Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84489248

Identifier: 84489248

GI number: 84489248

Start: 510582

End: 511640

Strand: Direct

Name: 84489248

Synonym: Msp_0437

Alternate gene names: NA

Gene position: 510582-511640 (Clockwise)

Preceding gene: 84489244

Following gene: 84489251

Centisome position: 28.89

GC content: 27.38

Gene sequence:

>1059_bases
ATGTCTGGATTTTATTCTGAAAAAATTTTTACCAATGAATTATTTGATGTATTTAAACAGGATGCTGCAATTGTTGTTTA
TCTAAAAAAGGAAAATAACTTGATTATTTCATCATGGATTAATGGAGGTTATCAAGAAAATTTGAAATATATTGTTAATC
AAACATTAGATGGTACAGATTATGATGAAATGGTTTCAATGGATTATTCCACATTTCAAACAAGATGTATGGAAAAAATT
AATTTAAATCCAAATGAATCAGCAGGTATGGCAACATCTGCATGTATGGATAATTATGCAATAAGTGTATATGAATATAA
GGATTTAAAAGTAACTTCTATTGTAACAGCAGGTGCAGATAATAATGGAATTAAGGCGGGAGATCCTGCATCATTTTATG
AACATAATAATGAATATAATCTCGATGTTGGAACAATAAATATTATAACAATAATTGATGCAAATCTAGAACCAGGAACA
TTAATAACAGCATCAATAACAGCTACTGAAGCAAAAACTAGTGTACTTCAAGATTTAAAATTAGAAAGTCAGTTTTCAAC
ACATATAGCAACAGGTACTGGTACTGATGGAATTTGTGTTATTTCCAATAAATCTAGTGAGAATCATATTGAAAATGCAG
GTAAACACTCAAAGCTAGGTGAAATTATTGCAAAGTCAGTTCAAGAAGCAACAAGAAAAGCTCTCTATCTACAAACAGAA
ATGTGTATATCTTACCAGAAATCAGTACTTAACAGATTAAGTAGATTTAACATAGATTTTGATACATTCTACAATAAAAC
AGAAGGTATTACAAAGACAGATTATGCTATGAAATTCAATAATTTCAATAGTAATACAGAAAATATTGCATATATAAGTG
GAATTATTGATTTAATTGATGAGACTCAAACAAATCTACTAGAAATATGTGATGTAGTACATCCCATAAAAAATATTATT
AAATTATTTTTAGATGTGGAATATGATGTAGAATTTAATTCCATTGATGATGTACTAAACTATTTAATCGATGCAATAAA
CACACATCTTCTAAAATAA

Upstream 100 bases:

>100_bases
TAGTGGCAATCCTACGAGACTCTGGATCTTGTGACAGCGGTTCGACTCCGCTAAGGACTACTTTTTATTCTATTTTTAGG
TTGATTATGGAGTTTTATGT

Downstream 100 bases:

>100_bases
TCTTTTTTTTTAAAAAGAAAAGGTGGGTAATTATATGAGTATTATTGGTAGGTCCACATTTTTAAGTGTTGCTTCTGTAA
AACTACCAATTACTCTTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MSGFYSEKIFTNELFDVFKQDAAIVVYLKKENNLIISSWINGGYQENLKYIVNQTLDGTDYDEMVSMDYSTFQTRCMEKI
NLNPNESAGMATSACMDNYAISVYEYKDLKVTSIVTAGADNNGIKAGDPASFYEHNNEYNLDVGTINIITIIDANLEPGT
LITASITATEAKTSVLQDLKLESQFSTHIATGTGTDGICVISNKSSENHIENAGKHSKLGEIIAKSVQEATRKALYLQTE
MCISYQKSVLNRLSRFNIDFDTFYNKTEGITKTDYAMKFNNFNSNTENIAYISGIIDLIDETQTNLLEICDVVHPIKNII
KLFLDVEYDVEFNSIDDVLNYLIDAINTHLLK

Sequences:

>Translated_352_residues
MSGFYSEKIFTNELFDVFKQDAAIVVYLKKENNLIISSWINGGYQENLKYIVNQTLDGTDYDEMVSMDYSTFQTRCMEKI
NLNPNESAGMATSACMDNYAISVYEYKDLKVTSIVTAGADNNGIKAGDPASFYEHNNEYNLDVGTINIITIIDANLEPGT
LITASITATEAKTSVLQDLKLESQFSTHIATGTGTDGICVISNKSSENHIENAGKHSKLGEIIAKSVQEATRKALYLQTE
MCISYQKSVLNRLSRFNIDFDTFYNKTEGITKTDYAMKFNNFNSNTENIAYISGIIDLIDETQTNLLEICDVVHPIKNII
KLFLDVEYDVEFNSIDDVLNYLIDAINTHLLK
>Mature_351_residues
SGFYSEKIFTNELFDVFKQDAAIVVYLKKENNLIISSWINGGYQENLKYIVNQTLDGTDYDEMVSMDYSTFQTRCMEKIN
LNPNESAGMATSACMDNYAISVYEYKDLKVTSIVTAGADNNGIKAGDPASFYEHNNEYNLDVGTINIITIIDANLEPGTL
ITASITATEAKTSVLQDLKLESQFSTHIATGTGTDGICVISNKSSENHIENAGKHSKLGEIIAKSVQEATRKALYLQTEM
CISYQKSVLNRLSRFNIDFDTFYNKTEGITKTDYAMKFNNFNSNTENIAYISGIIDLIDETQTNLLEICDVVHPIKNIIK
LFLDVEYDVEFNSIDDVLNYLIDAINTHLLK

Specific function: Unknown

COG id: COG1865

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002808 [H]

Pfam domain/function: PF01955 CbiZ [H]

EC number: NA

Molecular weight: Translated: 39444; Mature: 39312

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGFYSEKIFTNELFDVFKQDAAIVVYLKKENNLIISSWINGGYQENLKYIVNQTLDGTD
CCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCC
YDEMVSMDYSTFQTRCMEKINLNPNESAGMATSACMDNYAISVYEYKDLKVTSIVTAGAD
HHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEEEEECCEEEEEEEEECCC
NNGIKAGDPASFYEHNNEYNLDVGTINIITIIDANLEPGTLITASITATEAKTSVLQDLK
CCCCCCCCCHHHHHCCCEEEEEECEEEEEEEEECCCCCCEEEEEEEEHHHHHHHHHHHHH
LESQFSTHIATGTGTDGICVISNKSSENHIENAGKHSKLGEIIAKSVQEATRKALYLQTE
HHHHHHHEEECCCCCCCEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MCISYQKSVLNRLSRFNIDFDTFYNKTEGITKTDYAMKFNNFNSNTENIAYISGIIDLID
HHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH
ETQTNLLEICDVVHPIKNIIKLFLDVEYDVEFNSIDDVLNYLIDAINTHLLK
HHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SGFYSEKIFTNELFDVFKQDAAIVVYLKKENNLIISSWINGGYQENLKYIVNQTLDGTD
CCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCC
YDEMVSMDYSTFQTRCMEKINLNPNESAGMATSACMDNYAISVYEYKDLKVTSIVTAGAD
HHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEEEEECCEEEEEEEEECCC
NNGIKAGDPASFYEHNNEYNLDVGTINIITIIDANLEPGTLITASITATEAKTSVLQDLK
CCCCCCCCCHHHHHCCCEEEEEECEEEEEEEEECCCCCCEEEEEEEEHHHHHHHHHHHHH
LESQFSTHIATGTGTDGICVISNKSSENHIENAGKHSKLGEIIAKSVQEATRKALYLQTE
HHHHHHHEEECCCCCCCEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MCISYQKSVLNRLSRFNIDFDTFYNKTEGITKTDYAMKFNNFNSNTENIAYISGIIDLID
HHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH
ETQTNLLEICDVVHPIKNIIKLFLDVEYDVEFNSIDDVLNYLIDAINTHLLK
HHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]