Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84489459

Identifier: 84489459

GI number: 84489459

Start: 759354

End: 761213

Strand: Direct

Name: 84489459

Synonym: Msp_0650

Alternate gene names: NA

Gene position: 759354-761213 (Clockwise)

Preceding gene: 84489458

Following gene: 84489460

Centisome position: 42.96

GC content: 30.81

Gene sequence:

>1860_bases
TTGGTTAAAATAGTGCCAGATACTAGTATAATTATAGATCAACAAGTAAGTGTTTTAGTTCAAGATTTATATAAAGGTGC
AGAAGTATTAATACCAGAGGCTGTTCCATCAGAAATTGAAAACCATGCAAATAAAAGAAAAGAAATAGGTTATCAAGGAC
TTGAAGAATTAAAAAAACTACAACAACTAAGTACTGAAGGAATAATAACATTAGAATATGTTGGAAGAAGACCTAAACTA
GATGAAATATCCATAGCAGGTGGTGGGGAAATTGATGCTATGATAAGAGATATTGCAAGAAAATATCATGCAATTCTAGT
AACAAGTGATAAATTACAGAAAGAAATAGCAGAAGCACAAGGTGTGGAAACATATTTCTATAAAAAAGAAGTAGAACCTA
TTTCAACTGGTCCAACAGAACTAGAATCATATTTCTCAAAGGATATATCATCAATACATTTACGGGAAAATACAACACCC
ATGGCAAAAAAAGGAACACCAGGTCATATTGAATTAATAGAACTAGATTATGTTCCATTAAGATATAGGGATTTAGATAG
AATATCAAAGGAAATTATAGAACAATCAAAGAAAAGACATGATTGTTTTATTGAAATTGATAAAAGAGGAGCTACAGTAA
TTCAATTTGGAGATTTAAGAGTAACTATTGCAAAACCACCATTTTCTGATGGATTTGAAATAACTGCAATAAAACCTGTG
AATAAACTTGACTTGGATGATTATGATGTATCTGATAAATTACTTGAAAGATTATCAAACGATGCAAAAGGAATACTCAT
AGCAGGATCTCCTGGTGCAGGTAAGTCAACATTTGCACAGGCTCTTGCAGAGTATTATTATTATGATATGGAACAAATGG
TAAAAACCATGGAATCTCCAAGAGATTTGAATTTAGATGATAACATAACACAATATGCACCTCTTGAGGGAGATATGGAA
AATACTGCAGATATACTTCTTCTTGTAAGACCTGACTTCACAATATTTGATGAAGTTAGAAAAACAAGGGATTTTGAAAT
CTATTCTGATATGAGATTAGCTGGTGTTGGAATGATAGGAGTAGTTCATGCTACACGAGCAATTGATGCTGTTCAAAGAT
TTATTGGACGACTTGAATTAGGTGTTATTCCATCTGTAATTGATACAACAATTTATATTAATAATGGTGAAATAGATACA
GTATATTCAATAGAATTAACAGTAAAAGTTCCAACAGGTATGCTTGAAGCTGACTTGTCACGACCTGTAATTGAAATAAA
AGACTTTGAAAGTGGTGAATTATTCTATGAAATATATACATATGGTGAACAAACTATAGTGATGGATATTAATAAAACTC
AAAGACAGGATGATGATAAAGAAGATCAAAAGAGTCCTGTTAGTAAAATTGTTGAAAGAGTTATAAGAAAAGAAGTAAAT
AAGGTGGCTCCACATGCAATTATGGAAGTATCCTTGATATCAGATAAACGTGCACTTCTTGAAATTGATCCAGATCATAC
TGGTGCTGTTATTGGTAAAAATGGAAGAACAATAGCACAAATTGAAGAACGTGCTGGTATTAGTATTGAAGTTGAAGAAT
TAGAAGTAAAGGATATTGATAATAGATCACCTATAAATGTAAATGTTTCTGGTAATTATTTATCATTAAACTTTAGAAAA
GAAGATATTGGTTCTAGCTATGATATTATAGTAGAAGATGAATATCTATTCACAGCAACAGTTGGTAAAAAGGCAAATAT
TCGTCTTAAAAAAGATATTGAAATGGCAGAAATTGTTATTGAAGCCATGAAAAAAGGTGAACCAGTGTATGCTAGATTAA
GAAATGAGGATTTATATTGA

Upstream 100 bases:

>100_bases
TTTTTATAAGAAATTATCAGATGATGGAGAAGTTGTGACTGAATATGAAGATAAGGTATTTGACCCTGAAGATGTATATG
AAAAATAAGGAGATGTTTTA

Downstream 100 bases:

>100_bases
GGTTATTAAAATGAAAATTAGTGTTTCAACATTAGGATTATATCCTGCAACAATGGAAAATATTTTAGACTTTGTAACAG
AACAAAAATTAGATTATCTT

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 619; Mature: 619

Protein sequence:

>619_residues
MVKIVPDTSIIIDQQVSVLVQDLYKGAEVLIPEAVPSEIENHANKRKEIGYQGLEELKKLQQLSTEGIITLEYVGRRPKL
DEISIAGGGEIDAMIRDIARKYHAILVTSDKLQKEIAEAQGVETYFYKKEVEPISTGPTELESYFSKDISSIHLRENTTP
MAKKGTPGHIELIELDYVPLRYRDLDRISKEIIEQSKKRHDCFIEIDKRGATVIQFGDLRVTIAKPPFSDGFEITAIKPV
NKLDLDDYDVSDKLLERLSNDAKGILIAGSPGAGKSTFAQALAEYYYYDMEQMVKTMESPRDLNLDDNITQYAPLEGDME
NTADILLLVRPDFTIFDEVRKTRDFEIYSDMRLAGVGMIGVVHATRAIDAVQRFIGRLELGVIPSVIDTTIYINNGEIDT
VYSIELTVKVPTGMLEADLSRPVIEIKDFESGELFYEIYTYGEQTIVMDINKTQRQDDDKEDQKSPVSKIVERVIRKEVN
KVAPHAIMEVSLISDKRALLEIDPDHTGAVIGKNGRTIAQIEERAGISIEVEELEVKDIDNRSPINVNVSGNYLSLNFRK
EDIGSSYDIIVEDEYLFTATVGKKANIRLKKDIEMAEIVIEAMKKGEPVYARLRNEDLY

Sequences:

>Translated_619_residues
MVKIVPDTSIIIDQQVSVLVQDLYKGAEVLIPEAVPSEIENHANKRKEIGYQGLEELKKLQQLSTEGIITLEYVGRRPKL
DEISIAGGGEIDAMIRDIARKYHAILVTSDKLQKEIAEAQGVETYFYKKEVEPISTGPTELESYFSKDISSIHLRENTTP
MAKKGTPGHIELIELDYVPLRYRDLDRISKEIIEQSKKRHDCFIEIDKRGATVIQFGDLRVTIAKPPFSDGFEITAIKPV
NKLDLDDYDVSDKLLERLSNDAKGILIAGSPGAGKSTFAQALAEYYYYDMEQMVKTMESPRDLNLDDNITQYAPLEGDME
NTADILLLVRPDFTIFDEVRKTRDFEIYSDMRLAGVGMIGVVHATRAIDAVQRFIGRLELGVIPSVIDTTIYINNGEIDT
VYSIELTVKVPTGMLEADLSRPVIEIKDFESGELFYEIYTYGEQTIVMDINKTQRQDDDKEDQKSPVSKIVERVIRKEVN
KVAPHAIMEVSLISDKRALLEIDPDHTGAVIGKNGRTIAQIEERAGISIEVEELEVKDIDNRSPINVNVSGNYLSLNFRK
EDIGSSYDIIVEDEYLFTATVGKKANIRLKKDIEMAEIVIEAMKKGEPVYARLRNEDLY
>Mature_619_residues
MVKIVPDTSIIIDQQVSVLVQDLYKGAEVLIPEAVPSEIENHANKRKEIGYQGLEELKKLQQLSTEGIITLEYVGRRPKL
DEISIAGGGEIDAMIRDIARKYHAILVTSDKLQKEIAEAQGVETYFYKKEVEPISTGPTELESYFSKDISSIHLRENTTP
MAKKGTPGHIELIELDYVPLRYRDLDRISKEIIEQSKKRHDCFIEIDKRGATVIQFGDLRVTIAKPPFSDGFEITAIKPV
NKLDLDDYDVSDKLLERLSNDAKGILIAGSPGAGKSTFAQALAEYYYYDMEQMVKTMESPRDLNLDDNITQYAPLEGDME
NTADILLLVRPDFTIFDEVRKTRDFEIYSDMRLAGVGMIGVVHATRAIDAVQRFIGRLELGVIPSVIDTTIYINNGEIDT
VYSIELTVKVPTGMLEADLSRPVIEIKDFESGELFYEIYTYGEQTIVMDINKTQRQDDDKEDQKSPVSKIVERVIRKEVN
KVAPHAIMEVSLISDKRALLEIDPDHTGAVIGKNGRTIAQIEERAGISIEVEELEVKDIDNRSPINVNVSGNYLSLNFRK
EDIGSSYDIIVEDEYLFTATVGKKANIRLKKDIEMAEIVIEAMKKGEPVYARLRNEDLY

Specific function: Unknown

COG id: COG1855

COG function: function code R; ATPase (PilT family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004087
- InterPro:   IPR009019
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR002716
- InterPro:   IPR006596
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E; PF00013 KH_1; PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 69859; Mature: 69859

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS50084 KH_TYPE_1 ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKIVPDTSIIIDQQVSVLVQDLYKGAEVLIPEAVPSEIENHANKRKEIGYQGLEELKKL
CEEECCCCCEEEHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHH
QQLSTEGIITLEYVGRRPKLDEISIAGGGEIDAMIRDIARKYHAILVTSDKLQKEIAEAQ
HHHCCCCEEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHEEEEEECHHHHHHHHHHC
GVETYFYKKEVEPISTGPTELESYFSKDISSIHLRENTTPMAKKGTPGHIELIELDYVPL
CCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCC
RYRDLDRISKEIIEQSKKRHDCFIEIDKRGATVIQFGDLRVTIAKPPFSDGFEITAIKPV
CHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCEEEEEECCCCCCCEEEEEECCC
NKLDLDDYDVSDKLLERLSNDAKGILIAGSPGAGKSTFAQALAEYYYYDMEQMVKTMESP
CCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
RDLNLDDNITQYAPLEGDMENTADILLLVRPDFTIFDEVRKTRDFEIYSDMRLAGVGMIG
CCCCCCCCCCEECCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCEECCCCHHH
VVHATRAIDAVQRFIGRLELGVIPSVIDTTIYINNGEIDTVYSIELTVKVPTGMLEADLS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEEEEEEECCCCHHHHHCC
RPVIEIKDFESGELFYEIYTYGEQTIVMDINKTQRQDDDKEDQKSPVSKIVERVIRKEVN
CCEEEEECCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
KVAPHAIMEVSLISDKRALLEIDPDHTGAVIGKNGRTIAQIEERAGISIEVEELEVKDID
HHCCHHHEEEEEECCCCEEEEECCCCCCEEECCCCCEEEEEHHHCCCEEEEEEEEEECCC
NRSPINVNVSGNYLSLNFRKEDIGSSYDIIVEDEYLFTATVGKKANIRLKKDIEMAEIVI
CCCCEEEEECCCEEEEEEEHHHCCCCCEEEEECCEEEEEECCCCCCEEEECCCHHHHHHH
EAMKKGEPVYARLRNEDLY
HHHHCCCCEEEEECCCCCC
>Mature Secondary Structure
MVKIVPDTSIIIDQQVSVLVQDLYKGAEVLIPEAVPSEIENHANKRKEIGYQGLEELKKL
CEEECCCCCEEEHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHH
QQLSTEGIITLEYVGRRPKLDEISIAGGGEIDAMIRDIARKYHAILVTSDKLQKEIAEAQ
HHHCCCCEEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHEEEEEECHHHHHHHHHHC
GVETYFYKKEVEPISTGPTELESYFSKDISSIHLRENTTPMAKKGTPGHIELIELDYVPL
CCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCC
RYRDLDRISKEIIEQSKKRHDCFIEIDKRGATVIQFGDLRVTIAKPPFSDGFEITAIKPV
CHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCEEEEEECCCCCCCEEEEEECCC
NKLDLDDYDVSDKLLERLSNDAKGILIAGSPGAGKSTFAQALAEYYYYDMEQMVKTMESP
CCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
RDLNLDDNITQYAPLEGDMENTADILLLVRPDFTIFDEVRKTRDFEIYSDMRLAGVGMIG
CCCCCCCCCCEECCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCEECCCCHHH
VVHATRAIDAVQRFIGRLELGVIPSVIDTTIYINNGEIDTVYSIELTVKVPTGMLEADLS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEEEEEEECCCCHHHHHCC
RPVIEIKDFESGELFYEIYTYGEQTIVMDINKTQRQDDDKEDQKSPVSKIVERVIRKEVN
CCEEEEECCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
KVAPHAIMEVSLISDKRALLEIDPDHTGAVIGKNGRTIAQIEERAGISIEVEELEVKDID
HHCCHHHEEEEEECCCCEEEEECCCCCCEEECCCCCEEEEEHHHCCCEEEEEEEEEECCC
NRSPINVNVSGNYLSLNFRKEDIGSSYDIIVEDEYLFTATVGKKANIRLKKDIEMAEIVI
CCCCEEEEECCCEEEEEEEHHHCCCCCEEEEECCEEEEEECCCCCCEEEECCCHHHHHHH
EAMKKGEPVYARLRNEDLY
HHHHCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]