Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489193
Identifier: 84489193
GI number: 84489193
Start: 445743
End: 446444
Strand: Direct
Name: 84489193
Synonym: Msp_0381
Alternate gene names: NA
Gene position: 445743-446444 (Clockwise)
Preceding gene: 84489192
Following gene: 84489194
Centisome position: 25.22
GC content: 21.37
Gene sequence:
>702_bases ATGATTCTTCAAATTATATTTATGTTGTTATTAATTGTAATTTTATTAATATTCATATTCTTTTTGAAGCCATTGGGTGT ATATTTATCATTTCATAGAAATAATCAAGCTTTGAATGGTGAAATAATAATTACACATTATTTTTTAAAGTTAAGATATG TTTTTGAAAAGAAAGCTTTAGATGTGTTTGTAATATGGAAATCAAGGAATTTTCTACTTAGAACTATAAATTTAGATTCT ATAGATGAAAATAATTCTAATGATAATAATGATGGTGATGAGGATAAAGGGGAAGATAACACTGATGAATATGAAGATGA ATTTTCAAGTAATTTATTAGAAAATGCTAAAGAAATATATCCAACACTAAAAGCATCTACATCAGATTTATATAAAATTG TAGTTTTAATTGTAACTTTATGTAAATTTAAGGAAAGTAACATTAAATTAGATTTTGGTTTGAAAAATAATAATTTAACA ATAAAGATTTGTAATATTTTATGGGCTATAACAGCACCATTATATCCTTTTGATATTCATATTCTAATAACACCTGTTAT AAATAAGGCTGTTGTTAATTTTGATTGTGAAGTTTCATTTGATATTATAATAATGAATATACTACGAATAATATTCAAGA TAATTACAAGTATAAATATATTAAAATTAATAATAAAAATAATTAAAATCGCACGTAGGTGA
Upstream 100 bases:
>100_bases AGTACTGAAAGTACTAAATCTACTCAGAAAAAAGATACTAATTAAGTATTCTTTTAATTTTTTTTAAATATTTTTTTAAG TAATTTCTAGGGCTAAATTT
Downstream 100 bases:
>100_bases TTAAATGTCAATTACTAAAAAATATTTTATTGATCCTATAATAATCAATAATAGAAAGATATATCCCTATGTAAAATTAG ATGTGGATGTTATTGGTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MILQIIFMLLLIVILLIFIFFLKPLGVYLSFHRNNQALNGEIIITHYFLKLRYVFEKKALDVFVIWKSRNFLLRTINLDS IDENNSNDNNDGDEDKGEDNTDEYEDEFSSNLLENAKEIYPTLKASTSDLYKIVVLIVTLCKFKESNIKLDFGLKNNNLT IKICNILWAITAPLYPFDIHILITPVINKAVVNFDCEVSFDIIIMNILRIIFKIITSINILKLIIKIIKIARR
Sequences:
>Translated_233_residues MILQIIFMLLLIVILLIFIFFLKPLGVYLSFHRNNQALNGEIIITHYFLKLRYVFEKKALDVFVIWKSRNFLLRTINLDS IDENNSNDNNDGDEDKGEDNTDEYEDEFSSNLLENAKEIYPTLKASTSDLYKIVVLIVTLCKFKESNIKLDFGLKNNNLT IKICNILWAITAPLYPFDIHILITPVINKAVVNFDCEVSFDIIIMNILRIIFKIITSINILKLIIKIIKIARR >Mature_233_residues MILQIIFMLLLIVILLIFIFFLKPLGVYLSFHRNNQALNGEIIITHYFLKLRYVFEKKALDVFVIWKSRNFLLRTINLDS IDENNSNDNNDGDEDKGEDNTDEYEDEFSSNLLENAKEIYPTLKASTSDLYKIVVLIVTLCKFKESNIKLDFGLKNNNLT IKICNILWAITAPLYPFDIHILITPVINKAVVNFDCEVSFDIIIMNILRIIFKIITSINILKLIIKIIKIARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27105; Mature: 27105
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILQIIFMLLLIVILLIFIFFLKPLGVYLSFHRNNQALNGEIIITHYFLKLRYVFEKKAL CHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEHHHHHHHHHHHHHCCC DVFVIWKSRNFLLRTINLDSIDENNSNDNNDGDEDKGEDNTDEYEDEFSSNLLENAKEIY EEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH PTLKASTSDLYKIVVLIVTLCKFKESNIKLDFGLKNNNLTIKICNILWAITAPLYPFDIH HHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEHHHHHHHHHCCCCCEEEE ILITPVINKAVVNFDCEVSFDIIIMNILRIIFKIITSINILKLIIKIIKIARR EEEEEHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MILQIIFMLLLIVILLIFIFFLKPLGVYLSFHRNNQALNGEIIITHYFLKLRYVFEKKAL CHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEHHHHHHHHHHHHHCCC DVFVIWKSRNFLLRTINLDSIDENNSNDNNDGDEDKGEDNTDEYEDEFSSNLLENAKEIY EEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH PTLKASTSDLYKIVVLIVTLCKFKESNIKLDFGLKNNNLTIKICNILWAITAPLYPFDIH HHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEHHHHHHHHHCCCCCEEEE ILITPVINKAVVNFDCEVSFDIIIMNILRIIFKIITSINILKLIIKIIKIARR EEEEEHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA