Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is mapA
Identifier: 84489018
GI number: 84489018
Start: 235290
End: 236933
Strand: Direct
Name: mapA
Synonym: Msp_0190
Alternate gene names: NA
Gene position: 235290-236933 (Clockwise)
Preceding gene: 84489017
Following gene: 84489019
Centisome position: 13.31
GC content: 34.73
Gene sequence:
>1644_bases ATGGTAGAAGAATATGCTATAGCAATGGATATAGGAACAAGTGGTGTTAGAGCACAAGCTATTAATGTTGAAGATAATAG TACAATTTCTACAACAGTTACATTAAGACATCCAATTCCTGGAGCTAATGTAATGGATCATTTACATTTTGCAGTGAATG TTGGTAGAGAACAAGCACACCAACTAATAATGGAAGCTGTAAATAAAGTAGTTGACCAGTTAGAAGTGGATAAATCTAAA ATTACTAGATTTGCGGTATGTGGTAACCCAATTCAATTATCATTATTCCAAAATATTGAAATTAGAGATTTAGCATTTTG GGGAACAAATGCTGTTGAACGTATGAAAATTACACCACCAAAAAGAAATGCACAGATTATTAAACCAGGTGATGTTGACT TGGATATTAATCCTGATGCAGATGTATACATACCTCCAGCAATAAAACATGAAATAGGAGCAGATGCACTTGCAATGCTT GTTAAATCTGGTGTTGTTGACAAAGAAGGTATTTACTTAGTATCAGATTTTGGTACAAATGCAGAAATAGCACTTGTAAT AGATGGTGAAATATTTTCTTGTTCAGCAGCAGCAGGACCTGCTATGGAAGGTCAGGCAATTGAATGTGGTATGCTAGCAT CCCCTGGAGCAATTTGTGATGTAACAGCTGAGGGTGATCAGTGGAGAAACATGGTACTTAACAGTGATCTAAAAGTAGAT GCATGTAACTTAATGGATGTAACTACAGGTGAAATTATAGAACAACAGAATCCACAAACACAAGCTCGTGGTATTACAGG TACTGGTGTAATTTCAGCATACAGTTTAGGTACAGAACAGGGAATTATTTCAATTCCAGATATTAAAACTGATGATAATA AAATAAATCTACAAGATGATGTTTACTTATCAGAAAAAGACTTAACTGAAATTGGTAAAGCATTAGGTGCTTTTAGAGCA GCACACATAACATTATGTGTAGAAGCAGGTATTGAATTAGATGATATTGATGCAGTTTATATGGCAGGTGCAAGTGGTTT CTATGTAGATCCAATGAAATCATTAACAGTAGGTCAAATACCTGCATGTTCATGGGATATTTACCAGATAGGTAACACAT CACTCTCTATGGCAAGGGATATTGTTGAAAATCCCGACTTACTAAGTGAATTACAAGAAGTTGCTGATGGTATGAGGGGA AACCATATTACACTTGCAACATCTGAAATATTTGAGAAAATATATGGATTAGAACTTGCTGTATGTGAACAAAACATGCC ATTATGGAAGTATGATGAATGGCTAGAAAGTTATGGCTATGGTAACTTACCTGAAGTAGAGGATGACCCTGAAATTCACA GATTATTTGAGAGTGATATACCAGATATTGGAGTAAATGGTTTATCTATTATTGAAGAGGTAGGTACTAAACTTGAAAGT AAGGTTGAAGGATGTATTAGTTGTCAAGCATGTGCAAATGAATGTCCTGAAAGTGCACTTAAAATTGAAGATGGTGTTGC TACTATACGTTCTGATTACTGTAATGGTAGTGCATGTTTAAGATGTGAGCTTGTATGTCCAGAGAAAGTATTCCTTTATG AGAAAATGTTCTATATTGAAGGTGAGGATGCAAAAAGTTTATAA
Upstream 100 bases:
>100_bases ATACTATAATTAATTAGAGTAAAAAAGTTATATTATGTTTAAACTAATTTACTATAAATAATAAGTGGAATCATATATGT CCAGATAAGGAGATGAGATT
Downstream 100 bases:
>100_bases TTCCTCTTTCTATTTTTTTTATATTATTTAACTTTTTTTTAAATATAATTAGGTATGTCTTCTATGAAATCAATAGTTTT TGATAATGCTGGTACAATTC
Product: MapA
Products: NA
Alternate protein names: Electron Transfer Protein; Corrinoid Activation/Regeneration Protein; Flavoprotein; Vitamin; Ferredoxin Domain-Containing Protein; Iron-Sulfur Protein; Ferredoxin-Containing Protein; ATP Synthase F0 A Subunit; Methyltransferase Activation Protein MapA; Activating; Methylamine Methyltransferase Corrinoid Activation Protein
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MVEEYAIAMDIGTSGVRAQAINVEDNSTISTTVTLRHPIPGANVMDHLHFAVNVGREQAHQLIMEAVNKVVDQLEVDKSK ITRFAVCGNPIQLSLFQNIEIRDLAFWGTNAVERMKITPPKRNAQIIKPGDVDLDINPDADVYIPPAIKHEIGADALAML VKSGVVDKEGIYLVSDFGTNAEIALVIDGEIFSCSAAAGPAMEGQAIECGMLASPGAICDVTAEGDQWRNMVLNSDLKVD ACNLMDVTTGEIIEQQNPQTQARGITGTGVISAYSLGTEQGIISIPDIKTDDNKINLQDDVYLSEKDLTEIGKALGAFRA AHITLCVEAGIELDDIDAVYMAGASGFYVDPMKSLTVGQIPACSWDIYQIGNTSLSMARDIVENPDLLSELQEVADGMRG NHITLATSEIFEKIYGLELAVCEQNMPLWKYDEWLESYGYGNLPEVEDDPEIHRLFESDIPDIGVNGLSIIEEVGTKLES KVEGCISCQACANECPESALKIEDGVATIRSDYCNGSACLRCELVCPEKVFLYEKMFYIEGEDAKSL
Sequences:
>Translated_547_residues MVEEYAIAMDIGTSGVRAQAINVEDNSTISTTVTLRHPIPGANVMDHLHFAVNVGREQAHQLIMEAVNKVVDQLEVDKSK ITRFAVCGNPIQLSLFQNIEIRDLAFWGTNAVERMKITPPKRNAQIIKPGDVDLDINPDADVYIPPAIKHEIGADALAML VKSGVVDKEGIYLVSDFGTNAEIALVIDGEIFSCSAAAGPAMEGQAIECGMLASPGAICDVTAEGDQWRNMVLNSDLKVD ACNLMDVTTGEIIEQQNPQTQARGITGTGVISAYSLGTEQGIISIPDIKTDDNKINLQDDVYLSEKDLTEIGKALGAFRA AHITLCVEAGIELDDIDAVYMAGASGFYVDPMKSLTVGQIPACSWDIYQIGNTSLSMARDIVENPDLLSELQEVADGMRG NHITLATSEIFEKIYGLELAVCEQNMPLWKYDEWLESYGYGNLPEVEDDPEIHRLFESDIPDIGVNGLSIIEEVGTKLES KVEGCISCQACANECPESALKIEDGVATIRSDYCNGSACLRCELVCPEKVFLYEKMFYIEGEDAKSL >Mature_547_residues MVEEYAIAMDIGTSGVRAQAINVEDNSTISTTVTLRHPIPGANVMDHLHFAVNVGREQAHQLIMEAVNKVVDQLEVDKSK ITRFAVCGNPIQLSLFQNIEIRDLAFWGTNAVERMKITPPKRNAQIIKPGDVDLDINPDADVYIPPAIKHEIGADALAML VKSGVVDKEGIYLVSDFGTNAEIALVIDGEIFSCSAAAGPAMEGQAIECGMLASPGAICDVTAEGDQWRNMVLNSDLKVD ACNLMDVTTGEIIEQQNPQTQARGITGTGVISAYSLGTEQGIISIPDIKTDDNKINLQDDVYLSEKDLTEIGKALGAFRA AHITLCVEAGIELDDIDAVYMAGASGFYVDPMKSLTVGQIPACSWDIYQIGNTSLSMARDIVENPDLLSELQEVADGMRG NHITLATSEIFEKIYGLELAVCEQNMPLWKYDEWLESYGYGNLPEVEDDPEIHRLFESDIPDIGVNGLSIIEEVGTKLES KVEGCISCQACANECPESALKIEDGVATIRSDYCNGSACLRCELVCPEKVFLYEKMFYIEGEDAKSL
Specific function: Unknown
COG id: COG3894
COG function: function code R; Uncharacterized metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59463; Mature: 59463
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEEYAIAMDIGTSGVRAQAINVEDNSTISTTVTLRHPIPGANVMDHLHFAVNVGREQAH CCCCEEEEEECCCCCCEEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHHEECCHHHHH QLIMEAVNKVVDQLEVDKSKITRFAVCGNPIQLSLFQNIEIRDLAFWGTNAVERMKITPP HHHHHHHHHHHHHHHCCHHHCEEEEEECCCEEEEEECCCEEEEEEEECCCCEEEEECCCC KRNAQIIKPGDVDLDINPDADVYIPPAIKHEIGADALAMLVKSGVVDKEGIYLVSDFGTN CCCCEEECCCCEEEEECCCCCEEECCHHHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCC AEIALVIDGEIFSCSAAAGPAMEGQAIECGMLASPGAICDVTAEGDQWRNMVLNSDLKVD CEEEEEECCCEEEECCCCCCCCCCCEEEECEECCCCCEEEEECCCHHHHHHHCCCCCCEE ACNLMDVTTGEIIEQQNPQTQARGITGTGVISAYSLGTEQGIISIPDIKTDDNKINLQDD EECEEECCHHHHHHCCCCCHHHCCCCCCCEEEEEECCCCCCEEECCCCCCCCCEEECCCC VYLSEKDLTEIGKALGAFRAAHITLCVEAGIELDDIDAVYMAGASGFYVDPMKSLTVGQI EEECHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCEEEEECCCCEEECCCCCCCCCCC PACSWDIYQIGNTSLSMARDIVENPDLLSELQEVADGMRGNHITLATSEIFEKIYGLELA CCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCEEE VCEQNMPLWKYDEWLESYGYGNLPEVEDDPEIHRLFESDIPDIGVNGLSIIEEVGTKLES EECCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH KVEGCISCQACANECPESALKIEDGVATIRSDYCNGSACLRCELVCPEKVFLYEKMFYIE HHHHHEEHHHHHHHCCHHHEEECCCHHHHHHCCCCCCEEEEEEEECCCHHEEEEEEEEEE GEDAKSL CCCCCCC >Mature Secondary Structure MVEEYAIAMDIGTSGVRAQAINVEDNSTISTTVTLRHPIPGANVMDHLHFAVNVGREQAH CCCCEEEEEECCCCCCEEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHHEECCHHHHH QLIMEAVNKVVDQLEVDKSKITRFAVCGNPIQLSLFQNIEIRDLAFWGTNAVERMKITPP HHHHHHHHHHHHHHHCCHHHCEEEEEECCCEEEEEECCCEEEEEEEECCCCEEEEECCCC KRNAQIIKPGDVDLDINPDADVYIPPAIKHEIGADALAMLVKSGVVDKEGIYLVSDFGTN CCCCEEECCCCEEEEECCCCCEEECCHHHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCC AEIALVIDGEIFSCSAAAGPAMEGQAIECGMLASPGAICDVTAEGDQWRNMVLNSDLKVD CEEEEEECCCEEEECCCCCCCCCCCEEEECEECCCCCEEEEECCCHHHHHHHCCCCCCEE ACNLMDVTTGEIIEQQNPQTQARGITGTGVISAYSLGTEQGIISIPDIKTDDNKINLQDD EECEEECCHHHHHHCCCCCHHHCCCCCCCEEEEEECCCCCCEEECCCCCCCCCEEECCCC VYLSEKDLTEIGKALGAFRAAHITLCVEAGIELDDIDAVYMAGASGFYVDPMKSLTVGQI EEECHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCEEEEECCCCEEECCCCCCCCCCC PACSWDIYQIGNTSLSMARDIVENPDLLSELQEVADGMRGNHITLATSEIFEKIYGLELA CCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCEEE VCEQNMPLWKYDEWLESYGYGNLPEVEDDPEIHRLFESDIPDIGVNGLSIIEEVGTKLES EECCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH KVEGCISCQACANECPESALKIEDGVATIRSDYCNGSACLRCELVCPEKVFLYEKMFYIE HHHHHEEHHHHHHHCCHHHEEECCCHHHHHHCCCCCCEEEEEEEECCCHHEEEEEEEEEE GEDAKSL CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA