Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489467
Identifier: 84489467
GI number: 84489467
Start: 768728
End: 769483
Strand: Direct
Name: 84489467
Synonym: Msp_0658
Alternate gene names: NA
Gene position: 768728-769483 (Clockwise)
Preceding gene: 84489466
Following gene: 84489469
Centisome position: 43.49
GC content: 25.53
Gene sequence:
>756_bases GTGTTGAATAATATGGAATCTATAGTTAAACTAGATGATATTACAATTAAAGAATGGGAAAATGGAGTTATTGAATTTGA AGTAACTGATGAAAATAATAATCCTATTAGTGGAGATGCTGCAGTAAAACTTAATGATAGTACTTTTCTTAAAGGAAAAG TTGTTAATGGTAAATTTTCAGAAAAATGTTCCTTCCAAGAAATTCATAATGAATCATACGATATAGAAGTAGTTTTTGAT GGAAATGAAGAATGTAATGCAAGTAGAGCATATGCAAAGTTATATGTTAAAAAAATAGATCCTATTATAATATCATTCCA TGATTTACAAAATGCAGGTTATAGATTAGTTAAATGGATTAATATTAATAAAAGATTACCTGGAAAAATATCAATAAATA ATCATCAAATATCAATAGGACATCTATTATATATCTTTTCAGATGCAGTGATAAATCTTAATAATAATATAACTGATGAT CTTGAATTAACAGGTATTGCTACACCAAGAGTATCAAGTGAAAATCTTAAATGTAATGTGATTGTCTCAAAAGAAGAAAT TGTTGAAATTAGCGAAGCTATAATTGTTTATTCAAAAGAAAATAATGAATTACCTTCTACTATAGAAACTTCAAAAGGAA AAATAGGATTTATGAACTTATTATATACTTTAGCAGTTGTTATTGCTAATAGTTCATCAACTGGTCTTTTAAATAATGTT AATGTAAGACCTTGGAAAGAAATTGTTGCTAAGTAG
Upstream 100 bases:
>100_bases AGAACTATATATTTTTCAGATAATTTTCAATAAAAAAACAATAATCTTTTAAAAAATAAGTTACAAAGTAATAAATAGAT TACTAGGAATTTAAATAAGA
Downstream 100 bases:
>100_bases AAAAACAACATTTTCTTTTTTTAAGTACTTCTAACAAAATACTTCACTACGTGGCATATATTCACATAAATGTATTTCTT TTTTTGTAGCATCAATTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MLNNMESIVKLDDITIKEWENGVIEFEVTDENNNPISGDAAVKLNDSTFLKGKVVNGKFSEKCSFQEIHNESYDIEVVFD GNEECNASRAYAKLYVKKIDPIIISFHDLQNAGYRLVKWININKRLPGKISINNHQISIGHLLYIFSDAVINLNNNITDD LELTGIATPRVSSENLKCNVIVSKEEIVEISEAIIVYSKENNELPSTIETSKGKIGFMNLLYTLAVVIANSSSTGLLNNV NVRPWKEIVAK
Sequences:
>Translated_251_residues MLNNMESIVKLDDITIKEWENGVIEFEVTDENNNPISGDAAVKLNDSTFLKGKVVNGKFSEKCSFQEIHNESYDIEVVFD GNEECNASRAYAKLYVKKIDPIIISFHDLQNAGYRLVKWININKRLPGKISINNHQISIGHLLYIFSDAVINLNNNITDD LELTGIATPRVSSENLKCNVIVSKEEIVEISEAIIVYSKENNELPSTIETSKGKIGFMNLLYTLAVVIANSSSTGLLNNV NVRPWKEIVAK >Mature_251_residues MLNNMESIVKLDDITIKEWENGVIEFEVTDENNNPISGDAAVKLNDSTFLKGKVVNGKFSEKCSFQEIHNESYDIEVVFD GNEECNASRAYAKLYVKKIDPIIISFHDLQNAGYRLVKWININKRLPGKISINNHQISIGHLLYIFSDAVINLNNNITDD LELTGIATPRVSSENLKCNVIVSKEEIVEISEAIIVYSKENNELPSTIETSKGKIGFMNLLYTLAVVIANSSSTGLLNNV NVRPWKEIVAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28107; Mature: 28107
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNNMESIVKLDDITIKEWENGVIEFEVTDENNNPISGDAAVKLNDSTFLKGKVVNGKFS CCCCHHHHEEECCEEEEECCCCEEEEEEECCCCCCCCCCEEEEECCCEEEEEEEECCCCC EKCSFQEIHNESYDIEVVFDGNEECNASRAYAKLYVKKIDPIIISFHDLQNAGYRLVKWI CCCCHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHEECCCEEEEEEECCCCCCEEEEEEE NINKRLPGKISINNHQISIGHLLYIFSDAVINLNNNITDDLELTGIATPRVSSENLKCNV ECCCCCCCEEEECCCEEEHHEEEEEEECEEEEECCCCCCCEEEEEEECCCCCCCCEEEEE IVSKEEIVEISEAIIVYSKENNELPSTIETSKGKIGFMNLLYTLAVVIANSSSTGLLNNV EECHHHHHEEEEEEEEEECCCCCCCCCEECCCCCCHHHHHHHHHHEEEECCCCCCEEECC NVRPWKEIVAK CCCHHHHHHCC >Mature Secondary Structure MLNNMESIVKLDDITIKEWENGVIEFEVTDENNNPISGDAAVKLNDSTFLKGKVVNGKFS CCCCHHHHEEECCEEEEECCCCEEEEEEECCCCCCCCCCEEEEECCCEEEEEEEECCCCC EKCSFQEIHNESYDIEVVFDGNEECNASRAYAKLYVKKIDPIIISFHDLQNAGYRLVKWI CCCCHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHEECCCEEEEEEECCCCCCEEEEEEE NINKRLPGKISINNHQISIGHLLYIFSDAVINLNNNITDDLELTGIATPRVSSENLKCNV ECCCCCCCEEEECCCEEEHHEEEEEEECEEEEECCCCCCCEEEEEEECCCCCCCCEEEEE IVSKEEIVEISEAIIVYSKENNELPSTIETSKGKIGFMNLLYTLAVVIANSSSTGLLNNV EECHHHHHEEEEEEEEEECCCCCCCCCEECCCCCCHHHHHHHHHHEEEECCCCCCEEECC NVRPWKEIVAK CCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA