Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is porA
Identifier: 84489157
GI number: 84489157
Start: 397108
End: 398247
Strand: Direct
Name: porA
Synonym: Msp_0336
Alternate gene names: 84489157
Gene position: 397108-398247 (Clockwise)
Preceding gene: 84489156
Following gene: 84489158
Centisome position: 22.47
GC content: 33.42
Gene sequence:
>1140_bases ATGGTTAAAAAAGTTATATCATCTGCAGAAGCAGTATCTGAAGCAGTAAAACGTGCAAGACCTAGTGTTATACCTGTATA TCCAATTACACCACAAACAAAAATATCTGAAAAATTAGCAGATTATGTTGCTGATGGTGATTTGGATGCTCATTATATAA AAGTAGAATCAGAACACAGTGCAATGAGTGCAGCAATAGGTGCATCAGGAGCTGGTGTAAGAGTATTTACAGCTACATCA AGTCAAGGATTAGCATATATGCATGAACCAGTATTTGCAGCAGCTGGTATGAGAGTACCAATAGTAATGGCTAATGCAAA TCGTGCATTATCAGCACCTATTAACATATGGAATGATCAACAAGATTCAATATCTGAAAGAGATAGTGGATGGATACAGT TATATGCAGAAACTGGTCAAGAGGCATTTGATACAATATTACAAGCATATAAAATATCTGAAAATCAGGATATCTTATTA CCTACAATGGTATGTATAGATGGATTTATATTAACACACACTGTAGATCCTGTTGAAGTATTATCACAAGAAGAAGTAGA TTCATTCCTACCAAAATATACAAGAGGATATTCATATCTTGACCCAGAAGATCCAATGTCTTTAGGAACATTAGCAGATA CAGAATCATACCTAGAAATTAGACATGACATGGAAATAGCTATGGAACACTCATTAGATGTTATTGAAGAAGTAGGTAAA GAATTTGGTGACTTATTTGGAAGATACTATGGTCTTATTGAAGAATATAAATCTGAAGATGCAGACATAATCCTAATAGC AATGGGTTCACTTTGTGGAACAATAAAAGATGTTGTTGACAAAGAAAGAGAAAATGGTAAAAAAGTAGGATTAGTAAGAA TAAGATCATACAGACCATTCCCAAAAGATGCTTTAAAAGTAGCAGTTAAAGATGCAAAATTAGCTGTTATTGATAAAGAT ATATCCTTTGGTGCAGGTGGAGCTGTATATATGGATGTAAAAGCAGCACTTGATAATGAAACATATGGTTTCATAATAGG TCTAGGTGGAAGAGACATAACTCCAATAGATATAGAAGAAATCATTGAAAAAACCGAAAATCCAACAAAAGATATAGAAT GGATAGGATTAAGGGAGTAG
Upstream 100 bases:
>100_bases TTTCAGTAGAATTTAATCATGATTATGACTATTGTAAAGGTTGTGGAATATGTGCAGAGGAATGTCCAGTTGACGCAATT AAAATGGTGAGGGAATAAAT
Downstream 100 bases:
>100_bases ATTAAGATGAAAGGTATTGACGAAAAAGAATATTTAGCATCAGGACACCGAGCATGTGCAGGATGTGGTGCTACAATAGC TGTAAGATTAGCTCTAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Pyruvate oxidoreductase alpha chain; POR; Pyruvic-ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MVKKVISSAEAVSEAVKRARPSVIPVYPITPQTKISEKLADYVADGDLDAHYIKVESEHSAMSAAIGASGAGVRVFTATS SQGLAYMHEPVFAAAGMRVPIVMANANRALSAPINIWNDQQDSISERDSGWIQLYAETGQEAFDTILQAYKISENQDILL PTMVCIDGFILTHTVDPVEVLSQEEVDSFLPKYTRGYSYLDPEDPMSLGTLADTESYLEIRHDMEIAMEHSLDVIEEVGK EFGDLFGRYYGLIEEYKSEDADIILIAMGSLCGTIKDVVDKERENGKKVGLVRIRSYRPFPKDALKVAVKDAKLAVIDKD ISFGAGGAVYMDVKAALDNETYGFIIGLGGRDITPIDIEEIIEKTENPTKDIEWIGLRE
Sequences:
>Translated_379_residues MVKKVISSAEAVSEAVKRARPSVIPVYPITPQTKISEKLADYVADGDLDAHYIKVESEHSAMSAAIGASGAGVRVFTATS SQGLAYMHEPVFAAAGMRVPIVMANANRALSAPINIWNDQQDSISERDSGWIQLYAETGQEAFDTILQAYKISENQDILL PTMVCIDGFILTHTVDPVEVLSQEEVDSFLPKYTRGYSYLDPEDPMSLGTLADTESYLEIRHDMEIAMEHSLDVIEEVGK EFGDLFGRYYGLIEEYKSEDADIILIAMGSLCGTIKDVVDKERENGKKVGLVRIRSYRPFPKDALKVAVKDAKLAVIDKD ISFGAGGAVYMDVKAALDNETYGFIIGLGGRDITPIDIEEIIEKTENPTKDIEWIGLRE >Mature_379_residues MVKKVISSAEAVSEAVKRARPSVIPVYPITPQTKISEKLADYVADGDLDAHYIKVESEHSAMSAAIGASGAGVRVFTATS SQGLAYMHEPVFAAAGMRVPIVMANANRALSAPINIWNDQQDSISERDSGWIQLYAETGQEAFDTILQAYKISENQDILL PTMVCIDGFILTHTVDPVEVLSQEEVDSFLPKYTRGYSYLDPEDPMSLGTLADTESYLEIRHDMEIAMEHSLDVIEEVGK EFGDLFGRYYGLIEEYKSEDADIILIAMGSLCGTIKDVVDKERENGKKVGLVRIRSYRPFPKDALKVAVKDAKLAVIDKD ISFGAGGAVYMDVKAALDNETYGFIIGLGGRDITPIDIEEIIEKTENPTKDIEWIGLRE
Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]
COG id: COG0674
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787642, Length=344, Percent_Identity=28.7790697674419, Blast_Score=129, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002880 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005476 [H]
Pfam domain/function: PF01855 POR_N; PF02780 Transketolase_C [H]
EC number: =1.2.7.1 [H]
Molecular weight: Translated: 41716; Mature: 41716
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKKVISSAEAVSEAVKRARPSVIPVYPITPQTKISEKLADYVADGDLDAHYIKVESEHS CHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCHH AMSAAIGASGAGVRVFTATSSQGLAYMHEPVFAAAGMRVPIVMANANRALSAPINIWNDQ HHHHHHCCCCCCEEEEEECCCCCCEEHHCCHHHHCCCEEEEEEECCCCEEECCCCCCCCC QDSISERDSGWIQLYAETGQEAFDTILQAYKISENQDILLPTMVCIDGFILTHTVDPVEV CHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCCEEECCCHHHH LSQEEVDSFLPKYTRGYSYLDPEDPMSLGTLADTESYLEIRHDMEIAMEHSLDVIEEVGK HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH EFGDLFGRYYGLIEEYKSEDADIILIAMGSLCGTIKDVVDKERENGKKVGLVRIRSYRPF HHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCC PKDALKVAVKDAKLAVIDKDISFGAGGAVYMDVKAALDNETYGFIIGLGGRDITPIDIEE CHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCHHH IIEKTENPTKDIEWIGLRE HHHHCCCCCCCCCEEECCC >Mature Secondary Structure MVKKVISSAEAVSEAVKRARPSVIPVYPITPQTKISEKLADYVADGDLDAHYIKVESEHS CHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCHH AMSAAIGASGAGVRVFTATSSQGLAYMHEPVFAAAGMRVPIVMANANRALSAPINIWNDQ HHHHHHCCCCCCEEEEEECCCCCCEEHHCCHHHHCCCEEEEEEECCCCEEECCCCCCCCC QDSISERDSGWIQLYAETGQEAFDTILQAYKISENQDILLPTMVCIDGFILTHTVDPVEV CHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCCEEECCCHHHH LSQEEVDSFLPKYTRGYSYLDPEDPMSLGTLADTESYLEIRHDMEIAMEHSLDVIEEVGK HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH EFGDLFGRYYGLIEEYKSEDADIILIAMGSLCGTIKDVVDKERENGKKVGLVRIRSYRPF HHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCC PKDALKVAVKDAKLAVIDKDISFGAGGAVYMDVKAALDNETYGFIIGLGGRDITPIDIEE CHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCHHH IIEKTENPTKDIEWIGLRE HHHHCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]