Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
---|---|
Accession | NC_007681 |
Length | 1,767,403 |
Click here to switch to the map view.
The map label for this gene is pgk2-2
Identifier: 84489218
GI number: 84489218
Start: 468812
End: 469771
Strand: Direct
Name: pgk2-2
Synonym: Msp_0406
Alternate gene names: 84489218
Gene position: 468812-469771 (Clockwise)
Preceding gene: 84489217
Following gene: 84489219
Centisome position: 26.53
GC content: 27.4
Gene sequence:
>960_bases ATGAAACCTTATGTTATTTTAATTAGTTCTGCATCAGGTATTGGTAAGTCAACAATAGCATCAGAAGTAGCAAATACTCT GGGAATTAAGTATTTGATAGAAACAGATTTTATAAGGGCAATAGTAAGAGGTATTATAGGGTCAGAATATGCGCCAGCTC TACATAAATCATCATACAATGCATATACAACACTAAGAGATACATATAATTTTAAATCAGAGGAAGAGTTAATTACTGCA GGATATGAAGAACATGCTTCATTTGTAATTCCTGCTATAGAAAAAGTAATTTCAAGATGTGTTTTAGACAATGATTCAAT AGTAATTGAAGGAGTACATCTAGTTCCAGGTTTAATTAATATAAAACAATTTGAAGATTTGGCTAATATTCATTTTTTTG TATTAACAGTTGATGAAAAACAACACCAGGAAAGATTTATACAAAGGGCTCTTGCCATAAAAAGAGGTGGAACACAGATT GATTACTTTAAGGAAAATAGAATAATTAATGATGCTCTAGTTAGTCAAGCAAAAACACTCAATATTCCAGTAATTTTCAA TAATAATAAGGATACAACAGTAAAAAAGGTATTACAGTACATAAATGAAGTATCAAGAATTGTGTTTGTAAGACATACAG TTGATGATATAGATTTAGAAAGGGAGATTATAACTAAGCATGGTGGAAGAATAACTGATATTTCATATTATATTCCAGAA TTTAAAGAACCATTAACGAGAATTGTGGAAAATTATGAGGATAATACATCCTCTGGTAAATTTATAAATGTAATAGAACA TGAAACTAAACAAAAAGAATCATTAGGAACATTATATGAATTATCAAACAATATACATAGTCATCATTTATATGCACCAG ATGAAAATAAATTAAACGATATAATTCAGGAATTAAAAGAAAATAATCTTTTATATGATGAAAATCTTGTAAAAAAATAA
Upstream 100 bases:
>100_bases CTTTTTAAATTTATTTATCTCTTTTTAATAACATTATAATAATTACACTATACAGATGTATATATTATATAATAAAATTT TTTAATTAATAGGTGGTATT
Downstream 100 bases:
>100_bases ATACATATTGCATATATAAATTTAGTATAGATAAAAGAGGAATTAAAAACATGGATGAAAAAACATTTAATAATAATGAT TTAATGAAATCAGATTGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: 2PGK [H]
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MKPYVILISSASGIGKSTIASEVANTLGIKYLIETDFIRAIVRGIIGSEYAPALHKSSYNAYTTLRDTYNFKSEEELITA GYEEHASFVIPAIEKVISRCVLDNDSIVIEGVHLVPGLINIKQFEDLANIHFFVLTVDEKQHQERFIQRALAIKRGGTQI DYFKENRIINDALVSQAKTLNIPVIFNNNKDTTVKKVLQYINEVSRIVFVRHTVDDIDLEREIITKHGGRITDISYYIPE FKEPLTRIVENYEDNTSSGKFINVIEHETKQKESLGTLYELSNNIHSHHLYAPDENKLNDIIQELKENNLLYDENLVKK
Sequences:
>Translated_319_residues MKPYVILISSASGIGKSTIASEVANTLGIKYLIETDFIRAIVRGIIGSEYAPALHKSSYNAYTTLRDTYNFKSEEELITA GYEEHASFVIPAIEKVISRCVLDNDSIVIEGVHLVPGLINIKQFEDLANIHFFVLTVDEKQHQERFIQRALAIKRGGTQI DYFKENRIINDALVSQAKTLNIPVIFNNNKDTTVKKVLQYINEVSRIVFVRHTVDDIDLEREIITKHGGRITDISYYIPE FKEPLTRIVENYEDNTSSGKFINVIEHETKQKESLGTLYELSNNIHSHHLYAPDENKLNDIIQELKENNLLYDENLVKK >Mature_319_residues MKPYVILISSASGIGKSTIASEVANTLGIKYLIETDFIRAIVRGIIGSEYAPALHKSSYNAYTTLRDTYNFKSEEELITA GYEEHASFVIPAIEKVISRCVLDNDSIVIEGVHLVPGLINIKQFEDLANIHFFVLTVDEKQHQERFIQRALAIKRGGTQI DYFKENRIINDALVSQAKTLNIPVIFNNNKDTTVKKVLQYINEVSRIVFVRHTVDDIDLEREIITKHGGRITDISYYIPE FKEPLTRIVENYEDNTSSGKFINVIEHETKQKESLGTLYELSNNIHSHHLYAPDENKLNDIIQELKENNLLYDENLVKK
Specific function: Unknown
COG id: COG2074
COG function: function code G; 2-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-cone domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020872 - InterPro: IPR005144 - InterPro: IPR010488 [H]
Pfam domain/function: PF03477 ATP-cone; PF06414 Zeta_toxin [H]
EC number: NA
Molecular weight: Translated: 36457; Mature: 36457
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPYVILISSASGIGKSTIASEVANTLGIKYLIETDFIRAIVRGIIGSEYAPALHKSSYN CCCEEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCC AYTTLRDTYNFKSEEELITAGYEEHASFVIPAIEKVISRCVLDNDSIVIEGVHLVPGLIN CEEEEHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCHHH IKQFEDLANIHFFVLTVDEKQHQERFIQRALAIKRGGTQIDYFKENRIINDALVSQAKTL HHHHHHHCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCHHEE NIPVIFNNNKDTTVKKVLQYINEVSRIVFVRHTVDDIDLEREIITKHGGRITDISYYIPE EEEEEEECCCCHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCEEEEHHHHCCH FKEPLTRIVENYEDNTSSGKFINVIEHETKQKESLGTLYELSNNIHSHHLYAPDENKLND HHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHH IIQELKENNLLYDENLVKK HHHHHHHCCCEECHHHHCC >Mature Secondary Structure MKPYVILISSASGIGKSTIASEVANTLGIKYLIETDFIRAIVRGIIGSEYAPALHKSSYN CCCEEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCC AYTTLRDTYNFKSEEELITAGYEEHASFVIPAIEKVISRCVLDNDSIVIEGVHLVPGLIN CEEEEHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCHHH IKQFEDLANIHFFVLTVDEKQHQERFIQRALAIKRGGTQIDYFKENRIINDALVSQAKTL HHHHHHHCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCHHEE NIPVIFNNNKDTTVKKVLQYINEVSRIVFVRHTVDDIDLEREIITKHGGRITDISYYIPE EEEEEEECCCCHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCEEEEHHHHCCH FKEPLTRIVENYEDNTSSGKFINVIEHETKQKESLGTLYELSNNIHSHHLYAPDENKLND HHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHH IIQELKENNLLYDENLVKK HHHHHHHCCCEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]