Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489145
Identifier: 84489145
GI number: 84489145
Start: 384010
End: 385125
Strand: Direct
Name: 84489145
Synonym: Msp_0324
Alternate gene names: NA
Gene position: 384010-385125 (Clockwise)
Preceding gene: 84489143
Following gene: 84489146
Centisome position: 21.73
GC content: 25.63
Gene sequence:
>1116_bases ATGACTCTTGAAGATTATGTTGAATGTATTTTAGATAGGGATAGAAAAACATTTTATGATGATTTAGAATGTAGTGGTTT AGAAATTCTTAATAATAAGAATAAAACTCCCATAATTGCAGATTTTACTGAATATTCTCCATTACATAATGGTCATTTAT TTTGTATGAATGAAGCAAAAAAACAACATCCTGAATGTCTGTTTGTAGCTATTATTCCAGGTTTATTTGAACGTAATGGT AGAGGATTACCATATATATTACCTCGTAAAAAAAGAGCAGAGTTAGCTATTAGTTTAGGTGCAGACATTGCTATAGAAGG TCCTCCAATGGGAGTAATGGGTTCTGGACAGTATTCATTATGTTTAGCACTTCTATTTAAGGCATTAAATGCTGATTATA TTCCTAGAGGATATATTAGTAATGACCCTAAATTTAAAATAATACTTGAATATATAAATAAAGGTAAGGGAGTAGCACCT AAACCATACAAGATAATTTCAATGGAAGATAAAAAGGTGTTACTTAATGGTAAGCTAAGTAATGATGACTATGTTATTGT TTCATTAGCCAAATCCTTAAGTAAAATTAATTTTAATTATGAGAATAAATTTATTTTTATTCCTCGTTTAGAAAATGTTA GTGGTACTAGGATAAGAGAATGTATATCTAATAATGAATTTAATGATTTATCAGATATGCTACCTAAAGAAACTATTAAT ATGATAGAAAAGGAAATCCAATTAAATCATGCTCCTTTACATGATTGTAGGTTAAATAAGCGATTAATATACAATGCTAA TCATTTATCAAGGGAAGATTTATCTAATTTAACTCTTATAGATAATAAAACTGTTAATAATATAATAAATAACAGACCAT TTAGTAATGTTGATGAATTATTAGATAGTATTACTTTTGGATTTAGTAGTCATAGAAAACAAAGAATACTAAGTGTATTG GAGGTATGTATTTTTAAGGATGAAATACATAAATATATTAATAATTATCCACAAAAAATTAAAATTTTAGGATATAAAAA TAAAGAAGTTCTAAATAAATTTAAAGTTAATTTGGAAAATAATTTAAAAGGAGAAAATGGAAAAGTATGCCAATAG
Upstream 100 bases:
>100_bases TATTTATGTTTTATTATACACTAATGTTTGTTTTTTTTTTAAACAAGTATATATTATAATAAACATATTTCTTTATTATA TATTGTTGTAGGTTGATTTA
Downstream 100 bases:
>100_bases ATGATAAAGATTTTGTAAAATTAAATTACACTGGAAAAGTTAAAGAAACTGGAGACGTATTTGATACAACATATGAAGAT GTTGCTGAAGAAGCAGGTAT
Product: nucleotidyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MTLEDYVECILDRDRKTFYDDLECSGLEILNNKNKTPIIADFTEYSPLHNGHLFCMNEAKKQHPECLFVAIIPGLFERNG RGLPYILPRKKRAELAISLGADIAIEGPPMGVMGSGQYSLCLALLFKALNADYIPRGYISNDPKFKIILEYINKGKGVAP KPYKIISMEDKKVLLNGKLSNDDYVIVSLAKSLSKINFNYENKFIFIPRLENVSGTRIRECISNNEFNDLSDMLPKETIN MIEKEIQLNHAPLHDCRLNKRLIYNANHLSREDLSNLTLIDNKTVNNIINNRPFSNVDELLDSITFGFSSHRKQRILSVL EVCIFKDEIHKYINNYPQKIKILGYKNKEVLNKFKVNLENNLKGENGKVCQ
Sequences:
>Translated_371_residues MTLEDYVECILDRDRKTFYDDLECSGLEILNNKNKTPIIADFTEYSPLHNGHLFCMNEAKKQHPECLFVAIIPGLFERNG RGLPYILPRKKRAELAISLGADIAIEGPPMGVMGSGQYSLCLALLFKALNADYIPRGYISNDPKFKIILEYINKGKGVAP KPYKIISMEDKKVLLNGKLSNDDYVIVSLAKSLSKINFNYENKFIFIPRLENVSGTRIRECISNNEFNDLSDMLPKETIN MIEKEIQLNHAPLHDCRLNKRLIYNANHLSREDLSNLTLIDNKTVNNIINNRPFSNVDELLDSITFGFSSHRKQRILSVL EVCIFKDEIHKYINNYPQKIKILGYKNKEVLNKFKVNLENNLKGENGKVCQ >Mature_370_residues TLEDYVECILDRDRKTFYDDLECSGLEILNNKNKTPIIADFTEYSPLHNGHLFCMNEAKKQHPECLFVAIIPGLFERNGR GLPYILPRKKRAELAISLGADIAIEGPPMGVMGSGQYSLCLALLFKALNADYIPRGYISNDPKFKIILEYINKGKGVAPK PYKIISMEDKKVLLNGKLSNDDYVIVSLAKSLSKINFNYENKFIFIPRLENVSGTRIRECISNNEFNDLSDMLPKETINM IEKEIQLNHAPLHDCRLNKRLIYNANHLSREDLSNLTLIDNKTVNNIINNRPFSNVDELLDSITFGFSSHRKQRILSVLE VCIFKDEIHKYINNYPQKIKILGYKNKEVLNKFKVNLENNLKGENGKVCQ
Specific function: Unknown
COG id: COG1323
COG function: function code R; Predicted nucleotidyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0348 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR008513 [H]
Pfam domain/function: PF05636 DUF795 [H]
EC number: NA
Molecular weight: Translated: 42522; Mature: 42391
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLEDYVECILDRDRKTFYDDLECSGLEILNNKNKTPIIADFTEYSPLHNGHLFCMNEAK CCHHHHHHHHHCCCCHHHHCCCCCCCCCEECCCCCCCEEEEHHHCCCCCCCEEEEECCHH KQHPECLFVAIIPGLFERNGRGLPYILPRKKRAELAISLGADIAIEGPPMGVMGSGQYSL HCCCCEEEEEEHHHHHHCCCCCCCEECCCCCCCEEEEEECCCEEECCCCCCEECCCHHHH CLALLFKALNADYIPRGYISNDPKFKIILEYINKGKGVAPKPYKIISMEDKKVLLNGKLS HHHHHHHHHCCCCCCCCCCCCCCCCEEHEEHHHCCCCCCCCCEEEEEECCCEEEEECCCC NDDYVIVSLAKSLSKINFNYENKFIFIPRLENVSGTRIRECISNNEFNDLSDMLPKETIN CCCEEEEEHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHCHHHHHH MIEKEIQLNHAPLHDCRLNKRLIYNANHLSREDLSNLTLIDNKTVNNIINNRPFSNVDEL HHHHHHHCCCCCCHHHCCCCEEEECCCCCCHHHHCCEEEECCCHHHHHHCCCCCCHHHHH LDSITFGFSSHRKQRILSVLEVCIFKDEIHKYINNYPQKIKILGYKNKEVLNKFKVNLEN HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCC NLKGENGKVCQ CCCCCCCCCCC >Mature Secondary Structure TLEDYVECILDRDRKTFYDDLECSGLEILNNKNKTPIIADFTEYSPLHNGHLFCMNEAK CHHHHHHHHHCCCCHHHHCCCCCCCCCEECCCCCCCEEEEHHHCCCCCCCEEEEECCHH KQHPECLFVAIIPGLFERNGRGLPYILPRKKRAELAISLGADIAIEGPPMGVMGSGQYSL HCCCCEEEEEEHHHHHHCCCCCCCEECCCCCCCEEEEEECCCEEECCCCCCEECCCHHHH CLALLFKALNADYIPRGYISNDPKFKIILEYINKGKGVAPKPYKIISMEDKKVLLNGKLS HHHHHHHHHCCCCCCCCCCCCCCCCEEHEEHHHCCCCCCCCCEEEEEECCCEEEEECCCC NDDYVIVSLAKSLSKINFNYENKFIFIPRLENVSGTRIRECISNNEFNDLSDMLPKETIN CCCEEEEEHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHCHHHHHH MIEKEIQLNHAPLHDCRLNKRLIYNANHLSREDLSNLTLIDNKTVNNIINNRPFSNVDEL HHHHHHHCCCCCCHHHCCCCEEEECCCCCCHHHHCCEEEECCCHHHHHHCCCCCCHHHHH LDSITFGFSSHRKQRILSVLEVCIFKDEIHKYINNYPQKIKILGYKNKEVLNKFKVNLEN HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCC NLKGENGKVCQ CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]