Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is hmuU [H]
Identifier: 83721599
GI number: 83721599
Start: 1596093
End: 1597193
Strand: Direct
Name: hmuU [H]
Synonym: BTH_I1415
Alternate gene names: 83721599
Gene position: 1596093-1597193 (Clockwise)
Preceding gene: 83719141
Following gene: 83720879
Centisome position: 41.9
GC content: 74.3
Gene sequence:
>1101_bases ATGAGCGGCGCGGCGCGCGCCGACGCACCGCCGGCATCGCGCGGCCGTCGATGGCGCGTGCGGCTCGTGCTGCCCGCGCT TGCGGTGCTCGTCGCGATTTCGATCGTCGCGTCGACCGCGCTCGGCGCGACGACGATCGCGCCGGCGCGGGTCGTCGCGA TCGTGTTGTCGCATCTCGCGGACCTGCGCGTCACGAATGCGCATGTCGCCCACGCGCATGCTGCCGACACGCTCGCCCGG AGCGGCGCATCGTTCGCCGAAGACAGCATCGTCTGGCAGATCAGATTGCCGCGCGCGCTGCTCGCGGCGCTCGTCGGCGC GACGCTCGCGATGGTCGGCGTCGCGCTGCAGGCGGCGACCGCGAACCGGCTCGCCGACCCGCACCTGCTTGGCGTGAGCT CGGGCGCGATGCTTGGCGCGGTGGCGGCGACGCTCGGCCTCGGCGCCGCGTTCGGGCCGTTCACGCTGTCGTTCGCGGCG TTCGCGGGCGCGCTCGCCGCCACCGCGCTCGTGATCGCGCTCGCATACCGGCGCGGCCGGCTCGAGGCGGACCGGTTGCT GCTCGCGGGCGTCGCGGTGTCGTTCATGATGACCGCGCTCGCGAACCTGCTGCTGTATCTCGGCGATCCGCGCGCCGCGT CGTCCGTGCTGTTCTGGATGCTGGGCGGCGTCGGGCTCGCGCGCTGGGATCTGCTCGCCGCGCCCGCATGCTGCGCGGCG CTCGCGGCGCTGCTGCTCTTCGCGCGCCGGCGCGAACTAAACGCGCTGATGTCGGGCGACGTCGCGGCGGTGTCGCTCGG CGTGCCCGTCGCGCGGATGCGTCGTGAGGTGTTCGTGATCGCTTCGTTCGCGACGGGCGCGATGGTCGCGGTGAGCGGCG CGATCGGCTTCGTCGGGCTCGTGACGCCGCATCTGTGCCGGCGGCTCGTCGGTGCGGAGCATGCCCGGCTGCTGCCGGTC GCCGGGTTGAGCGGCGCGGCGTTGCTCGTGTGGGCCGACGTCGCCGCGCGCACGCTCGCCGCGCCGGAGGATCTGCCGAT CGGCATCGTGACCGCGGGGCTCGGCGGCGCGTTCTTCGTTGTGCTGATGCGGCGGCGGTGA
Upstream 100 bases:
>100_bases TGATTCCGTACGATGCGGCGACGCCCGGCGTCGAGAACGCGGCGGCCGTCGAGACGATCGCGCGCGGCCTGCATCCGCGC GCGTTCGCGAAGGCCGCGCG
Downstream 100 bases:
>100_bases GCGCAGGCGCGCGGCGAATCGAGGCGTCGCGCGTCGCATGGCGCGATCGCGCGCGCCGCGTTCGCCGGCTCTCAGCGCCG CTTTCCGCGCAAAGTCAGTT
Product: iron compound ABC transporter permease
Products: ADP; phosphate; cob(I)alamin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MSGAARADAPPASRGRRWRVRLVLPALAVLVAISIVASTALGATTIAPARVVAIVLSHLADLRVTNAHVAHAHAADTLAR SGASFAEDSIVWQIRLPRALLAALVGATLAMVGVALQAATANRLADPHLLGVSSGAMLGAVAATLGLGAAFGPFTLSFAA FAGALAATALVIALAYRRGRLEADRLLLAGVAVSFMMTALANLLLYLGDPRAASSVLFWMLGGVGLARWDLLAAPACCAA LAALLLFARRRELNALMSGDVAAVSLGVPVARMRREVFVIASFATGAMVAVSGAIGFVGLVTPHLCRRLVGAEHARLLPV AGLSGAALLVWADVAARTLAAPEDLPIGIVTAGLGGAFFVVLMRRR
Sequences:
>Translated_366_residues MSGAARADAPPASRGRRWRVRLVLPALAVLVAISIVASTALGATTIAPARVVAIVLSHLADLRVTNAHVAHAHAADTLAR SGASFAEDSIVWQIRLPRALLAALVGATLAMVGVALQAATANRLADPHLLGVSSGAMLGAVAATLGLGAAFGPFTLSFAA FAGALAATALVIALAYRRGRLEADRLLLAGVAVSFMMTALANLLLYLGDPRAASSVLFWMLGGVGLARWDLLAAPACCAA LAALLLFARRRELNALMSGDVAAVSLGVPVARMRREVFVIASFATGAMVAVSGAIGFVGLVTPHLCRRLVGAEHARLLPV AGLSGAALLVWADVAARTLAAPEDLPIGIVTAGLGGAFFVVLMRRR >Mature_365_residues SGAARADAPPASRGRRWRVRLVLPALAVLVAISIVASTALGATTIAPARVVAIVLSHLADLRVTNAHVAHAHAADTLARS GASFAEDSIVWQIRLPRALLAALVGATLAMVGVALQAATANRLADPHLLGVSSGAMLGAVAATLGLGAAFGPFTLSFAAF AGALAATALVIALAYRRGRLEADRLLLAGVAVSFMMTALANLLLYLGDPRAASSVLFWMLGGVGLARWDLLAAPACCAAL AALLLFARRRELNALMSGDVAAVSLGVPVARMRREVFVIASFATGAMVAVSGAIGFVGLVTPHLCRRLVGAEHARLLPVA GLSGAALLVWADVAARTLAAPEDLPIGIVTAGLGGAFFVVLMRRR
Specific function: Part of the binding-protein-dependent transport system for hemin; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788004, Length=281, Percent_Identity=40.9252669039146, Blast_Score=143, Evalue=1e-35, Organism=Escherichia coli, GI1790741, Length=286, Percent_Identity=37.0629370629371, Blast_Score=141, Evalue=8e-35, Organism=Escherichia coli, GI1790740, Length=285, Percent_Identity=38.5964912280702, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI1786805, Length=288, Percent_Identity=36.4583333333333, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1786804, Length=276, Percent_Identity=34.4202898550725, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1786347, Length=287, Percent_Identity=32.404181184669, Blast_Score=99, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 37339; Mature: 37208
Theoretical pI: Translated: 12.04; Mature: 12.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGAARADAPPASRGRRWRVRLVLPALAVLVAISIVASTALGATTIAPARVVAIVLSHLA CCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH DLRVTNAHVAHAHAADTLARSGASFAEDSIVWQIRLPRALLAALVGATLAMVGVALQAAT HHEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH ANRLADPHLLGVSSGAMLGAVAATLGLGAAFGPFTLSFAAFAGALAATALVIALAYRRGR HHHCCCCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LEADRLLLAGVAVSFMMTALANLLLYLGDPRAASSVLFWMLGGVGLARWDLLAAPACCAA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LAALLLFARRRELNALMSGDVAAVSLGVPVARMRREVFVIASFATGAMVAVSGAIGFVGL HHHHHHHHHHHHHHHHHCCCHHEEECCCCHHHHHHHEEEEEECCCCHHHHHHHHHHHHHH VTPHLCRRLVGAEHARLLPVAGLSGAALLVWADVAARTLAAPEDLPIGIVTAGLGGAFFV HHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHH VLMRRR HHHCCC >Mature Secondary Structure SGAARADAPPASRGRRWRVRLVLPALAVLVAISIVASTALGATTIAPARVVAIVLSHLA CCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH DLRVTNAHVAHAHAADTLARSGASFAEDSIVWQIRLPRALLAALVGATLAMVGVALQAAT HHEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH ANRLADPHLLGVSSGAMLGAVAATLGLGAAFGPFTLSFAAFAGALAATALVIALAYRRGR HHHCCCCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LEADRLLLAGVAVSFMMTALANLLLYLGDPRAASSVLFWMLGGVGLARWDLLAAPACCAA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LAALLLFARRRELNALMSGDVAAVSLGVPVARMRREVFVIASFATGAMVAVSGAIGFVGL HHHHHHHHHHHHHHHHHCCCHHEEECCCCHHHHHHHEEEEEECCCCHHHHHHHHHHHHHH VTPHLCRRLVGAEHARLLPVAGLSGAALLVWADVAARTLAAPEDLPIGIVTAGLGGAFFV HHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHH VLMRRR HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; cob(I)alamin [Periplasm]; H2O [C]
Specific reaction: ATP + cob(I)alamin [Periplasm] + H2O = ADP + phosphate + cob(I)alamin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9026634; 11586360; 12142430 [H]