Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is mod [H]

Identifier: 84489283

GI number: 84489283

Start: 553904

End: 554671

Strand: Direct

Name: mod [H]

Synonym: Msp_0472

Alternate gene names: 84489283

Gene position: 553904-554671 (Clockwise)

Preceding gene: 84489282

Following gene: 84489284

Centisome position: 31.34

GC content: 26.17

Gene sequence:

>768_bases
ATGGTTACGGATACTAATTATTCACTAAATCCAAATTATCCAAAATCTAGAAAAATTTTTTATCCTGGAGTAAAAATGTC
AACTTCAAAACCAGAACAAAATATAATATTAGATTTCTTTTCAGGTTCTGCAACAACAGCAGAAGCTGTGATGGATTTAA
ATCTTCAAAATAATTTAAATAATAAATTTATCATGATTCAATATCGTGAAAAAACAGATGAAAAATCTGAAGCCTACAAA
CAAGGTTATAATACAATTTGTGAAATAGGTGAAGAACGTATACGTCGAGCTGGTGATAAATTGTTAGATGAACATCCAGA
TAGTAATATAGATATTGGTTTTAAAGTTCTGAAATTAGACACCTCAAATTTTAAAGAATGGGATCCTAGTGATAGTCCTT
TAGAAGAATATCTTGATGATAGTGTGATTAATGTAAAAGAAGATAGAACTGATTTAGATTTTATTTATGAAATCATGATA
AAATATGGAATTGAATTAACATCACCTATAGAAGAAATTAAAAAATCTAATTATACATTCTATTCTGTTGGTTATGGAGC
ATTAATAGTTTGTTTAGATGATAAAGTAAATGAAGACGTAACTGAGGAAATAATTGAAATAATAAATGAAATAGAAATAG
TCGATGAAAATAAGAAACACAAGAATAGGGTTGTATTTAAAGATATTAGTTTCTTAGATGATTCTGTAAAAACTAACATT
ATCCAAGTACTAGAAAACAACAACATTGAAGACTTTATTACTTATTAA

Upstream 100 bases:

>100_bases
AAATTTAAAAATACAAAAGAAAAATAAATATTCAAAAATCAAGACCCGACAACTGGAAAGCCACCCTAAACCAAAAGAAT
TAATTAAACATTTAATTAAC

Downstream 100 bases:

>100_bases
GTTGGTGATTGTTCATGGAATTAAATTTTGAATCAAATTTGGAATACCAACAAGATGCTATTGGTTCTATTGTAGATTTG
TTTAATGGCCAAGCTTCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: M.EcoP15I; EcoP15I methyltransferase [H]

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MVTDTNYSLNPNYPKSRKIFYPGVKMSTSKPEQNIILDFFSGSATTAEAVMDLNLQNNLNNKFIMIQYREKTDEKSEAYK
QGYNTICEIGEERIRRAGDKLLDEHPDSNIDIGFKVLKLDTSNFKEWDPSDSPLEEYLDDSVINVKEDRTDLDFIYEIMI
KYGIELTSPIEEIKKSNYTFYSVGYGALIVCLDDKVNEDVTEEIIEIINEIEIVDENKKHKNRVVFKDISFLDDSVKTNI
IQVLENNNIEDFITY

Sequences:

>Translated_255_residues
MVTDTNYSLNPNYPKSRKIFYPGVKMSTSKPEQNIILDFFSGSATTAEAVMDLNLQNNLNNKFIMIQYREKTDEKSEAYK
QGYNTICEIGEERIRRAGDKLLDEHPDSNIDIGFKVLKLDTSNFKEWDPSDSPLEEYLDDSVINVKEDRTDLDFIYEIMI
KYGIELTSPIEEIKKSNYTFYSVGYGALIVCLDDKVNEDVTEEIIEIINEIEIVDENKKHKNRVVFKDISFLDDSVKTNI
IQVLENNNIEDFITY
>Mature_255_residues
MVTDTNYSLNPNYPKSRKIFYPGVKMSTSKPEQNIILDFFSGSATTAEAVMDLNLQNNLNNKFIMIQYREKTDEKSEAYK
QGYNTICEIGEERIRRAGDKLLDEHPDSNIDIGFKVLKLDTSNFKEWDPSDSPLEEYLDDSVINVKEDRTDLDFIYEIMI
KYGIELTSPIEEIKKSNYTFYSVGYGALIVCLDDKVNEDVTEEIIEIINEIEIVDENKKHKNRVVFKDISFLDDSVKTNI
IQVLENNNIEDFITY

Specific function: Binds the system-specific DNA recognition site 5'- CAGCAC-3'. Necessary for both restriction and methylation (of one of the two A's) [H]

COG id: COG2189

COG function: function code L; Adenine specific DNA methylase Mod

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002295
- InterPro:   IPR002941
- InterPro:   IPR002052 [H]

Pfam domain/function: PF01555 N6_N4_Mtase [H]

EC number: =2.1.1.72 [H]

Molecular weight: Translated: 29569; Mature: 29569

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTDTNYSLNPNYPKSRKIFYPGVKMSTSKPEQNIILDFFSGSATTAEAVMDLNLQNNLN
CCCCCCCCCCCCCCCCCEEEECCEECCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCC
NKFIMIQYREKTDEKSEAYKQGYNTICEIGEERIRRAGDKLLDEHPDSNIDIGFKVLKLD
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
TSNFKEWDPSDSPLEEYLDDSVINVKEDRTDLDFIYEIMIKYGIELTSPIEEIKKSNYTF
CCCCCCCCCCCCHHHHHCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCEE
YSVGYGALIVCLDDKVNEDVTEEIIEIINEIEIVDENKKHKNRVVFKDISFLDDSVKTNI
EEECCCEEEEEECCCCCHHHHHHHHHHHHHHEECCCCCCCCCEEEEEHHHHHHHHHHHHH
IQVLENNNIEDFITY
HHHHHCCCHHHHCCC
>Mature Secondary Structure
MVTDTNYSLNPNYPKSRKIFYPGVKMSTSKPEQNIILDFFSGSATTAEAVMDLNLQNNLN
CCCCCCCCCCCCCCCCCEEEECCEECCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCC
NKFIMIQYREKTDEKSEAYKQGYNTICEIGEERIRRAGDKLLDEHPDSNIDIGFKVLKLD
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
TSNFKEWDPSDSPLEEYLDDSVINVKEDRTDLDFIYEIMIKYGIELTSPIEEIKKSNYTF
CCCCCCCCCCCCHHHHHCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCEE
YSVGYGALIVCLDDKVNEDVTEEIIEIINEIEIVDENKKHKNRVVFKDISFLDDSVKTNI
EEECCCEEEEEECCCCCHHHHHHHHHHHHHHEECCCCCCCCCEEEEEHHHHHHHHHHHHH
IQVLENNNIEDFITY
HHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2837577 [H]