Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489459
Identifier: 84489459
GI number: 84489459
Start: 759354
End: 761213
Strand: Direct
Name: 84489459
Synonym: Msp_0650
Alternate gene names: NA
Gene position: 759354-761213 (Clockwise)
Preceding gene: 84489458
Following gene: 84489460
Centisome position: 42.96
GC content: 30.81
Gene sequence:
>1860_bases TTGGTTAAAATAGTGCCAGATACTAGTATAATTATAGATCAACAAGTAAGTGTTTTAGTTCAAGATTTATATAAAGGTGC AGAAGTATTAATACCAGAGGCTGTTCCATCAGAAATTGAAAACCATGCAAATAAAAGAAAAGAAATAGGTTATCAAGGAC TTGAAGAATTAAAAAAACTACAACAACTAAGTACTGAAGGAATAATAACATTAGAATATGTTGGAAGAAGACCTAAACTA GATGAAATATCCATAGCAGGTGGTGGGGAAATTGATGCTATGATAAGAGATATTGCAAGAAAATATCATGCAATTCTAGT AACAAGTGATAAATTACAGAAAGAAATAGCAGAAGCACAAGGTGTGGAAACATATTTCTATAAAAAAGAAGTAGAACCTA TTTCAACTGGTCCAACAGAACTAGAATCATATTTCTCAAAGGATATATCATCAATACATTTACGGGAAAATACAACACCC ATGGCAAAAAAAGGAACACCAGGTCATATTGAATTAATAGAACTAGATTATGTTCCATTAAGATATAGGGATTTAGATAG AATATCAAAGGAAATTATAGAACAATCAAAGAAAAGACATGATTGTTTTATTGAAATTGATAAAAGAGGAGCTACAGTAA TTCAATTTGGAGATTTAAGAGTAACTATTGCAAAACCACCATTTTCTGATGGATTTGAAATAACTGCAATAAAACCTGTG AATAAACTTGACTTGGATGATTATGATGTATCTGATAAATTACTTGAAAGATTATCAAACGATGCAAAAGGAATACTCAT AGCAGGATCTCCTGGTGCAGGTAAGTCAACATTTGCACAGGCTCTTGCAGAGTATTATTATTATGATATGGAACAAATGG TAAAAACCATGGAATCTCCAAGAGATTTGAATTTAGATGATAACATAACACAATATGCACCTCTTGAGGGAGATATGGAA AATACTGCAGATATACTTCTTCTTGTAAGACCTGACTTCACAATATTTGATGAAGTTAGAAAAACAAGGGATTTTGAAAT CTATTCTGATATGAGATTAGCTGGTGTTGGAATGATAGGAGTAGTTCATGCTACACGAGCAATTGATGCTGTTCAAAGAT TTATTGGACGACTTGAATTAGGTGTTATTCCATCTGTAATTGATACAACAATTTATATTAATAATGGTGAAATAGATACA GTATATTCAATAGAATTAACAGTAAAAGTTCCAACAGGTATGCTTGAAGCTGACTTGTCACGACCTGTAATTGAAATAAA AGACTTTGAAAGTGGTGAATTATTCTATGAAATATATACATATGGTGAACAAACTATAGTGATGGATATTAATAAAACTC AAAGACAGGATGATGATAAAGAAGATCAAAAGAGTCCTGTTAGTAAAATTGTTGAAAGAGTTATAAGAAAAGAAGTAAAT AAGGTGGCTCCACATGCAATTATGGAAGTATCCTTGATATCAGATAAACGTGCACTTCTTGAAATTGATCCAGATCATAC TGGTGCTGTTATTGGTAAAAATGGAAGAACAATAGCACAAATTGAAGAACGTGCTGGTATTAGTATTGAAGTTGAAGAAT TAGAAGTAAAGGATATTGATAATAGATCACCTATAAATGTAAATGTTTCTGGTAATTATTTATCATTAAACTTTAGAAAA GAAGATATTGGTTCTAGCTATGATATTATAGTAGAAGATGAATATCTATTCACAGCAACAGTTGGTAAAAAGGCAAATAT TCGTCTTAAAAAAGATATTGAAATGGCAGAAATTGTTATTGAAGCCATGAAAAAAGGTGAACCAGTGTATGCTAGATTAA GAAATGAGGATTTATATTGA
Upstream 100 bases:
>100_bases TTTTTATAAGAAATTATCAGATGATGGAGAAGTTGTGACTGAATATGAAGATAAGGTATTTGACCCTGAAGATGTATATG AAAAATAAGGAGATGTTTTA
Downstream 100 bases:
>100_bases GGTTATTAAAATGAAAATTAGTGTTTCAACATTAGGATTATATCCTGCAACAATGGAAAATATTTTAGACTTTGTAACAG AACAAAAATTAGATTATCTT
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 619; Mature: 619
Protein sequence:
>619_residues MVKIVPDTSIIIDQQVSVLVQDLYKGAEVLIPEAVPSEIENHANKRKEIGYQGLEELKKLQQLSTEGIITLEYVGRRPKL DEISIAGGGEIDAMIRDIARKYHAILVTSDKLQKEIAEAQGVETYFYKKEVEPISTGPTELESYFSKDISSIHLRENTTP MAKKGTPGHIELIELDYVPLRYRDLDRISKEIIEQSKKRHDCFIEIDKRGATVIQFGDLRVTIAKPPFSDGFEITAIKPV NKLDLDDYDVSDKLLERLSNDAKGILIAGSPGAGKSTFAQALAEYYYYDMEQMVKTMESPRDLNLDDNITQYAPLEGDME NTADILLLVRPDFTIFDEVRKTRDFEIYSDMRLAGVGMIGVVHATRAIDAVQRFIGRLELGVIPSVIDTTIYINNGEIDT VYSIELTVKVPTGMLEADLSRPVIEIKDFESGELFYEIYTYGEQTIVMDINKTQRQDDDKEDQKSPVSKIVERVIRKEVN KVAPHAIMEVSLISDKRALLEIDPDHTGAVIGKNGRTIAQIEERAGISIEVEELEVKDIDNRSPINVNVSGNYLSLNFRK EDIGSSYDIIVEDEYLFTATVGKKANIRLKKDIEMAEIVIEAMKKGEPVYARLRNEDLY
Sequences:
>Translated_619_residues MVKIVPDTSIIIDQQVSVLVQDLYKGAEVLIPEAVPSEIENHANKRKEIGYQGLEELKKLQQLSTEGIITLEYVGRRPKL DEISIAGGGEIDAMIRDIARKYHAILVTSDKLQKEIAEAQGVETYFYKKEVEPISTGPTELESYFSKDISSIHLRENTTP MAKKGTPGHIELIELDYVPLRYRDLDRISKEIIEQSKKRHDCFIEIDKRGATVIQFGDLRVTIAKPPFSDGFEITAIKPV NKLDLDDYDVSDKLLERLSNDAKGILIAGSPGAGKSTFAQALAEYYYYDMEQMVKTMESPRDLNLDDNITQYAPLEGDME NTADILLLVRPDFTIFDEVRKTRDFEIYSDMRLAGVGMIGVVHATRAIDAVQRFIGRLELGVIPSVIDTTIYINNGEIDT VYSIELTVKVPTGMLEADLSRPVIEIKDFESGELFYEIYTYGEQTIVMDINKTQRQDDDKEDQKSPVSKIVERVIRKEVN KVAPHAIMEVSLISDKRALLEIDPDHTGAVIGKNGRTIAQIEERAGISIEVEELEVKDIDNRSPINVNVSGNYLSLNFRK EDIGSSYDIIVEDEYLFTATVGKKANIRLKKDIEMAEIVIEAMKKGEPVYARLRNEDLY >Mature_619_residues MVKIVPDTSIIIDQQVSVLVQDLYKGAEVLIPEAVPSEIENHANKRKEIGYQGLEELKKLQQLSTEGIITLEYVGRRPKL DEISIAGGGEIDAMIRDIARKYHAILVTSDKLQKEIAEAQGVETYFYKKEVEPISTGPTELESYFSKDISSIHLRENTTP MAKKGTPGHIELIELDYVPLRYRDLDRISKEIIEQSKKRHDCFIEIDKRGATVIQFGDLRVTIAKPPFSDGFEITAIKPV NKLDLDDYDVSDKLLERLSNDAKGILIAGSPGAGKSTFAQALAEYYYYDMEQMVKTMESPRDLNLDDNITQYAPLEGDME NTADILLLVRPDFTIFDEVRKTRDFEIYSDMRLAGVGMIGVVHATRAIDAVQRFIGRLELGVIPSVIDTTIYINNGEIDT VYSIELTVKVPTGMLEADLSRPVIEIKDFESGELFYEIYTYGEQTIVMDINKTQRQDDDKEDQKSPVSKIVERVIRKEVN KVAPHAIMEVSLISDKRALLEIDPDHTGAVIGKNGRTIAQIEERAGISIEVEELEVKDIDNRSPINVNVSGNYLSLNFRK EDIGSSYDIIVEDEYLFTATVGKKANIRLKKDIEMAEIVIEAMKKGEPVYARLRNEDLY
Specific function: Unknown
COG id: COG1855
COG function: function code R; ATPase (PilT family)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR004087 - InterPro: IPR009019 - InterPro: IPR004088 - InterPro: IPR018111 - InterPro: IPR002716 - InterPro: IPR006596 - InterPro: IPR001482 [H]
Pfam domain/function: PF00437 GSPII_E; PF00013 KH_1; PF01850 PIN [H]
EC number: NA
Molecular weight: Translated: 69859; Mature: 69859
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS50084 KH_TYPE_1 ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKIVPDTSIIIDQQVSVLVQDLYKGAEVLIPEAVPSEIENHANKRKEIGYQGLEELKKL CEEECCCCCEEEHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHH QQLSTEGIITLEYVGRRPKLDEISIAGGGEIDAMIRDIARKYHAILVTSDKLQKEIAEAQ HHHCCCCEEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHEEEEEECHHHHHHHHHHC GVETYFYKKEVEPISTGPTELESYFSKDISSIHLRENTTPMAKKGTPGHIELIELDYVPL CCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCC RYRDLDRISKEIIEQSKKRHDCFIEIDKRGATVIQFGDLRVTIAKPPFSDGFEITAIKPV CHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCEEEEEECCCCCCCEEEEEECCC NKLDLDDYDVSDKLLERLSNDAKGILIAGSPGAGKSTFAQALAEYYYYDMEQMVKTMESP CCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC RDLNLDDNITQYAPLEGDMENTADILLLVRPDFTIFDEVRKTRDFEIYSDMRLAGVGMIG CCCCCCCCCCEECCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCEECCCCHHH VVHATRAIDAVQRFIGRLELGVIPSVIDTTIYINNGEIDTVYSIELTVKVPTGMLEADLS HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEEEEEEECCCCHHHHHCC RPVIEIKDFESGELFYEIYTYGEQTIVMDINKTQRQDDDKEDQKSPVSKIVERVIRKEVN CCEEEEECCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH KVAPHAIMEVSLISDKRALLEIDPDHTGAVIGKNGRTIAQIEERAGISIEVEELEVKDID HHCCHHHEEEEEECCCCEEEEECCCCCCEEECCCCCEEEEEHHHCCCEEEEEEEEEECCC NRSPINVNVSGNYLSLNFRKEDIGSSYDIIVEDEYLFTATVGKKANIRLKKDIEMAEIVI CCCCEEEEECCCEEEEEEEHHHCCCCCEEEEECCEEEEEECCCCCCEEEECCCHHHHHHH EAMKKGEPVYARLRNEDLY HHHHCCCCEEEEECCCCCC >Mature Secondary Structure MVKIVPDTSIIIDQQVSVLVQDLYKGAEVLIPEAVPSEIENHANKRKEIGYQGLEELKKL CEEECCCCCEEEHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHH QQLSTEGIITLEYVGRRPKLDEISIAGGGEIDAMIRDIARKYHAILVTSDKLQKEIAEAQ HHHCCCCEEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHEEEEEECHHHHHHHHHHC GVETYFYKKEVEPISTGPTELESYFSKDISSIHLRENTTPMAKKGTPGHIELIELDYVPL CCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCC RYRDLDRISKEIIEQSKKRHDCFIEIDKRGATVIQFGDLRVTIAKPPFSDGFEITAIKPV CHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCEEEEEECCCCCCCEEEEEECCC NKLDLDDYDVSDKLLERLSNDAKGILIAGSPGAGKSTFAQALAEYYYYDMEQMVKTMESP CCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC RDLNLDDNITQYAPLEGDMENTADILLLVRPDFTIFDEVRKTRDFEIYSDMRLAGVGMIG CCCCCCCCCCEECCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCEECCCCHHH VVHATRAIDAVQRFIGRLELGVIPSVIDTTIYINNGEIDTVYSIELTVKVPTGMLEADLS HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEEEEEEECCCCHHHHHCC RPVIEIKDFESGELFYEIYTYGEQTIVMDINKTQRQDDDKEDQKSPVSKIVERVIRKEVN CCEEEEECCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH KVAPHAIMEVSLISDKRALLEIDPDHTGAVIGKNGRTIAQIEERAGISIEVEELEVKDID HHCCHHHEEEEEECCCCEEEEECCCCCCEEECCCCCEEEEEHHHCCCEEEEEEEEEECCC NRSPINVNVSGNYLSLNFRKEDIGSSYDIIVEDEYLFTATVGKKANIRLKKDIEMAEIVI CCCCEEEEECCCEEEEEEEHHHCCCCCEEEEECCEEEEEECCCCCCEEEECCCHHHHHHH EAMKKGEPVYARLRNEDLY HHHHCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]