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The map label for this gene is cbiM1

Identifier: 84489210

GI number: 84489210

Start: 461379

End: 462053

Strand: Direct

Name: cbiM1

Synonym: Msp_0398

Alternate gene names: 84489210

Gene position: 461379-462053 (Clockwise)

Preceding gene: 84489208

Following gene: 84489211

Centisome position: 26.1

GC content: 33.78

Gene sequence:

>675_bases
ATGCATATAATGGAAGGTTTTCTGCCACCACTATGGTGTCTAATTTACTACATAATATGTATACCATTTATAGTTTATGG
TATAATGCAGATAAGAAAAGTTACTGCAGAAAGTGATGAAGCCATGCCTATGTTAGCATTATCTGGTGCTTTCATGTTTA
TATTATCATCATTAAAAATGCCATCTGTAACTGGTAGTTGTTCACATCCATGTGGTAATGGATTTGGTGCTGTATTCTTT
GGACCGGCAGTAGTAGGAGTTTTATCCGTAATAGTATTAGTATTCCAAGCAGTTATATTAGCACACGGAGGAATAACAAC
CCTTGGAGCAAACGTGTTATCCATGGGTATTATTGGTCCTTTATGTGGATATGCAGTTTGGTTAGGACTTAGAAAATTAA
ATGTAAATGATGAAATTGCAATGTTCTTTACAGCATTTGTCGCAGATTTAATGACATATGTGGTAACAGCTATAGAATTA
TCTTTAGCATTCCCAAAACCAGATTTCTTCACAGCTTTGGTTACTTTCTTAGGAATCTTTGCAGTTACCCAAATACCATT
AGCAATAGCTGAAGGTATATTAACAATGGTAATTTACAGATTCATTAAACAACAGAAACCAGATATTCTTGTAAAGTTAA
GAGTAATTTCAAAAGAAGAAGCAGGAGTTAACTAA

Upstream 100 bases:

>100_bases
AGTATTATACATTATTTTATTATAGATAATTAGAATTACTTGATAATAAAATAAATTTTATATTATATTTTTTTTATGGA
AAATATAAGGAGGAAAAATA

Downstream 100 bases:

>100_bases
AATGGTTTCAAACACAACAAAAAATATTATCCTACTTTTAATAGTAGGAGTATTGATTGTTCTCCCATTAGCTTATTATA
ATGGTCATGGTGAAGATGAT

Product: cobalt transport protein CbiM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MHIMEGFLPPLWCLIYYIICIPFIVYGIMQIRKVTAESDEAMPMLALSGAFMFILSSLKMPSVTGSCSHPCGNGFGAVFF
GPAVVGVLSVIVLVFQAVILAHGGITTLGANVLSMGIIGPLCGYAVWLGLRKLNVNDEIAMFFTAFVADLMTYVVTAIEL
SLAFPKPDFFTALVTFLGIFAVTQIPLAIAEGILTMVIYRFIKQQKPDILVKLRVISKEEAGVN

Sequences:

>Translated_224_residues
MHIMEGFLPPLWCLIYYIICIPFIVYGIMQIRKVTAESDEAMPMLALSGAFMFILSSLKMPSVTGSCSHPCGNGFGAVFF
GPAVVGVLSVIVLVFQAVILAHGGITTLGANVLSMGIIGPLCGYAVWLGLRKLNVNDEIAMFFTAFVADLMTYVVTAIEL
SLAFPKPDFFTALVTFLGIFAVTQIPLAIAEGILTMVIYRFIKQQKPDILVKLRVISKEEAGVN
>Mature_224_residues
MHIMEGFLPPLWCLIYYIICIPFIVYGIMQIRKVTAESDEAMPMLALSGAFMFILSSLKMPSVTGSCSHPCGNGFGAVFF
GPAVVGVLSVIVLVFQAVILAHGGITTLGANVLSMGIIGPLCGYAVWLGLRKLNVNDEIAMFFTAFVADLMTYVVTAIEL
SLAFPKPDFFTALVTFLGIFAVTQIPLAIAEGILTMVIYRFIKQQKPDILVKLRVISKEEAGVN

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002751
- InterPro:   IPR018024 [H]

Pfam domain/function: PF01891 CbiM [H]

EC number: NA

Molecular weight: Translated: 24278; Mature: 24278

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIMEGFLPPLWCLIYYIICIPFIVYGIMQIRKVTAESDEAMPMLALSGAFMFILSSLKM
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
PSVTGSCSHPCGNGFGAVFFGPAVVGVLSVIVLVFQAVILAHGGITTLGANVLSMGIIGP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LCGYAVWLGLRKLNVNDEIAMFFTAFVADLMTYVVTAIELSLAFPKPDFFTALVTFLGIF
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
AVTQIPLAIAEGILTMVIYRFIKQQKPDILVKLRVISKEEAGVN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MHIMEGFLPPLWCLIYYIICIPFIVYGIMQIRKVTAESDEAMPMLALSGAFMFILSSLKM
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
PSVTGSCSHPCGNGFGAVFFGPAVVGVLSVIVLVFQAVILAHGGITTLGANVLSMGIIGP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LCGYAVWLGLRKLNVNDEIAMFFTAFVADLMTYVVTAIELSLAFPKPDFFTALVTFLGIF
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
AVTQIPLAIAEGILTMVIYRFIKQQKPDILVKLRVISKEEAGVN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]