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The map label for this gene is yibD [C]

Identifier: 84489454

GI number: 84489454

Start: 753753

End: 755525

Strand: Direct

Name: yibD [C]

Synonym: Msp_0645

Alternate gene names: 84489454

Gene position: 753753-755525 (Clockwise)

Preceding gene: 84489453

Following gene: 84489455

Centisome position: 42.65

GC content: 26.79

Gene sequence:

>1773_bases
ATGAAGATTAGTATTATCATACCCACATATAATGAAGAGGAATTTCTTCCTGATTTATTAAAAAGTATTAAAAGACAAGA
TTTTAAGGATTTAGAAGTTATTATAGCTGATGCTAATTCCACAGATAAAACAGTTGAAATTGCTAAATCATACATGTGTA
AAGTTGTACCTGGTGGTCTTCCAGCTGTTGGACGTAATAATGGTGCAAAAGTAGCTAAGGGTGAAATATTATTATTTTTA
GATGCTGATTCAGTATTAACTAATAATTATATAACATCTACTATTGAAGAATTTGAATTACATAATTTAGGTATTGCTAT
TACTCAAATTGTTCCATTGGAGAAGGGTTTTATCAATGAAATATCTCATGAAATAGCTAACTATCTAACCAAACAAATAT
CTCATATAAAACCACATGGTGCTGGTTGTTATGGTATGATTACATATAAATCATTACATGAGAAAGTCAATGGTTTTGAT
GAATCATTAGATTTTGGTGAAGATACAGATTATATTGAAAGAATTGCTAAAATAAGTCGTTTTAAAGTTCTTGAAAATCC
ACGTTTACTAATTTCTACTAGAAGATTAGAAGAGGAAGGATTAAAGGAAATTACATTAAAGTATGCAAAAAGTACTGCTA
AACAATTGGTTGGTCAAAAAGTGACATTAGAGGAGTTAGGTTATAGTTTTGGACATGGTAGTTCAAAGAAAAATAGAATT
CTTTACTCATTATGTGGTGAAGGATTAGGTCATGCAATTCGTAGTGGGGTAGTTATTGAATATTTAATTAATGAAGGTTA
TGATTTAATTGTATTTGCAAGTGATAGGGCTTATGATTATTTAAATTCTAAATTTGATAATATATATTATATTGGTGGAT
TCAATACTGTTTATGAAAATAACTCTGTTCGTAATAGAAAAACATTTGTATATAATATGAAGGATGTGCCTAGTGATTTA
AAAAATAATATGACTAAAATGTTTAATTTAGCTCATAAATTTAAGCCTGATGTTATAGTATCTGATTTTGAATTCTATTC
AAATTTATTATCACATATACTTCGTATACCCTTAATTAGTATTGATAATATGCATGTATTAACAGAGGCCAAGTATTCAA
CACCAAATAAATATGCAAAGGACAGATTATTTAGTGAATCAGTGGTTCATGCTTTTATTCAAAATGCTAAGAAAACATTA
ATATATTCATATTTCTTCCCACCACTTAAAAATACAGAAAACACAAGATATGTTTATCCAATACTCAGGGATAAAATATA
TCAACTTAAGCCTACAGATGGAGATTATATACTAGTATATCAGACAAGTACATCAAACAATGAATTAATAGAACTATTAA
AGAAAAATCCACAACAAAACTTCATTGTATATGGCTTTCATGTGGATAAAAAAGAGGATAATGTATTATTTAGATCATTT
AGTGAAGATTTATTATATAAGGATTTTAAAGATGCAAAATGTGTAATAACAAATGGTGGATTTTCATTTATTACAGAAGC
ACTTCAATTAGGAAAACCAATACTAAGTATACCTGTAAAGAAACAATTTGAACAAATACTAAATGCAATTTATCTGGATA
AATTAGGTTATGGAGAACATCATAGTAAGATTAACCAGGCAATTCTAGATAATTTCATAGAAAAAATACCTGTATATAAG
AAAAATATTTCTGAAAAATATGTAAAACCTAAAAATAACAATGAAACATTGAATATACTAAAGGAAACTATTGAAGAAGT
AATAAATAACTAA

Upstream 100 bases:

>100_bases
TAATCATAATTATAATATTATATAACATACAAAAATAATATTACATTTTTTTAAATTTAATGATTTTTTTATAAAAATTC
TATAATAAAATTGTGATTTC

Downstream 100 bases:

>100_bases
AATCCTTTTCTATTTTTTTTTGATAATATGAATTATATAACTGCTAAAACTATTCTTACACCAGTAAATTACTCCTCAAA
ATGGTTTGGAATAGATTATA

Product: glycosyltransferase

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; Teichoic Acid Biosynthesis Related Protein; Glycosyl Transferase; Glycosyltransferase Involved In Cell Wall Biogenesis; Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase GT2 Family; Glycosyl Transferase Family 2 Protein; Glycosyltransferase Family; UDP-Glucuronosyltransferase; Glycosyltransferase-Distantly-Related Protein; Cell Wall Biosynthesis Glycosyltransferase; Glucosyltransferase; UDP- Glucuronosyltransferase-Like Glycosyl Transferase; Glycoside Hydrolase Family 2 Protein; Family Glycosyltransferase; Hyaluronan Synthase ; UDP-Glucuronosyltransferase-Like Protein; Ss-1 4-Galactosyltransferase; Glycosyl Transferase Gt1A; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Beta-1 3-Galactosyltransferase; Beta-1 3-N-Acetylglucosaminyltransferase; Rhamnosyl Transferase; Glycosyl Transferase Group 2 Family; Glucosaminyltransferase; Family 2 Glycosyl Transferase

Number of amino acids: Translated: 590; Mature: 590

Protein sequence:

>590_residues
MKISIIIPTYNEEEFLPDLLKSIKRQDFKDLEVIIADANSTDKTVEIAKSYMCKVVPGGLPAVGRNNGAKVAKGEILLFL
DADSVLTNNYITSTIEEFELHNLGIAITQIVPLEKGFINEISHEIANYLTKQISHIKPHGAGCYGMITYKSLHEKVNGFD
ESLDFGEDTDYIERIAKISRFKVLENPRLLISTRRLEEEGLKEITLKYAKSTAKQLVGQKVTLEELGYSFGHGSSKKNRI
LYSLCGEGLGHAIRSGVVIEYLINEGYDLIVFASDRAYDYLNSKFDNIYYIGGFNTVYENNSVRNRKTFVYNMKDVPSDL
KNNMTKMFNLAHKFKPDVIVSDFEFYSNLLSHILRIPLISIDNMHVLTEAKYSTPNKYAKDRLFSESVVHAFIQNAKKTL
IYSYFFPPLKNTENTRYVYPILRDKIYQLKPTDGDYILVYQTSTSNNELIELLKKNPQQNFIVYGFHVDKKEDNVLFRSF
SEDLLYKDFKDAKCVITNGGFSFITEALQLGKPILSIPVKKQFEQILNAIYLDKLGYGEHHSKINQAILDNFIEKIPVYK
KNISEKYVKPKNNNETLNILKETIEEVINN

Sequences:

>Translated_590_residues
MKISIIIPTYNEEEFLPDLLKSIKRQDFKDLEVIIADANSTDKTVEIAKSYMCKVVPGGLPAVGRNNGAKVAKGEILLFL
DADSVLTNNYITSTIEEFELHNLGIAITQIVPLEKGFINEISHEIANYLTKQISHIKPHGAGCYGMITYKSLHEKVNGFD
ESLDFGEDTDYIERIAKISRFKVLENPRLLISTRRLEEEGLKEITLKYAKSTAKQLVGQKVTLEELGYSFGHGSSKKNRI
LYSLCGEGLGHAIRSGVVIEYLINEGYDLIVFASDRAYDYLNSKFDNIYYIGGFNTVYENNSVRNRKTFVYNMKDVPSDL
KNNMTKMFNLAHKFKPDVIVSDFEFYSNLLSHILRIPLISIDNMHVLTEAKYSTPNKYAKDRLFSESVVHAFIQNAKKTL
IYSYFFPPLKNTENTRYVYPILRDKIYQLKPTDGDYILVYQTSTSNNELIELLKKNPQQNFIVYGFHVDKKEDNVLFRSF
SEDLLYKDFKDAKCVITNGGFSFITEALQLGKPILSIPVKKQFEQILNAIYLDKLGYGEHHSKINQAILDNFIEKIPVYK
KNISEKYVKPKNNNETLNILKETIEEVINN
>Mature_590_residues
MKISIIIPTYNEEEFLPDLLKSIKRQDFKDLEVIIADANSTDKTVEIAKSYMCKVVPGGLPAVGRNNGAKVAKGEILLFL
DADSVLTNNYITSTIEEFELHNLGIAITQIVPLEKGFINEISHEIANYLTKQISHIKPHGAGCYGMITYKSLHEKVNGFD
ESLDFGEDTDYIERIAKISRFKVLENPRLLISTRRLEEEGLKEITLKYAKSTAKQLVGQKVTLEELGYSFGHGSSKKNRI
LYSLCGEGLGHAIRSGVVIEYLINEGYDLIVFASDRAYDYLNSKFDNIYYIGGFNTVYENNSVRNRKTFVYNMKDVPSDL
KNNMTKMFNLAHKFKPDVIVSDFEFYSNLLSHILRIPLISIDNMHVLTEAKYSTPNKYAKDRLFSESVVHAFIQNAKKTL
IYSYFFPPLKNTENTRYVYPILRDKIYQLKPTDGDYILVYQTSTSNNELIELLKKNPQQNFIVYGFHVDKKEDNVLFRSF
SEDLLYKDFKDAKCVITNGGFSFITEALQLGKPILSIPVKKQFEQILNAIYLDKLGYGEHHSKINQAILDNFIEKIPVYK
KNISEKYVKPKNNNETLNILKETIEEVINN

Specific function: Unknown

COG id: COG1819

COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 67597; Mature: 67597

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISIIIPTYNEEEFLPDLLKSIKRQDFKDLEVIIADANSTDKTVEIAKSYMCKVVPGGL
CEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHEECCCCC
PAVGRNNGAKVAKGEILLFLDADSVLTNNYITSTIEEFELHNLGIAITQIVPLEKGFINE
CCCCCCCCCEEECCCEEEEEECCHHHHCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHH
ISHEIANYLTKQISHIKPHGAGCYGMITYKSLHEKVNGFDESLDFGEDTDYIERIAKISR
HHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHH
FKVLENPRLLISTRRLEEEGLKEITLKYAKSTAKQLVGQKVTLEELGYSFGHGSSKKNRI
HHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCC
LYSLCGEGLGHAIRSGVVIEYLINEGYDLIVFASDRAYDYLNSKFDNIYYIGGFNTVYEN
HHHHHCCHHHHHHHCCEEEEEECCCCCEEEEEECCCHHHHHHCCCCCEEEECCCCEEECC
NSVRNRKTFVYNMKDVPSDLKNNMTKMFNLAHKFKPDVIVSDFEFYSNLLSHILRIPLIS
CCCCCCEEEEEECHHCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCEE
IDNMHVLTEAKYSTPNKYAKDRLFSESVVHAFIQNAKKTLIYSYFFPPLKNTENTRYVYP
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCEEEEE
ILRDKIYQLKPTDGDYILVYQTSTSNNELIELLKKNPQQNFIVYGFHVDKKEDNVLFRSF
EHHCCEEEECCCCCCEEEEEEECCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHH
SEDLLYKDFKDAKCVITNGGFSFITEALQLGKPILSIPVKKQFEQILNAIYLDKLGYGEH
HHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHCCCCHH
HSKINQAILDNFIEKIPVYKKNISEKYVKPKNNNETLNILKETIEEVINN
HHHHHHHHHHHHHHHCCCHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKISIIIPTYNEEEFLPDLLKSIKRQDFKDLEVIIADANSTDKTVEIAKSYMCKVVPGGL
CEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHEECCCCC
PAVGRNNGAKVAKGEILLFLDADSVLTNNYITSTIEEFELHNLGIAITQIVPLEKGFINE
CCCCCCCCCEEECCCEEEEEECCHHHHCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHH
ISHEIANYLTKQISHIKPHGAGCYGMITYKSLHEKVNGFDESLDFGEDTDYIERIAKISR
HHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHH
FKVLENPRLLISTRRLEEEGLKEITLKYAKSTAKQLVGQKVTLEELGYSFGHGSSKKNRI
HHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCC
LYSLCGEGLGHAIRSGVVIEYLINEGYDLIVFASDRAYDYLNSKFDNIYYIGGFNTVYEN
HHHHHCCHHHHHHHCCEEEEEECCCCCEEEEEECCCHHHHHHCCCCCEEEECCCCEEECC
NSVRNRKTFVYNMKDVPSDLKNNMTKMFNLAHKFKPDVIVSDFEFYSNLLSHILRIPLIS
CCCCCCEEEEEECHHCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCEE
IDNMHVLTEAKYSTPNKYAKDRLFSESVVHAFIQNAKKTLIYSYFFPPLKNTENTRYVYP
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCEEEEE
ILRDKIYQLKPTDGDYILVYQTSTSNNELIELLKKNPQQNFIVYGFHVDKKEDNVLFRSF
EHHCCEEEECCCCCCEEEEEEECCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHH
SEDLLYKDFKDAKCVITNGGFSFITEALQLGKPILSIPVKKQFEQILNAIYLDKLGYGEH
HHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHCCCCHH
HSKINQAILDNFIEKIPVYKKNISEKYVKPKNNNETLNILKETIEEVINN
HHHHHHHHHHHHHHHCCCHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA