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The map label for this gene is desA [H]

Identifier: 83721503

GI number: 83721503

Start: 2000488

End: 2001852

Strand: Reverse

Name: desA [H]

Synonym: BTH_I1784

Alternate gene names: 83721503

Gene position: 2001852-2000488 (Counterclockwise)

Preceding gene: 83719004

Following gene: 83719418

Centisome position: 52.55

GC content: 68.57

Gene sequence:

>1365_bases
ATGCCGTCCCGCGTTGGACGGCATCGCCTTGTGTTGCCGCCGGAGCGCACGGGGATTCGGGCCCCGCGCCGGTCCGGCCG
CTTGTTGCCGTGCCGCACGCGCCGCGACCGCAATCGCGATCCGGCAACCGGCATGCGCGCCGCCCTCGCCCGCCGCCGCG
ATTTCGCCGCGGATCGCAAAGCAGCGGGAAACGGCGCATCGACGTCTCTTTGTGTGATCGACTCCATGAACGACTCCTCC
ACCCCCATTCGCGTCGACGAGCCGATGCCGCACCGCAAGGTCATCCGCGCTTGGATCACGCCGTTCGGCGACCGCGTGAT
CGCGCGCTCGATCGTGCTGCTCGTCGTCGACTATCTGCTGCTCTTCGCGGCGTTCGCGGGCGCGCTGCTCGCGGCATCGA
GCATCGTGAAGATCGTCTGCGGGATGGCGGCCGGTTTTATCACCGGGCGCCTCTTCATCATCGGCCACGACGCGTGCCAC
CAGAGCCTCACGCCGAATCACCGGCTCAACCGCTGGCTCGGCCGCATCGCGTTCCTGCCGTCGCTCACGCCTTACAGCCT
GTGGGAGGTCGGCCACAACGTCGTCCACCACGGCTACACGAACCTGAAGGGCTTCGATTTCGTATGGGCGCCGCTCACGC
CCGACGAGTACGCGGCGCTGTCGCCCGCGCGGCGCATGCTCGATCGCGTCTATCGCAGCGGCTGGGCGCCGGGGCTCTAC
TATCTCGTCGAAATCTGGTGGCTGCGGATGTACTTTCCGGCGAAGGCCTACCTCGGCGCGTCGCGGCCGATCTTCCGGCG
CGACTGCCTGCTCGTCACGGGCTTCGCCGCGCTGTGGATCGGCGCGGTCGTCCAGATCGCCGCGGCGACGCAGCAGCCGA
CGCTGCTGCTGCTCTTCACGGGCGTCGCCGTGCCTTTCCTGTTCTGGTGCTCGATGATCGGCTTCGTCGTCTACGTTCAC
CATACCGATCCGCGCATCTCGTGGCACGCGAACCGCGCCGAGTGGTCGCGCGCGGCGCCGTTCGTGTCGACGACGCTGCA
CCTGACGTTCCCGTTCGGCATCGGCGGGCTGCTGCATCACATCATGGAGCACACCGCGCACCACGTCGACATGAGCATCC
CGCTGTACGGGCTGAAGGACGCGCAGGCAAAGCTCGAGGCGATGCTGCCGGGCCGCATCGTCGTGCAGCGCTTCAGCTGG
CGCTGGTATTTCGATACCGCGCGGCGCTGCAAGCTCTACGATACCGGCCGCAGGCACTGGACCGACTATCGCGGCCGCGC
GACGAGCGACGCGCATCTGCGCGCGGATGCGCCGATGGCCGAGCAGCGTCCGATCGACGCGCCGACCGGGCTGAGCGGCG
CGTGA

Upstream 100 bases:

>100_bases
GCGCTGACCGCGCTGATCCTGATCTTCGGCACGGTCTGGGTCATGCACAACGTCAGCATGAACATGATGTCCCGATAGCG
GGCCGTTTCGCCCGCCGCCG

Downstream 100 bases:

>100_bases
CGCCGGCGGCCGCGCGGCGACGGGATTGCCACGCCGCCTTCGTCATTCGCCCCGATTGCGGCGCTCGCCGCAGCCAGCCG
CGACAATCGCCGCGCTCGCC

Product: fatty acid desaturase domain-containing protein

Products: NA

Alternate protein names: Delta(12)-desaturase [H]

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MPSRVGRHRLVLPPERTGIRAPRRSGRLLPCRTRRDRNRDPATGMRAALARRRDFAADRKAAGNGASTSLCVIDSMNDSS
TPIRVDEPMPHRKVIRAWITPFGDRVIARSIVLLVVDYLLLFAAFAGALLAASSIVKIVCGMAAGFITGRLFIIGHDACH
QSLTPNHRLNRWLGRIAFLPSLTPYSLWEVGHNVVHHGYTNLKGFDFVWAPLTPDEYAALSPARRMLDRVYRSGWAPGLY
YLVEIWWLRMYFPAKAYLGASRPIFRRDCLLVTGFAALWIGAVVQIAAATQQPTLLLLFTGVAVPFLFWCSMIGFVVYVH
HTDPRISWHANRAEWSRAAPFVSTTLHLTFPFGIGGLLHHIMEHTAHHVDMSIPLYGLKDAQAKLEAMLPGRIVVQRFSW
RWYFDTARRCKLYDTGRRHWTDYRGRATSDAHLRADAPMAEQRPIDAPTGLSGA

Sequences:

>Translated_454_residues
MPSRVGRHRLVLPPERTGIRAPRRSGRLLPCRTRRDRNRDPATGMRAALARRRDFAADRKAAGNGASTSLCVIDSMNDSS
TPIRVDEPMPHRKVIRAWITPFGDRVIARSIVLLVVDYLLLFAAFAGALLAASSIVKIVCGMAAGFITGRLFIIGHDACH
QSLTPNHRLNRWLGRIAFLPSLTPYSLWEVGHNVVHHGYTNLKGFDFVWAPLTPDEYAALSPARRMLDRVYRSGWAPGLY
YLVEIWWLRMYFPAKAYLGASRPIFRRDCLLVTGFAALWIGAVVQIAAATQQPTLLLLFTGVAVPFLFWCSMIGFVVYVH
HTDPRISWHANRAEWSRAAPFVSTTLHLTFPFGIGGLLHHIMEHTAHHVDMSIPLYGLKDAQAKLEAMLPGRIVVQRFSW
RWYFDTARRCKLYDTGRRHWTDYRGRATSDAHLRADAPMAEQRPIDAPTGLSGA
>Mature_453_residues
PSRVGRHRLVLPPERTGIRAPRRSGRLLPCRTRRDRNRDPATGMRAALARRRDFAADRKAAGNGASTSLCVIDSMNDSST
PIRVDEPMPHRKVIRAWITPFGDRVIARSIVLLVVDYLLLFAAFAGALLAASSIVKIVCGMAAGFITGRLFIIGHDACHQ
SLTPNHRLNRWLGRIAFLPSLTPYSLWEVGHNVVHHGYTNLKGFDFVWAPLTPDEYAALSPARRMLDRVYRSGWAPGLYY
LVEIWWLRMYFPAKAYLGASRPIFRRDCLLVTGFAALWIGAVVQIAAATQQPTLLLLFTGVAVPFLFWCSMIGFVVYVHH
TDPRISWHANRAEWSRAAPFVSTTLHLTFPFGIGGLLHHIMEHTAHHVDMSIPLYGLKDAQAKLEAMLPGRIVVQRFSWR
WYFDTARRCKLYDTGRRHWTDYRGRATSDAHLRADAPMAEQRPIDAPTGLSGA

Specific function: Can introduce a second cis double bond at the Delta(12) position of fatty acid bound to membranes glycerolipids. This enzyme is involved in chilling tolerance because the phase transition temperature of lipids of cellular membranes depends on the degree o

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: NA

Molecular weight: Translated: 51136; Mature: 51005

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSRVGRHRLVLPPERTGIRAPRRSGRLLPCRTRRDRNRDPATGMRAALARRRDFAADRK
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AAGNGASTSLCVIDSMNDSSTPIRVDEPMPHRKVIRAWITPFGDRVIARSIVLLVVDYLL
CCCCCCCCEEEEEECCCCCCCCEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LFAAFAGALLAASSIVKIVCGMAAGFITGRLFIIGHDACHQSLTPNHRLNRWLGRIAFLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECHHHHCCCCCCHHHHHHHHHHHHCC
SLTPYSLWEVGHNVVHHGYTNLKGFDFVWAPLTPDEYAALSPARRMLDRVYRSGWAPGLY
CCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH
YLVEIWWLRMYFPAKAYLGASRPIFRRDCLLVTGFAALWIGAVVQIAAATQQPTLLLLFT
HHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHH
GVAVPFLFWCSMIGFVVYVHHTDPRISWHANRAEWSRAAPFVSTTLHLTFPFGIGGLLHH
HHHHHHHHHHHHHHHEEEEEECCCCEEEECCHHHHHHCCCCEEEEEEEEECCCHHHHHHH
IMEHTAHHVDMSIPLYGLKDAQAKLEAMLPGRIVVQRFSWRWYFDTARRCKLYDTGRRHW
HHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCEEEECCCCCEEEEECCCHHC
TDYRGRATSDAHLRADAPMAEQRPIDAPTGLSGA
CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PSRVGRHRLVLPPERTGIRAPRRSGRLLPCRTRRDRNRDPATGMRAALARRRDFAADRK
CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AAGNGASTSLCVIDSMNDSSTPIRVDEPMPHRKVIRAWITPFGDRVIARSIVLLVVDYLL
CCCCCCCCEEEEEECCCCCCCCEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LFAAFAGALLAASSIVKIVCGMAAGFITGRLFIIGHDACHQSLTPNHRLNRWLGRIAFLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECHHHHCCCCCCHHHHHHHHHHHHCC
SLTPYSLWEVGHNVVHHGYTNLKGFDFVWAPLTPDEYAALSPARRMLDRVYRSGWAPGLY
CCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH
YLVEIWWLRMYFPAKAYLGASRPIFRRDCLLVTGFAALWIGAVVQIAAATQQPTLLLLFT
HHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHH
GVAVPFLFWCSMIGFVVYVHHTDPRISWHANRAEWSRAAPFVSTTLHLTFPFGIGGLLHH
HHHHHHHHHHHHHHHEEEEEECCCCEEEECCHHHHHHCCCCEEEEEEEEECCCHHHHHHH
IMEHTAHHVDMSIPLYGLKDAQAKLEAMLPGRIVVQRFSWRWYFDTARRCKLYDTGRRHW
HHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCEEEECCCCCEEEEECCCHHC
TDYRGRATSDAHLRADAPMAEQRPIDAPTGLSGA
CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA