Click here to switch to the map view.

The map label for this gene is 84489215

Identifier: 84489215

GI number: 84489215

Start: 466209

End: 466778

Strand: Direct

Name: 84489215

Synonym: Msp_0403

Alternate gene names: NA

Gene position: 466209-466778 (Clockwise)

Preceding gene: 84489214

Following gene: 84489216

Centisome position: 26.38

GC content: 29.47

Gene sequence:

>570_bases
ATGCAATGTGGATTATTAACTGAAAAAGAAGGTAATCTTCTTCTTAAAATAGCACGTGATAATATTCGTTGTTATCTAGA
AAATAAGGACTATCAAATACCAGAAGATATTCCCTCAATTTTTAGGGAAAAATTAGGTGTATTTGTAACTTTGAATATTA
ATAATAATTTAAGGGGCTGTATTGGTTATCCAGAACCATATAAACCATTAATTGATGCTGTTTTAGATGTTTCAATAGCA
GCTGCAGTAAATGATCCACGTTTTATGCCATTAACATTAGATGAATTTCAAAATATTACTATTGAAATAAGTGTACTTAC
AAAACCTACAAAAGTAATAGTTAAGGATTATAATGAATATCTTGATAAACTAGAAGTAGGTGTTGATGGTTTAATTATCG
AATCTGATTATAATAGGGGTTTATTACTTCCACAAGTACCTATAGAACAAAACTGGGATATTGAAGAGTTTCTTGAAAAT
TTATGTTATAAGGCAGGCTTAGCCTCTGATGCATGGATGAGTGCTACAACAGACATATTTAAGTTTCAAGCACAAATATT
TCAAGAATAG

Upstream 100 bases:

>100_bases
TAAGTGTAGGGTTCTGTGGTAAAGATGGTCAAACAGCACCTGTAGGTGATGGGGGACCTCATATAAGAGTAAGTAAGGCA
ACTGTTGGTGGGGTATAAAA

Downstream 100 bases:

>100_bases
GATAAATTATTTTAGAATAACATATAAGGAGAATGAAACATGAAATTGCCACATATACCAACACCAGATGAAATTATTGA
CAAGGCATTTAACAGGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MQCGLLTEKEGNLLLKIARDNIRCYLENKDYQIPEDIPSIFREKLGVFVTLNINNNLRGCIGYPEPYKPLIDAVLDVSIA
AAVNDPRFMPLTLDEFQNITIEISVLTKPTKVIVKDYNEYLDKLEVGVDGLIIESDYNRGLLLPQVPIEQNWDIEEFLEN
LCYKAGLASDAWMSATTDIFKFQAQIFQE

Sequences:

>Translated_189_residues
MQCGLLTEKEGNLLLKIARDNIRCYLENKDYQIPEDIPSIFREKLGVFVTLNINNNLRGCIGYPEPYKPLIDAVLDVSIA
AAVNDPRFMPLTLDEFQNITIEISVLTKPTKVIVKDYNEYLDKLEVGVDGLIIESDYNRGLLLPQVPIEQNWDIEEFLEN
LCYKAGLASDAWMSATTDIFKFQAQIFQE
>Mature_189_residues
MQCGLLTEKEGNLLLKIARDNIRCYLENKDYQIPEDIPSIFREKLGVFVTLNINNNLRGCIGYPEPYKPLIDAVLDVSIA
AAVNDPRFMPLTLDEFQNITIEISVLTKPTKVIVKDYNEYLDKLEVGVDGLIIESDYNRGLLLPQVPIEQNWDIEEFLEN
LCYKAGLASDAWMSATTDIFKFQAQIFQE

Specific function: Unknown

COG id: COG2078

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 AMMECR1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002733 [H]

Pfam domain/function: PF01871 AMMECR1 [H]

EC number: NA

Molecular weight: Translated: 21582; Mature: 21582

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: PS51112 AMMECR1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQCGLLTEKEGNLLLKIARDNIRCYLENKDYQIPEDIPSIFREKLGVFVTLNINNNLRGC
CCCCCEEECCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCEE
IGYPEPYKPLIDAVLDVSIAAAVNDPRFMPLTLDEFQNITIEISVLTKPTKVIVKDYNEY
ECCCCCHHHHHHHHHHHHHEEECCCCCEEEEEHHHHCCEEEEEEEECCCHHHHHHHHHHH
LDKLEVGVDGLIIESDYNRGLLLPQVPIEQNWDIEEFLENLCYKAGLASDAWMSATTDIF
HHHHHCCCCEEEEECCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
KFQAQIFQE
HHHHHHHCC
>Mature Secondary Structure
MQCGLLTEKEGNLLLKIARDNIRCYLENKDYQIPEDIPSIFREKLGVFVTLNINNNLRGC
CCCCCEEECCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCEE
IGYPEPYKPLIDAVLDVSIAAAVNDPRFMPLTLDEFQNITIEISVLTKPTKVIVKDYNEY
ECCCCCHHHHHHHHHHHHHEEECCCCCEEEEEHHHHCCEEEEEEEECCCHHHHHHHHHHH
LDKLEVGVDGLIIESDYNRGLLLPQVPIEQNWDIEEFLENLCYKAGLASDAWMSATTDIF
HHHHHCCCCEEEEECCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
KFQAQIFQE
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]