Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84489372

Identifier: 84489372

GI number: 84489372

Start: 653784

End: 654014

Strand: Direct

Name: 84489372

Synonym: Msp_0562

Alternate gene names: NA

Gene position: 653784-654014 (Clockwise)

Preceding gene: 84489371

Following gene: 84489375

Centisome position: 36.99

GC content: 22.51

Gene sequence:

>231_bases
TTGTTGGATAATATACATAAACTTGTTAAAACAAATAAATTAGAAGAAGTGACTGTTAATATATTAAATAAAAATAAAAC
AGAAGGTAGGTTACTGTTTTATGTTAATAAACAAGCTGCTTTTCATAATAAATTTCATATTATAGATGAAAACATGTCTC
CATTAGATGATATTGAGGTATTAATAGAAACTAGTAATCCAGATAGTATAATAAAATGGATTACATCTTAA

Upstream 100 bases:

>100_bases
AGATATAAACAAGGTAAAAAACAGTATAAAAAACATAATCCCCGAAAAAATAACAATAAACACCACAGACAAGGAAATAC
TCATTGAAAGTGATGTTACT

Downstream 100 bases:

>100_bases
ACTCTTTTTTTTAGATAATTATTTAAATACTATAATCATATTTTTCTTCAAGATGTGCTTTTTTAATGTTATATATTCCA
TTATCAACATTCCAAAGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MLDNIHKLVKTNKLEEVTVNILNKNKTEGRLLFYVNKQAAFHNKFHIIDENMSPLDDIEVLIETSNPDSIIKWITS

Sequences:

>Translated_76_residues
MLDNIHKLVKTNKLEEVTVNILNKNKTEGRLLFYVNKQAAFHNKFHIIDENMSPLDDIEVLIETSNPDSIIKWITS
>Mature_76_residues
MLDNIHKLVKTNKLEEVTVNILNKNKTEGRLLFYVNKQAAFHNKFHIIDENMSPLDDIEVLIETSNPDSIIKWITS

Specific function: Unknown

COG id: COG1931

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8836; Mature: 8836

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDNIHKLVKTNKLEEVTVNILNKNKTEGRLLFYVNKQAAFHNKFHIIDENMSPLDDIEV
CCCHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCEEE
LIETSNPDSIIKWITS
EEECCCCCHHHHEECC
>Mature Secondary Structure
MLDNIHKLVKTNKLEEVTVNILNKNKTEGRLLFYVNKQAAFHNKFHIIDENMSPLDDIEV
CCCHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCEEE
LIETSNPDSIIKWITS
EEECCCCCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA