Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489267
Identifier: 84489267
GI number: 84489267
Start: 535462
End: 536259
Strand: Direct
Name: 84489267
Synonym: Msp_0456
Alternate gene names: NA
Gene position: 535462-536259 (Clockwise)
Preceding gene: 84489266
Following gene: 84489268
Centisome position: 30.3
GC content: 34.59
Gene sequence:
>798_bases ATGGACTCAACCACAAGAGCAAAAGCAACAACCAATGGAGAAGTAACAATTACAATAGATGGTAAAGCAGTAACAACAGT AAAGACCAGTAAAGGAGTCTTCAGATATACATTTAACAACACTCTTACAGAAGGAAAACATAACCTCACATATACCTATA AAGGCGACACAGTATACGCTAACAGTACCAGGACACTAAACCTTACATCCAACAAGAACACTCTTAGAATATCAGCACCA ACAATAAATGCAAGCATAGGAGACACAATAAAAATAACAGCCACAGTAACAAACACCAGTGGAGCAACAGTAAAAGACAA CCTCAAAGCAAATATACTGCTAAACGGTAAAACAATAGCCACGAATATAGATGTAACCTATGGAAAACTAACATACAACT ACACTATACCAACAGGAACAAGCTACAGCAACAAAATAACAGTAATAATACAGGAAACAGACACTTACAAAACAAGAAAC GCGAGTACAACACTGACAGTTAAGAAAGCATACCAGTATGTTAATGTAGTAACAAGCACTATAACAACTACCAGTGGATC CAAGATATACATCACAGGTAACATAACAGACAAAAACAAGAACCTGATAGCAGGAACAAAACTAAACATAAAAATAGGTG GAGTAGATATAGCTAACATCACTAGTACCAATGGTAAATTCAACTATGAATACACAGTAACACAGACAAAAGGAACATAT AATATACTGTTAACTGCCTTGGCTAGTGATAGTTACTATAATAATTCTAAATATATGAGTTTGAAAGTAACAACATAA
Upstream 100 bases:
>100_bases AAGACAGTAAAACATAACACTAAACAACAGACGAACATATATATCAGCAAGCAACACTCTTGGATACATTGGAAAAACCG TAACATTAAATGGAACAGTA
Downstream 100 bases:
>100_bases ACTGTTATTTTCTCTTTTTTTCTTTTTATTATTTCAGAAATTAATCATCTTTCTCCCATAGTTTTGGAGTGTCTCCTGAA ATTTTAGCCTGTTTTATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MDSTTRAKATTNGEVTITIDGKAVTTVKTSKGVFRYTFNNTLTEGKHNLTYTYKGDTVYANSTRTLNLTSNKNTLRISAP TINASIGDTIKITATVTNTSGATVKDNLKANILLNGKTIATNIDVTYGKLTYNYTIPTGTSYSNKITVIIQETDTYKTRN ASTTLTVKKAYQYVNVVTSTITTTSGSKIYITGNITDKNKNLIAGTKLNIKIGGVDIANITSTNGKFNYEYTVTQTKGTY NILLTALASDSYYNNSKYMSLKVTT
Sequences:
>Translated_265_residues MDSTTRAKATTNGEVTITIDGKAVTTVKTSKGVFRYTFNNTLTEGKHNLTYTYKGDTVYANSTRTLNLTSNKNTLRISAP TINASIGDTIKITATVTNTSGATVKDNLKANILLNGKTIATNIDVTYGKLTYNYTIPTGTSYSNKITVIIQETDTYKTRN ASTTLTVKKAYQYVNVVTSTITTTSGSKIYITGNITDKNKNLIAGTKLNIKIGGVDIANITSTNGKFNYEYTVTQTKGTY NILLTALASDSYYNNSKYMSLKVTT >Mature_265_residues MDSTTRAKATTNGEVTITIDGKAVTTVKTSKGVFRYTFNNTLTEGKHNLTYTYKGDTVYANSTRTLNLTSNKNTLRISAP TINASIGDTIKITATVTNTSGATVKDNLKANILLNGKTIATNIDVTYGKLTYNYTIPTGTSYSNKITVIIQETDTYKTRN ASTTLTVKKAYQYVNVVTSTITTTSGSKIYITGNITDKNKNLIAGTKLNIKIGGVDIANITSTNGKFNYEYTVTQTKGTY NILLTALASDSYYNNSKYMSLKVTT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28773; Mature: 28773
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSTTRAKATTNGEVTITIDGKAVTTVKTSKGVFRYTFNNTLTEGKHNLTYTYKGDTVYA CCCCCCEEEECCCEEEEEECCCEEEEEEECCCEEEEEECCCCCCCCCEEEEEECCCEEEE NSTRTLNLTSNKNTLRISAPTINASIGDTIKITATVTNTSGATVKDNLKANILLNGKTIA CCEEEEEEECCCCEEEEECCEEECCCCCEEEEEEEEECCCCCEEECCCEEEEEECCCEEE TNIDVTYGKLTYNYTIPTGTSYSNKITVIIQETDTYKTRNASTTLTVKKAYQYVNVVTST EEEEEEEEEEEEEEECCCCCCCCCEEEEEEEECCCEEECCCCEEEEEHHHHEEEEEEEEE ITTTSGSKIYITGNITDKNKNLIAGTKLNIKIGGVDIANITSTNGKFNYEYTVTQTKGTY EEECCCCEEEEEEEEECCCCCEEEEEEEEEEECCEEEEEEECCCCEEEEEEEEEECCCCE NILLTALASDSYYNNSKYMSLKVTT EEEEEEEECCCEECCCEEEEEEEEC >Mature Secondary Structure MDSTTRAKATTNGEVTITIDGKAVTTVKTSKGVFRYTFNNTLTEGKHNLTYTYKGDTVYA CCCCCCEEEECCCEEEEEECCCEEEEEEECCCEEEEEECCCCCCCCCEEEEEECCCEEEE NSTRTLNLTSNKNTLRISAPTINASIGDTIKITATVTNTSGATVKDNLKANILLNGKTIA CCEEEEEEECCCCEEEEECCEEECCCCCEEEEEEEEECCCCCEEECCCEEEEEECCCEEE TNIDVTYGKLTYNYTIPTGTSYSNKITVIIQETDTYKTRNASTTLTVKKAYQYVNVVTST EEEEEEEEEEEEEEECCCCCCCCCEEEEEEEECCCEEECCCCEEEEEHHHHEEEEEEEEE ITTTSGSKIYITGNITDKNKNLIAGTKLNIKIGGVDIANITSTNGKFNYEYTVTQTKGTY EEECCCCEEEEEEEEECCCCCEEEEEEEEEEECCEEEEEEECCCCEEEEEEEEEECCCCE NILLTALASDSYYNNSKYMSLKVTT EEEEEEEECCCEECCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA