Definition Burkholderia thailandensis E264 chromosome chromosome I, complete sequence.
Accession NC_007651
Length 3,809,201

Click here to switch to the map view.

The map label for this gene is dtd [H]

Identifier: 83721424

GI number: 83721424

Start: 1389506

End: 1389964

Strand: Direct

Name: dtd [H]

Synonym: BTH_I1242

Alternate gene names: 83721424

Gene position: 1389506-1389964 (Clockwise)

Preceding gene: 83720501

Following gene: 83719790

Centisome position: 36.48

GC content: 71.46

Gene sequence:

>459_bases
ATGATCGCATTGATCCAGCGTGTGAAGCGCGCCGACGTGCGCGTGGGCGAGCGCGTGACGGGCGAGATCGGCCCGGGCCT
TCTCGCGCTCGTCTGCGCGGAGCGCGGCGACACCGAGGCGGCCGCCGACAAGTTGCTCGCGAAGGTGCTCGGCTACCGCG
TGTTCAGCGACGCGGCGGGCAAGATGAACCTGCCCGTGTCGAACCTCGACGGCGCGGGACGTGCGGGCGGCCTGCTGCTC
GTGTCGCAGTTCACGCTCGCCGCCGACACGAACAGCGGCCTGCGCCCGAGCTTCACGCCGGCCGCGCCGCCCGACGAGGG
CGAGCGCCTGTTCGACTACTTCGTGCGCCGGGCACGCGAGCGTCACCCGATCGTCGCGACGGGCGAATTCGGCGCCGACA
TGCAGGTGTCGCTCGTCAACGACGGCCCCGTGACGTTCTGGTTGCAGACGCGCGCCTGA

Upstream 100 bases:

>100_bases
CTCACCGCATGAGCGCGCGCATCGCCGCTTGGCCGGGCATGCCGCGCGCCGCGCGCGGCATGCATCGCGGCCGCGCCGCG
CACGTGACGCTGGCGCACGC

Downstream 100 bases:

>100_bases
TGCGCCCTTGACGCTCCGATTCGAGACCGCACCGATGCCCACGACGCAAGTCCTCTTCATTCGCCACGGCGAGACGGCCT
GGAACCGCATCAAGCGGATT

Product: D-tyrosyl-tRNA(Tyr) deacylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MIALIQRVKRADVRVGERVTGEIGPGLLALVCAERGDTEAAADKLLAKVLGYRVFSDAAGKMNLPVSNLDGAGRAGGLLL
VSQFTLAADTNSGLRPSFTPAAPPDEGERLFDYFVRRARERHPIVATGEFGADMQVSLVNDGPVTFWLQTRA

Sequences:

>Translated_152_residues
MIALIQRVKRADVRVGERVTGEIGPGLLALVCAERGDTEAAADKLLAKVLGYRVFSDAAGKMNLPVSNLDGAGRAGGLLL
VSQFTLAADTNSGLRPSFTPAAPPDEGERLFDYFVRRARERHPIVATGEFGADMQVSLVNDGPVTFWLQTRA
>Mature_152_residues
MIALIQRVKRADVRVGERVTGEIGPGLLALVCAERGDTEAAADKLLAKVLGYRVFSDAAGKMNLPVSNLDGAGRAGGLLL
VSQFTLAADTNSGLRPSFTPAAPPDEGERLFDYFVRRARERHPIVATGEFGADMQVSLVNDGPVTFWLQTRA

Specific function: Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine [H]

COG id: COG1490

COG function: function code J; D-Tyr-tRNAtyr deacylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DTD family [H]

Homologues:

Organism=Homo sapiens, GI30795227, Length=154, Percent_Identity=37.012987012987, Blast_Score=90, Evalue=9e-19,
Organism=Escherichia coli, GI1790320, Length=149, Percent_Identity=62.4161073825503, Blast_Score=180, Evalue=5e-47,
Organism=Caenorhabditis elegans, GI115533292, Length=154, Percent_Identity=35.7142857142857, Blast_Score=79, Evalue=6e-16,
Organism=Saccharomyces cerevisiae, GI6319982, Length=152, Percent_Identity=38.1578947368421, Blast_Score=89, Evalue=4e-19,
Organism=Drosophila melanogaster, GI281361569, Length=152, Percent_Identity=36.8421052631579, Blast_Score=87, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003732 [H]

Pfam domain/function: PF02580 Tyr_Deacylase [H]

EC number: NA

Molecular weight: Translated: 16254; Mature: 16254

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIALIQRVKRADVRVGERVTGEIGPGLLALVCAERGDTEAAADKLLAKVLGYRVFSDAAG
CHHHHHHHHHHHHCCCCEECCCCCCHHEEHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
KMNLPVSNLDGAGRAGGLLLVSQFTLAADTNSGLRPSFTPAAPPDEGERLFDYFVRRARE
CCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
RHPIVATGEFGADMQVSLVNDGPVTFWLQTRA
CCCEEEECCCCCCEEEEEECCCCEEEEEEECC
>Mature Secondary Structure
MIALIQRVKRADVRVGERVTGEIGPGLLALVCAERGDTEAAADKLLAKVLGYRVFSDAAG
CHHHHHHHHHHHHCCCCEECCCCCCHHEEHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
KMNLPVSNLDGAGRAGGLLLVSQFTLAADTNSGLRPSFTPAAPPDEGERLFDYFVRRARE
CCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
RHPIVATGEFGADMQVSLVNDGPVTFWLQTRA
CCCEEEECCCCCCEEEEEECCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA