Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489191
Identifier: 84489191
GI number: 84489191
Start: 444013
End: 444765
Strand: Direct
Name: 84489191
Synonym: Msp_0377
Alternate gene names: NA
Gene position: 444013-444765 (Clockwise)
Preceding gene: 84489190
Following gene: 84489192
Centisome position: 25.12
GC content: 27.09
Gene sequence:
>753_bases ATGAATTATATAGTATGTCGAAATTGTAAAAGAGTTATTGAGGTTAAGGAAAATACTCCATTAGTCTTTGATAAATGTGA AAATTGTGGACATACCCTTGAATTTGCAGCTGATAATCGTGACTTACAATTTATATTAAATGATGTAGAAGTACCAAAAA TAGCATACCATAAAATATGTGCTAAATGTAAATCATTGAATCCACGTGAAACTGGTGCTTGCCTATTCTGTGGATCTACA AGTTTTAAGTATCAATATGATTTAGATAGTTTAAATAAGTATAAAAATAGTTTAAATTTGAATCAGATGCAAATGACAAA CATGTCTGATAATTATCAACAATCAATTTCAAATAATTGGCTTTATAGAATATTAGCTTTAATACTTGGAATAATTGATT TTTTCTTTGTTGTTATGATTGGACTTGGTTTAATTATAGGTGATGGTCCACTACCAACAGATTCTATGGCATTTATTATG CAACATTTTAATATGATGATGATTGTGTTAATAGTGGCACTATTTGTTTCAGGTTTTCTTTCAATTTTCATATTACCAAA AATGAAATATAAAGATTCATTCATGTTATCAGGATTACTTGGACTTATTATTGGATTAATCACAATAATAACAACTACTG ATATATTAGTAATTATACCATCAATGGTATTGTGTGCTATAATAACTGGAATTGGTGGATTAGTTGCACAATTTATTGTT CATAAAATAATTGGAAGATTTTTTGGCAGATAA
Upstream 100 bases:
>100_bases TAATTGAAGGTAAAAGAACATATCTCTTAGCACAAAGAATATAATATGTATAATTAATTAAAAGAGTAAATAAATAAAAA AATAGAAAAGATTTGATATT
Downstream 100 bases:
>100_bases AAACTGCTATTAATCTATTTATCTTTTTTTGTAGAATTATTAAAATAGCTTTTTTAAATGTGTGCATACTAATACACTTT ATACTATAGACTTAATTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MNYIVCRNCKRVIEVKENTPLVFDKCENCGHTLEFAADNRDLQFILNDVEVPKIAYHKICAKCKSLNPRETGACLFCGST SFKYQYDLDSLNKYKNSLNLNQMQMTNMSDNYQQSISNNWLYRILALILGIIDFFFVVMIGLGLIIGDGPLPTDSMAFIM QHFNMMMIVLIVALFVSGFLSIFILPKMKYKDSFMLSGLLGLIIGLITIITTTDILVIIPSMVLCAIITGIGGLVAQFIV HKIIGRFFGR
Sequences:
>Translated_250_residues MNYIVCRNCKRVIEVKENTPLVFDKCENCGHTLEFAADNRDLQFILNDVEVPKIAYHKICAKCKSLNPRETGACLFCGST SFKYQYDLDSLNKYKNSLNLNQMQMTNMSDNYQQSISNNWLYRILALILGIIDFFFVVMIGLGLIIGDGPLPTDSMAFIM QHFNMMMIVLIVALFVSGFLSIFILPKMKYKDSFMLSGLLGLIIGLITIITTTDILVIIPSMVLCAIITGIGGLVAQFIV HKIIGRFFGR >Mature_250_residues MNYIVCRNCKRVIEVKENTPLVFDKCENCGHTLEFAADNRDLQFILNDVEVPKIAYHKICAKCKSLNPRETGACLFCGST SFKYQYDLDSLNKYKNSLNLNQMQMTNMSDNYQQSISNNWLYRILALILGIIDFFFVVMIGLGLIIGDGPLPTDSMAFIM QHFNMMMIVLIVALFVSGFLSIFILPKMKYKDSFMLSGLLGLIIGLITIITTTDILVIIPSMVLCAIITGIGGLVAQFIV HKIIGRFFGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28170; Mature: 28170
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYIVCRNCKRVIEVKENTPLVFDKCENCGHTLEFAADNRDLQFILNDVEVPKIAYHKIC CCEEECCCHHHHHHHCCCCCCHHHHHCCCCCEEEECCCCCCHHHHHCCCCCCHHHHHHHH AKCKSLNPRETGACLFCGSTSFKYQYDLDSLNKYKNSLNLNQMQMTNMSDNYQQSISNNW HHHHCCCCCCCCCEEEECCCCCEEEECHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHCCH LYRILALILGIIDFFFVVMIGLGLIIGDGPLPTDSMAFIMQHFNMMMIVLIVALFVSGFL HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIFILPKMKYKDSFMLSGLLGLIIGLITIITTTDILVIIPSMVLCAIITGIGGLVAQFIV HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HKIIGRFFGR HHHHHHHHCC >Mature Secondary Structure MNYIVCRNCKRVIEVKENTPLVFDKCENCGHTLEFAADNRDLQFILNDVEVPKIAYHKIC CCEEECCCHHHHHHHCCCCCCHHHHHCCCCCEEEECCCCCCHHHHHCCCCCCHHHHHHHH AKCKSLNPRETGACLFCGSTSFKYQYDLDSLNKYKNSLNLNQMQMTNMSDNYQQSISNNW HHHHCCCCCCCCCEEEECCCCCEEEECHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHCCH LYRILALILGIIDFFFVVMIGLGLIIGDGPLPTDSMAFIMQHFNMMMIVLIVALFVSGFL HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIFILPKMKYKDSFMLSGLLGLIIGLITIITTTDILVIIPSMVLCAIITGIGGLVAQFIV HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HKIIGRFFGR HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA