Click here to switch to the map view.

The map label for this gene is cbiQ1

Identifier: 84489212

GI number: 84489212

Start: 462495

End: 463307

Strand: Direct

Name: cbiQ1

Synonym: Msp_0400

Alternate gene names: NA

Gene position: 462495-463307 (Clockwise)

Preceding gene: 84489211

Following gene: 84489213

Centisome position: 26.17

GC content: 28.41

Gene sequence:

>813_bases
ATGTCAATATTTGAGGATACATTAGATCATTATGCTTCCCATAATAATTTAGTAGATGTTAATATTTATTACAAACTTTT
ATTCTCTGTAATTACATTAATTTTAAATTTATTTGCTAATTCACCAATAATGCCATTTATTATATTTATAATAAGTACAA
TTCTTATTTTATTTAAAGCAAAGATACCATCTAGATTTTATGCAACATTTATGTTAGTACCATTTAGTTTTGCTATAATA
TCAGTAGTATTTATGGCATTTTTCATTGGTATAGGTCCACATATTTGGGATTTAGGTCTTTTTGGATGGGGAATTACAGC
TGATGGTTTAAACAGGGGTGTACTTGTATTTTTCAAAGTAATGGGTGGTGTAGCTGCACTATCATTTCTTATATTAACAA
CACCTGTTAATAGGTTATTTGCAGTATTTAATGAGTTACATCTTCCAACCGAACTTGTTGATTTGGCAATATTAATGTAT
AGATACATATTCCTATTTTTAGATGTTACAGAAACAATGTATTACTCTCAAAAAACAAGACTTGGATATAATGGTTATTC
AAGTTGGATGAATTGTCTTGCAGCACTAGCTGGTATGGTATTTATAAGAACTTGGGAACAAGGAGAAATGGCATACAAGG
CATTAGCTTCAAGAGGATACAATGGAAAATTAAATATGTTCTACCATGGAAGTACAATTCATGACATAACAATTAAACAA
TGGATTATATTAATAGTATTTGAAGTAATACTAGCATATTCTATATATGTCACAGCATCAATAAATGTGGTACCTTATTT
AATACCAGTATAG

Upstream 100 bases:

>100_bases
AAAAAACATTATTAAGAAATTTTTTTTATAAAAATCTATTAAAATATTAGTTTTTCAAAAAATCGGAAGAAATAATTTTT
TATAAAGTGGTGAATAAATA

Downstream 100 bases:

>100_bases
ATAATAAATATTAATAGGATGGATTTTCATGACAACAATATTAGAAACTAAAAACTTAGTATATAACTATCCTGATGGAA
CAGAAGCTCTAAAAGGAATT

Product: CbiQ1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MSIFEDTLDHYASHNNLVDVNIYYKLLFSVITLILNLFANSPIMPFIIFIISTILILFKAKIPSRFYATFMLVPFSFAII
SVVFMAFFIGIGPHIWDLGLFGWGITADGLNRGVLVFFKVMGGVAALSFLILTTPVNRLFAVFNELHLPTELVDLAILMY
RYIFLFLDVTETMYYSQKTRLGYNGYSSWMNCLAALAGMVFIRTWEQGEMAYKALASRGYNGKLNMFYHGSTIHDITIKQ
WIILIVFEVILAYSIYVTASINVVPYLIPV

Sequences:

>Translated_270_residues
MSIFEDTLDHYASHNNLVDVNIYYKLLFSVITLILNLFANSPIMPFIIFIISTILILFKAKIPSRFYATFMLVPFSFAII
SVVFMAFFIGIGPHIWDLGLFGWGITADGLNRGVLVFFKVMGGVAALSFLILTTPVNRLFAVFNELHLPTELVDLAILMY
RYIFLFLDVTETMYYSQKTRLGYNGYSSWMNCLAALAGMVFIRTWEQGEMAYKALASRGYNGKLNMFYHGSTIHDITIKQ
WIILIVFEVILAYSIYVTASINVVPYLIPV
>Mature_269_residues
SIFEDTLDHYASHNNLVDVNIYYKLLFSVITLILNLFANSPIMPFIIFIISTILILFKAKIPSRFYATFMLVPFSFAIIS
VVFMAFFIGIGPHIWDLGLFGWGITADGLNRGVLVFFKVMGGVAALSFLILTTPVNRLFAVFNELHLPTELVDLAILMYR
YIFLFLDVTETMYYSQKTRLGYNGYSSWMNCLAALAGMVFIRTWEQGEMAYKALASRGYNGKLNMFYHGSTIHDITIKQW
IILIVFEVILAYSIYVTASINVVPYLIPV

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003339
- InterPro:   IPR012809 [H]

Pfam domain/function: PF02361 CbiQ [H]

EC number: NA

Molecular weight: Translated: 30757; Mature: 30626

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIFEDTLDHYASHNNLVDVNIYYKLLFSVITLILNLFANSPIMPFIIFIISTILILFKA
CCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
KIPSRFYATFMLVPFSFAIISVVFMAFFIGIGPHIWDLGLFGWGITADGLNRGVLVFFKV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
MGGVAALSFLILTTPVNRLFAVFNELHLPTELVDLAILMYRYIFLFLDVTETMYYSQKTR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LGYNGYSSWMNCLAALAGMVFIRTWEQGEMAYKALASRGYNGKLNMFYHGSTIHDITIKQ
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCEEEHHHHHH
WIILIVFEVILAYSIYVTASINVVPYLIPV
HHHHHHHHHHHHHHHHHEEEECEEEEEECC
>Mature Secondary Structure 
SIFEDTLDHYASHNNLVDVNIYYKLLFSVITLILNLFANSPIMPFIIFIISTILILFKA
CHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
KIPSRFYATFMLVPFSFAIISVVFMAFFIGIGPHIWDLGLFGWGITADGLNRGVLVFFKV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
MGGVAALSFLILTTPVNRLFAVFNELHLPTELVDLAILMYRYIFLFLDVTETMYYSQKTR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LGYNGYSSWMNCLAALAGMVFIRTWEQGEMAYKALASRGYNGKLNMFYHGSTIHDITIKQ
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCEEEHHHHHH
WIILIVFEVILAYSIYVTASINVVPYLIPV
HHHHHHHHHHHHHHHHHEEEECEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]