Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489064
Identifier: 84489064
GI number: 84489064
Start: 295734
End: 295919
Strand: Direct
Name: 84489064
Synonym: Msp_0237
Alternate gene names: NA
Gene position: 295734-295919 (Clockwise)
Preceding gene: 84489063
Following gene: 84489065
Centisome position: 16.73
GC content: 39.78
Gene sequence:
>186_bases ATGGTTGTGACAGTTTATCAAGACAGATGTGATGGAGTAGAAGCATGTCCAAGAAATGGTGTGTGTATGGAAGTATGTGC ACTTGATGCTATTGAACATAAGGGTGATTCCATAATAATTACAGAGGATTGTACAAACTGTGGACTTTGTGTTATGAACT GTCCGAGGGGTGCATTGTCAAAGTAG
Upstream 100 bases:
>100_bases CAACCTATAATAAATCATGAAATATGTCCTGAATGTGGACTATGTGTATTAAATTGTCCAAAACAAGCTATTTCTAAAAC ATAAAAGGAGGGTAATGGCA
Downstream 100 bases:
>100_bases GAAAATAAACTTCAATTATTTATACTTTCTTTTTTTTAAAATATAATTTCATTTAGCCCCTTGATTTAAGTTTATATTAA TTATGAACTATACTCTTTCT
Product: ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 61
Protein sequence:
>61_residues MVVTVYQDRCDGVEACPRNGVCMEVCALDAIEHKGDSIIITEDCTNCGLCVMNCPRGALSK
Sequences:
>Translated_61_residues MVVTVYQDRCDGVEACPRNGVCMEVCALDAIEHKGDSIIITEDCTNCGLCVMNCPRGALSK >Mature_61_residues MVVTVYQDRCDGVEACPRNGVCMEVCALDAIEHKGDSIIITEDCTNCGLCVMNCPRGALSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6552; Mature: 6552
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
13.1 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 18.0 %Cys+Met (Translated Protein) 13.1 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 18.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVTVYQDRCDGVEACPRNGVCMEVCALDAIEHKGDSIIITEDCTNCGLCVMNCPRGALS CEEEEECCCCCCCCCCCCCCCEEEHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCCCC K C >Mature Secondary Structure MVVTVYQDRCDGVEACPRNGVCMEVCALDAIEHKGDSIIITEDCTNCGLCVMNCPRGALS CEEEEECCCCCCCCCCCCCCCEEEHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA