
TCTCCGGCCAGCTCGATCCGGTCACGCCGCCACGCTATGCCGAGCGGGTGCTGCAGGGCCTGCCCAACGGCCGGCATGTG
ATTGCGCCCGGGCAGGGGCATGGCGTGTTTCGGCTGGGCTGCATGCCCAAGGTACTAAGTCAGTTTATGCAGACCGCCGA
TGCCAAGACGCTGGATACCACCTGCGTTGCCAGCCTCAACACCGTGCCCGCCTTCACCTCGTTCAACGGATGGGAACCAT
GA

Upstream 100 bases:

>100_bases
GTCGATCGAGCATGTTTTTCTTTACGAAGACGCGCAGTAGTTGCCGCGGTCGCATGTGGCCGTCTGCAACGTCAGGGGAC
AGGCAATACCAGGAGATAGG

Downstream 100 bases:

>100_bases
GCCGCATCGACCACGCCACGGAGGCGCTCGCATGATCGTCGTCGATACTCTGCATAAGTCGTTCAAGACCAAGGCCGGGC
TGGTGAAAGCCGTCGACGGT

Product: cysteine proteinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 532

Protein sequence:

>533_residues
MTMVKQSTMVAAMLIAMLAAGCQRAAAPAAAHDVAGKPTATAPGTAVQRPASKTPPGNAAGHRFGTLLFTPCTLSAGGAA
GNIEAQCASLRVPENPAAPSGRSIALKIAWLESEAGGGSTPDPVFFIAGGPGQSATEVAAIVDMGLHEVRKQRDIFLVDQ
RGTGGSHPLECRDAAGKPLALENGSQATAEQLTAYAGQCAAGLRDDADPRYYTTSEAIGDLDAVRAALGVQSLNLIGASY
GTRVAQHYAARYRQHTRTVVIDGVAPNDLVIGGEFARTFEDAIALQSAQCRQQPACAKRFPVDTATQLRQVVERLRQAPV
AVEYRDPRTGALRHEQVTADTVAGLAFGFSYAPETASLLPLVLDEAAAGRYASLMALAQMSASSMSDQMNRLMQWSVLCS
EDAGRYHPPAHQATTLLGNEVAEMFFAPCKVWPSTPAPAAESAPFRSTLPVLLLSGQLDPVTPPRYAERVLQGLPNGRHV
IAPGQGHGVFRLGCMPKVLSQFMQTADAKTLDTTCVASLNTVPAFTSFNGWEP

Sequences:

>Translated_533_residues
MTMVKQSTMVAAMLIAMLAAGCQRAAAPAAAHDVAGKPTATAPGTAVQRPASKTPPGNAAGHRFGTLLFTPCTLSAGGAA
GNIEAQCASLRVPENPAAPSGRSIALKIAWLESEAGGGSTPDPVFFIAGGPGQSATEVAAIVDMGLHEVRKQRDIFLVDQ
RGTGGSHPLECRDAAGKPLALENGSQATAEQLTAYAGQCAAGLRDDADPRYYTTSEAIGDLDAVRAALGVQSLNLIGASY
GTRVAQHYAARYRQHTRTVVIDGVAPNDLVIGGEFARTFEDAIALQSAQCRQQPACAKRFPVDTATQLRQVVERLRQAPV
AVEYRDPRTGALRHEQVTADTVAGLAFGFSYAPETASLLPLVLDEAAAGRYASLMALAQMSASSMSDQMNRLMQWSVLCS
EDAGRYHPPAHQATTLLGNEVAEMFFAPCKVWPSTPAPAAESAPFRSTLPVLLLSGQLDPVTPPRYAERVLQGLPNGRHV
IAPGQGHGVFRLGCMPKVLSQFMQTADAKTLDTTCVASLNTVPAFTSFNGWEP
>Mature_532_residues
TMVKQSTMVAAMLIAMLAAGCQRAAAPAAAHDVAGKPTATAPGTAVQRPASKTPPGNAAGHRFGTLLFTPCTLSAGGAAG
NIEAQCASLRVPENPAAPSGRSIALKIAWLESEAGGGSTPDPVFFIAGGPGQSATEVAAIVDMGLHEVRKQRDIFLVDQR
GTGGSHPLECRDAAGKPLALENGSQATAEQLTAYAGQCAAGLRDDADPRYYTTSEAIGDLDAVRAALGVQSLNLIGASYG
TRVAQHYAARYRQHTRTVVIDGVAPNDLVIGGEFARTFEDAIALQSAQCRQQPACAKRFPVDTATQLRQVVERLRQAPVA
VEYRDPRTGALRHEQVTADTVAGLAFGFSYAPETASLLPLVLDEAAAGRYASLMALAQMSASSMSDQMNRLMQWSVLCSE
DAGRYHPPAHQATTLLGNEVAEMFFAPCKVWPSTPAPAAESAPFRSTLPVLLLSGQLDPVTPPRYAERVLQGLPNGRHVI
APGQGHGVFRLGCMPKVLSQFMQTADAKTLDTTCVASLNTVPAFTSFNGWEP

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S33 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 55987; Mature: 55856

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMVKQSTMVAAMLIAMLAAGCQRAAAPAAAHDVAGKPTATAPGTAVQRPASKTPPGNAA
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCC
GHRFGTLLFTPCTLSAGGAAGNIEAQCASLRVPENPAAPSGRSIALKIAWLESEAGGGST
CCCCCEEEEECCCCCCCCCCCCCCHHHHEEECCCCCCCCCCCEEEEEEEEEECCCCCCCC
PDPVFFIAGGPGQSATEVAAIVDMGLHEVRKQRDIFLVDQRGTGGSHPLECRDAAGKPLA
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHCCCCCEE
LENGSQATAEQLTAYAGQCAAGLRDDADPRYYTTSEAIGDLDAVRAALGVQSLNLIGASY
ECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
GTRVAQHYAARYRQHTRTVVIDGVAPNDLVIGGEFARTFEDAIALQSAQCRQQPACAKRF
HHHHHHHHHHHHHHCCCEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHC
PVDTATQLRQVVERLRQAPVAVEYRDPRTGALRHEQVTADTVAGLAFGFSYAPETASLLP
CCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
LVLDEAAAGRYASLMALAQMSASSMSDQMNRLMQWSVLCSEDAGRYHPPAHQATTLLGNE
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
VAEMFFAPCKVWPSTPAPAAESAPFRSTLPVLLLSGQLDPVTPPRYAERVLQGLPNGRHV
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCEE
IAPGQGHGVFRLGCMPKVLSQFMQTADAKTLDTTCVASLNTVPAFTSFNGWEP
EECCCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TMVKQSTMVAAMLIAMLAAGCQRAAAPAAAHDVAGKPTATAPGTAVQRPASKTPPGNAA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCC
GHRFGTLLFTPCTLSAGGAAGNIEAQCASLRVPENPAAPSGRSIALKIAWLESEAGGGST
CCCCCEEEEECCCCCCCCCCCCCCHHHHEEECCCCCCCCCCCEEEEEEEEEECCCCCCCC
PDPVFFIAGGPGQSATEVAAIVDMGLHEVRKQRDIFLVDQRGTGGSHPLECRDAAGKPLA
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHCCCCCEE
LENGSQATAEQLTAYAGQCAAGLRDDADPRYYTTSEAIGDLDAVRAALGVQSLNLIGASY
ECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
GTRVAQHYAARYRQHTRTVVIDGVAPNDLVIGGEFARTFEDAIALQSAQCRQQPACAKRF
HHHHHHHHHHHHHHCCCEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHC
PVDTATQLRQVVERLRQAPVAVEYRDPRTGALRHEQVTADTVAGLAFGFSYAPETASLLP
CCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
LVLDEAAAGRYASLMALAQMSASSMSDQMNRLMQWSVLCSEDAGRYHPPAHQATTLLGNE
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
VAEMFFAPCKVWPSTPAPAAESAPFRSTLPVLLLSGQLDPVTPPRYAERVLQGLPNGRHV
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCEE
IAPGQGHGVFRLGCMPKVLSQFMQTADAKTLDTTCVASLNTVPAFTSFNGWEP
EECCCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]