Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is guaB
Identifier: 84489243
GI number: 84489243
Start: 498754
End: 500250
Strand: Direct
Name: guaB
Synonym: Msp_0431
Alternate gene names: 84489243
Gene position: 498754-500250 (Clockwise)
Preceding gene: 84489242
Following gene: 84489244
Centisome position: 28.22
GC content: 33.07
Gene sequence:
>1497_bases ATGAATAAATATATGGATAAATTAACAAAAGCAGAAGACACATATACATTTGATGATTTTCTTATAAAACCAGGATTATC ATGTATAGAACCAAATGATGTAAAATTAGATACACAAGTATCTACAAACTATCATTTAAACACACCAGTTGTAAGTTCGG CTATGGATACTGTTACAGAAGCAAACATGGCAATATCTCTAGCAAGACAAGGTGGACTTGGTGTTATTCATAGAAATTTA ACTATTGAACAAGAAATTAAAGAAATTAAAAAGGTTAAATATGCTAATGAATTAACAGTTAAAGAAGTTATATCAATATC TCCTGATGAAACAGTTTCTGAAGCACAACAAATCATGGATATTGAAGAAATAAGTGGTTTACCCGTAGTAAATGATGATA ATATTGTTGTAGGTATTATAAGTCGTAGAGATATTAAACCTTTAAGAGGTAAATACTTAAATCGTAAAGTATCCGATGCA ATGACTCAGGAAGTAGTTACAATCTCTGAAAACACAACTACTGAAGAAGCATTAGATGTTGCATATGAAAATAAAGTTGA AAGGTTACCAGTAGTTTCTGATGTTAATGAACTTCTTGGTATAGTAACAATGAAAGATATTTTAGAACGTAAAAAATATC CTGATGCAGCACGTGATAAAAATGGTAGATATCTTGTTGCAGCAGCATGTGGTCCGTTTGATATTGAAAGAGCAATGGCA ATAGATGATGCTGGGGCAGATATTATTGCTATAGATAGTGCACATGGACATAAAACTGATATTTTCAAATCTGTTAATGA AATGAAGAAAAATGTTGATGCAGATATATTACTTGGTAATATTGCAACTGCAAAGGCTGCAAAAGACATGTTAGATGCAA CAGAAATTGATGGTATAAAAGTTGGTATAGGTCCAGGTTCAATTTGTACCACTAGGATAGTTGCAGGTGTAGGTGTACCT CAACTTAGTGCTGTTTCAAGTGTTGCAGATGTAGCAGAAGATCATGGAATACCTGTAATTGCTGATGGTGGTTTAAGATA CTCTGGAGATATAGCAAAAGCATTAGCTGTTGGAGCAAATGCAGTTATGCTAGGTAGTTTACTTGCTGGAACAACTGAAT CTCCTGGGGAAATGACTATTAGAAATGGACGTAAATATAAACAATATCGTGGAATGGGTTCTTTAGGTGCTATGACTGGT GGAGTTGGAGCAGGAAAAGATAGGTATTTCCAAGGTTCAAGTAGTAATATGAATTCCTCAAAATTAGTACCAGAAGGTAT TGAAGGAGTAGTTCCATATAAAGGAGAAGCTAGTCAAATAGTTTATCAATTAATGGGTGGTTTAAAATCATCAATGGGTT ATGTTGGGGCTAAATCAATTAAAGAAATGCATGAAAAAGCAGAATTAGTTCATATAACTCCTAATGGTATGTCTGAAAGT CATCCTCATGATATTACCATTACTAATGAAAGTCCAAACTATCATCCAAGATATTAA
Upstream 100 bases:
>100_bases AGATAAAAATAATACTAATAGAAATACTAATAATATTTTTTTTAAATTTTTTTAGTATATGACTTTTGAATGATTATTTA TTAAATAAAAGGGGCGTTAT
Downstream 100 bases:
>100_bases ATAAAAATAAATCTAAGCTCCTTTTATTATTTTTTTTTAAATTATTTGAGAATGTGTAAGAATTAATTTTTAATTAATAT TTTTTTTCTTATTTTAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 498; Mature: 498
Protein sequence:
>498_residues MNKYMDKLTKAEDTYTFDDFLIKPGLSCIEPNDVKLDTQVSTNYHLNTPVVSSAMDTVTEANMAISLARQGGLGVIHRNL TIEQEIKEIKKVKYANELTVKEVISISPDETVSEAQQIMDIEEISGLPVVNDDNIVVGIISRRDIKPLRGKYLNRKVSDA MTQEVVTISENTTTEEALDVAYENKVERLPVVSDVNELLGIVTMKDILERKKYPDAARDKNGRYLVAAACGPFDIERAMA IDDAGADIIAIDSAHGHKTDIFKSVNEMKKNVDADILLGNIATAKAAKDMLDATEIDGIKVGIGPGSICTTRIVAGVGVP QLSAVSSVADVAEDHGIPVIADGGLRYSGDIAKALAVGANAVMLGSLLAGTTESPGEMTIRNGRKYKQYRGMGSLGAMTG GVGAGKDRYFQGSSSNMNSSKLVPEGIEGVVPYKGEASQIVYQLMGGLKSSMGYVGAKSIKEMHEKAELVHITPNGMSES HPHDITITNESPNYHPRY
Sequences:
>Translated_498_residues MNKYMDKLTKAEDTYTFDDFLIKPGLSCIEPNDVKLDTQVSTNYHLNTPVVSSAMDTVTEANMAISLARQGGLGVIHRNL TIEQEIKEIKKVKYANELTVKEVISISPDETVSEAQQIMDIEEISGLPVVNDDNIVVGIISRRDIKPLRGKYLNRKVSDA MTQEVVTISENTTTEEALDVAYENKVERLPVVSDVNELLGIVTMKDILERKKYPDAARDKNGRYLVAAACGPFDIERAMA IDDAGADIIAIDSAHGHKTDIFKSVNEMKKNVDADILLGNIATAKAAKDMLDATEIDGIKVGIGPGSICTTRIVAGVGVP QLSAVSSVADVAEDHGIPVIADGGLRYSGDIAKALAVGANAVMLGSLLAGTTESPGEMTIRNGRKYKQYRGMGSLGAMTG GVGAGKDRYFQGSSSNMNSSKLVPEGIEGVVPYKGEASQIVYQLMGGLKSSMGYVGAKSIKEMHEKAELVHITPNGMSES HPHDITITNESPNYHPRY >Mature_498_residues MNKYMDKLTKAEDTYTFDDFLIKPGLSCIEPNDVKLDTQVSTNYHLNTPVVSSAMDTVTEANMAISLARQGGLGVIHRNL TIEQEIKEIKKVKYANELTVKEVISISPDETVSEAQQIMDIEEISGLPVVNDDNIVVGIISRRDIKPLRGKYLNRKVSDA MTQEVVTISENTTTEEALDVAYENKVERLPVVSDVNELLGIVTMKDILERKKYPDAARDKNGRYLVAAACGPFDIERAMA IDDAGADIIAIDSAHGHKTDIFKSVNEMKKNVDADILLGNIATAKAAKDMLDATEIDGIKVGIGPGSICTTRIVAGVGVP QLSAVSSVADVAEDHGIPVIADGGLRYSGDIAKALAVGANAVMLGSLLAGTTESPGEMTIRNGRKYKQYRGMGSLGAMTG GVGAGKDRYFQGSSSNMNSSKLVPEGIEGVVPYKGEASQIVYQLMGGLKSSMGYVGAKSIKEMHEKAELVHITPNGMSES HPHDITITNESPNYHPRY
Specific function: IMP is the rate limiting enzyme in the de novo synthesis of guanine nucleotides and therefore is involved in the regulation of cell growth [H]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI34328930, Length=462, Percent_Identity=37.2294372294372, Blast_Score=278, Evalue=6e-75, Organism=Homo sapiens, GI217035146, Length=462, Percent_Identity=37.012987012987, Blast_Score=278, Evalue=7e-75, Organism=Homo sapiens, GI156616279, Length=462, Percent_Identity=37.2294372294372, Blast_Score=278, Evalue=7e-75, Organism=Homo sapiens, GI34328928, Length=462, Percent_Identity=37.2294372294372, Blast_Score=278, Evalue=7e-75, Organism=Homo sapiens, GI66933016, Length=474, Percent_Identity=36.9198312236287, Blast_Score=276, Evalue=4e-74, Organism=Homo sapiens, GI217035152, Length=464, Percent_Identity=37.2844827586207, Blast_Score=275, Evalue=6e-74, Organism=Homo sapiens, GI217035148, Length=462, Percent_Identity=36.7965367965368, Blast_Score=267, Evalue=2e-71, Organism=Homo sapiens, GI217035150, Length=474, Percent_Identity=34.5991561181435, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI50541954, Length=248, Percent_Identity=37.5, Blast_Score=149, Evalue=5e-36, Organism=Homo sapiens, GI50541952, Length=248, Percent_Identity=37.5, Blast_Score=149, Evalue=5e-36, Organism=Homo sapiens, GI50541948, Length=248, Percent_Identity=37.5, Blast_Score=149, Evalue=5e-36, Organism=Homo sapiens, GI50541956, Length=248, Percent_Identity=37.5, Blast_Score=149, Evalue=5e-36, Organism=Homo sapiens, GI156104880, Length=253, Percent_Identity=37.9446640316205, Blast_Score=149, Evalue=6e-36, Organism=Escherichia coli, GI1788855, Length=493, Percent_Identity=46.8559837728195, Blast_Score=398, Evalue=1e-112, Organism=Escherichia coli, GI1786293, Length=242, Percent_Identity=35.1239669421488, Blast_Score=132, Evalue=4e-32, Organism=Caenorhabditis elegans, GI71994385, Length=481, Percent_Identity=33.2640332640333, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI71994389, Length=423, Percent_Identity=35.2245862884161, Blast_Score=223, Evalue=3e-58, Organism=Caenorhabditis elegans, GI17560440, Length=226, Percent_Identity=36.283185840708, Blast_Score=142, Evalue=5e-34, Organism=Saccharomyces cerevisiae, GI6323585, Length=478, Percent_Identity=37.0292887029289, Blast_Score=278, Evalue=1e-75, Organism=Saccharomyces cerevisiae, GI6323464, Length=470, Percent_Identity=37.2340425531915, Blast_Score=274, Evalue=2e-74, Organism=Saccharomyces cerevisiae, GI6322012, Length=462, Percent_Identity=36.5800865800866, Blast_Score=269, Evalue=8e-73, Organism=Saccharomyces cerevisiae, GI6319352, Length=337, Percent_Identity=34.7181008902077, Blast_Score=187, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6319353, Length=121, Percent_Identity=42.9752066115703, Blast_Score=83, Evalue=9e-17, Organism=Drosophila melanogaster, GI24641071, Length=460, Percent_Identity=36.0869565217391, Blast_Score=268, Evalue=5e-72, Organism=Drosophila melanogaster, GI24641073, Length=460, Percent_Identity=36.0869565217391, Blast_Score=268, Evalue=5e-72, Organism=Drosophila melanogaster, GI28571163, Length=421, Percent_Identity=36.104513064133, Blast_Score=241, Evalue=6e-64,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 53594; Mature: 53594
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKYMDKLTKAEDTYTFDDFLIKPGLSCIEPNDVKLDTQVSTNYHLNTPVVSSAMDTVTE CCHHHHHHHCCCCCEEHHHHHHCCCCCCCCCCCEEEEEEECCCEEECCCHHHHHHHHHHH ANMAISLARQGGLGVIHRNLTIEQEIKEIKKVKYANELTVKEVISISPDETVSEAQQIMD HHHHEEEECCCCCEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHH IEEISGLPVVNDDNIVVGIISRRDIKPLRGKYLNRKVSDAMTQEVVTISENTTTEEALDV HHHHCCCCEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHH AYENKVERLPVVSDVNELLGIVTMKDILERKKYPDAARDKNGRYLVAAACGPFDIERAMA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEEEECCCCCCHHHHHE IDDAGADIIAIDSAHGHKTDIFKSVNEMKKNVDADILLGNIATAKAAKDMLDATEIDGIK ECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCEE VGIGPGSICTTRIVAGVGVPQLSAVSSVADVAEDHGIPVIADGGLRYSGDIAKALAVGAN EECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCEEECCHHHHHHHHCCC AVMLGSLLAGTTESPGEMTIRNGRKYKQYRGMGSLGAMTGGVGAGKDRYFQGSSSNMNSS HHHHHHHHHCCCCCCCCEEECCCCHHHHHCCCCCHHHCCCCCCCCCCCEECCCCCCCCCC KLVPEGIEGVVPYKGEASQIVYQLMGGLKSSMGYVGAKSIKEMHEKAELVHITPNGMSES CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCCCC HPHDITITNESPNYHPRY CCCEEEEECCCCCCCCCC >Mature Secondary Structure MNKYMDKLTKAEDTYTFDDFLIKPGLSCIEPNDVKLDTQVSTNYHLNTPVVSSAMDTVTE CCHHHHHHHCCCCCEEHHHHHHCCCCCCCCCCCEEEEEEECCCEEECCCHHHHHHHHHHH ANMAISLARQGGLGVIHRNLTIEQEIKEIKKVKYANELTVKEVISISPDETVSEAQQIMD HHHHEEEECCCCCEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHH IEEISGLPVVNDDNIVVGIISRRDIKPLRGKYLNRKVSDAMTQEVVTISENTTTEEALDV HHHHCCCCEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHH AYENKVERLPVVSDVNELLGIVTMKDILERKKYPDAARDKNGRYLVAAACGPFDIERAMA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEEEECCCCCCHHHHHE IDDAGADIIAIDSAHGHKTDIFKSVNEMKKNVDADILLGNIATAKAAKDMLDATEIDGIK ECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCEE VGIGPGSICTTRIVAGVGVPQLSAVSSVADVAEDHGIPVIADGGLRYSGDIAKALAVGAN EECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCEEECCHHHHHHHHCCC AVMLGSLLAGTTESPGEMTIRNGRKYKQYRGMGSLGAMTGGVGAGKDRYFQGSSSNMNSS HHHHHHHHHCCCCCCCCEEECCCCHHHHHCCCCCHHHCCCCCCCCCCCEECCCCCCCCCC KLVPEGIEGVVPYKGEASQIVYQLMGGLKSSMGYVGAKSIKEMHEKAELVHITPNGMSES CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCCCC HPHDITITNESPNYHPRY CCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]