Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489294
Identifier: 84489294
GI number: 84489294
Start: 566762
End: 567250
Strand: Direct
Name: 84489294
Synonym: Msp_0483
Alternate gene names: NA
Gene position: 566762-567250 (Clockwise)
Preceding gene: 84489293
Following gene: 84489305
Centisome position: 32.07
GC content: 22.9
Gene sequence:
>489_bases TTGGGTAATTGTGTAATTTTCTTAGATGAAAAAAGAATTCCTTTGAATCAACAAATACGAAGTCAAATGTTATCTAAATA CCCATATTATGGTGCTGCAGGAATCATTGATTATGTGAATAATTATATTTTTGATGATGAATTAATATTATTAGGTGAAG ATGGTTCTATTATTCCCACATTAGCTTCAGGAAAATGTTGGGTTAGTAATCATGCACATGTACTTAAAAATAAAAAAAAT ATCAATTTATATTTCTTATATAATATTTTATCTAAAATTCATTTTGAAAAATACAATACTGGTACTATCCAACCAAAATT AAACAAAAAAACGGCAAAAAACATCAAAATTAAAATAACTTCCAAAAAAGAACAAGAAAAAATTGTTGATTTTATGTTAT CAATAGGAACAAAAATAAAAAAAATTCAAAAACAGATAAAATTTCTAAAAACGTTCAAAAAAGGATTATTACAGAAAATG TTTTGTTAA
Upstream 100 bases:
>100_bases TATAAAGAAATATTATTTAGAAAATCTATTTCCAAAAGAAAATGAAACTATACCTAATCTACGGTTTTTAGAATTTAACA ATGATTGGATAAAAACTACA
Downstream 100 bases:
>100_bases ACAAACATCTTTTGAAGTAAATCCTTTTTATATCTTTTTTCATAATTTATTTTCTTACTTAAATATTCTAATTTAATATC AATATTAGATAATATATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: S protein [H]
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MGNCVIFLDEKRIPLNQQIRSQMLSKYPYYGAAGIIDYVNNYIFDDELILLGEDGSIIPTLASGKCWVSNHAHVLKNKKN INLYFLYNILSKIHFEKYNTGTIQPKLNKKTAKNIKIKITSKKEQEKIVDFMLSIGTKIKKIQKQIKFLKTFKKGLLQKM FC
Sequences:
>Translated_162_residues MGNCVIFLDEKRIPLNQQIRSQMLSKYPYYGAAGIIDYVNNYIFDDELILLGEDGSIIPTLASGKCWVSNHAHVLKNKKN INLYFLYNILSKIHFEKYNTGTIQPKLNKKTAKNIKIKITSKKEQEKIVDFMLSIGTKIKKIQKQIKFLKTFKKGLLQKM FC >Mature_161_residues GNCVIFLDEKRIPLNQQIRSQMLSKYPYYGAAGIIDYVNNYIFDDELILLGEDGSIIPTLASGKCWVSNHAHVLKNKKNI NLYFLYNILSKIHFEKYNTGTIQPKLNKKTAKNIKIKITSKKEQEKIVDFMLSIGTKIKKIQKQIKFLKTFKKGLLQKMF C
Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. Subunit S dictates DNA sequences specificity [H]
COG id: COG0732
COG function: function code V; Restriction endonuclease S subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type-I restriction system S methylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000055 [H]
Pfam domain/function: PF01420 Methylase_S [H]
EC number: NA
Molecular weight: Translated: 18782; Mature: 18650
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNCVIFLDEKRIPLNQQIRSQMLSKYPYYGAAGIIDYVNNYIFDDELILLGEDGSIIPT CCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCEEEECCCCCEEEE LASGKCWVSNHAHVLKNKKNINLYFLYNILSKIHFEKYNTGTIQPKLNKKTAKNIKIKIT ECCCEEEECCCHHHHCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEE SKKEQEKIVDFMLSIGTKIKKIQKQIKFLKTFKKGLLQKMFC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GNCVIFLDEKRIPLNQQIRSQMLSKYPYYGAAGIIDYVNNYIFDDELILLGEDGSIIPT CCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCEEEECCCCCEEEE LASGKCWVSNHAHVLKNKKNINLYFLYNILSKIHFEKYNTGTIQPKLNKKTAKNIKIKIT ECCCEEEECCCHHHHCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEE SKKEQEKIVDFMLSIGTKIKKIQKQIKFLKTFKKGLLQKMFC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]