Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is rkpI [H]
Identifier: 83720782
GI number: 83720782
Start: 1506647
End: 1508230
Strand: Direct
Name: rkpI [H]
Synonym: BTH_I1340
Alternate gene names: 83720782
Gene position: 1506647-1508230 (Clockwise)
Preceding gene: 83719336
Following gene: 83721152
Centisome position: 39.55
GC content: 69.26
Gene sequence:
>1584_bases ATGCGATTCTCGGCAGGCTGTCGTATCTGCCGCGCAAGGAGCGCTAGCGTGAGCGGCGGGCTCGCGCTCATCTTCGCGAT CGCGGCCGCGCTGTCGTTCGCCCTCGATGCGCTTGCGACGCCGCGCGCGCCGTGGCGCAGGCCGATCGCGGCCGCCGCGC TGCACGTGCTCGCGTTCGCGTTCGTCGCGAGCTGCGTGCTGCTCGTCACGGCGCGCGTGCTGTTCTCGGCATTCGTTGCC GTCGCGCTCGTCGGCCTGATGGCCGTCGTGAGCAACGCGAAGCACGAATCGCTGCGCGAGCCGTTCGTGTTCACGGATCT GAGCCTCTTCAGCCAGCTGTTCTCGCATCCGCGCCTGTATCTGCCGTTCCTGAGCGCGGGCAAGGTGGCCGCGATCGCGG CCGGCGTCGCGCTGCTCGCGGCCGGCTACGCGGCCGAGACGCCGCTCGCGCCGAGGCCGTTCGCTGCGGCGGCCGCCGCG GTTCTCGCGTGCTTCGCCTGCGGTTGCGCGCTCGCGAGACGCCTCGCGCTCACGCTCGACGCGAGCGCGGACCAGCGGCG CCACGGTTTCTTCGCGACGTTCGTCGCCTATTTGCTGAACGGGCTGCGGCCCGCGACGCTGCGCGCGTTCGAACGCGCGG CGGCGGCGAGCCCGTTCGCGGACGGCCGGGCCGCCGCGTTTCCCGATGTGATCGTGATCCAGAGCGAATCGTTTTTCGAT GTGCGGCGTGCGGCCGCAGGCATCGAGCCGTCGCTCTTCGCGCATTTCGATCGCGCGCGACGCGAGTCGGCGTTTTACGG CGAGCTTGCGGTGCCCGCGTGGGGCGCCAACACGATGCGCACCGAATTCGCGATGCTGACGGGGCTCGCGTCCGAGCGGC TCGGCTATGCGCGCTTTTATCCGTACGCGTTCCTGCGCCGCGCGTGCGATTCGCTTGCCGGCTGGTTCCGGCGCGGCGGC TACCGGACGGTCGCGATCCATCCGTACTACGCGGATTTCTTCGGTCGCGACCGCGTGTTCCCGCTGATGCATTTCGAGCG TTTCCTCGACATCCGCCATTTCGCCGACGCGCCGCGCGCGGGCCCGTACGTCGCCGATGCGGCAGTCGCGGACGCGCTGA TCGCCGAGCTCGACGCGCCGCGCGCGAAGCCGCTCTTCGCGTTCGCGATGACGATGGAGAACCACGGCCCGCTGCATCTG GAGGCGGTCGAGCCGGGCGAGTCGCGCGCGCGCCATGCGCTCGGCGACGGCGACGAATGGCGCGATTTGACGGTTTACTT GCGTCACGTCGCAAATGCAGATGCAATGATCGGGCGACTGCTCGAGCATCTGCGCGCTCGACGGCGCGACACGGTCGTGT GTTTCTACGGCGATCATGTCCCGGCGCTGCCGCATGTTTTCGGTAAGCTGGGCGTTGCGCCCGAGCGCAGCGACTACTTC ATCTGGCGGAATTTCGGCGCGCCGGACGCCCGTCGACGCGATGCGCGTGTCGAAGAGCTCGGTCTGATCCTGCTTCGCGC GACCGAAGCGCAGGAGGCGAGCAGCCCCGCGGCGAATGCATCGGAAAAAACGACACAACGATGA
Upstream 100 bases:
>100_bases ATTCGCGCGAAGCTCGCGGCCGGGCGCGCGGAGATCGCTTTTCCAGGGCTGCTCGCGCTCGGCATGCGCGTGCTGGCGTT CCTGCCCGCCGCGCTCGCTG
Downstream 100 bases:
>100_bases ATGTAAAGATTGCAATTGTTGGGATGGCGTGTCGCTTTCCCGGTGGCGTAGAGAATCCGGATGCGTTCTGGAAGCTGCTG TGCGACGAGCGCGACGCGGT
Product: capsular polysaccharide biosynthesis protein WcbQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 527; Mature: 527
Protein sequence:
>527_residues MRFSAGCRICRARSASVSGGLALIFAIAAALSFALDALATPRAPWRRPIAAAALHVLAFAFVASCVLLVTARVLFSAFVA VALVGLMAVVSNAKHESLREPFVFTDLSLFSQLFSHPRLYLPFLSAGKVAAIAAGVALLAAGYAAETPLAPRPFAAAAAA VLACFACGCALARRLALTLDASADQRRHGFFATFVAYLLNGLRPATLRAFERAAAASPFADGRAAAFPDVIVIQSESFFD VRRAAAGIEPSLFAHFDRARRESAFYGELAVPAWGANTMRTEFAMLTGLASERLGYARFYPYAFLRRACDSLAGWFRRGG YRTVAIHPYYADFFGRDRVFPLMHFERFLDIRHFADAPRAGPYVADAAVADALIAELDAPRAKPLFAFAMTMENHGPLHL EAVEPGESRARHALGDGDEWRDLTVYLRHVANADAMIGRLLEHLRARRRDTVVCFYGDHVPALPHVFGKLGVAPERSDYF IWRNFGAPDARRRDARVEELGLILLRATEAQEASSPAANASEKTTQR
Sequences:
>Translated_527_residues MRFSAGCRICRARSASVSGGLALIFAIAAALSFALDALATPRAPWRRPIAAAALHVLAFAFVASCVLLVTARVLFSAFVA VALVGLMAVVSNAKHESLREPFVFTDLSLFSQLFSHPRLYLPFLSAGKVAAIAAGVALLAAGYAAETPLAPRPFAAAAAA VLACFACGCALARRLALTLDASADQRRHGFFATFVAYLLNGLRPATLRAFERAAAASPFADGRAAAFPDVIVIQSESFFD VRRAAAGIEPSLFAHFDRARRESAFYGELAVPAWGANTMRTEFAMLTGLASERLGYARFYPYAFLRRACDSLAGWFRRGG YRTVAIHPYYADFFGRDRVFPLMHFERFLDIRHFADAPRAGPYVADAAVADALIAELDAPRAKPLFAFAMTMENHGPLHL EAVEPGESRARHALGDGDEWRDLTVYLRHVANADAMIGRLLEHLRARRRDTVVCFYGDHVPALPHVFGKLGVAPERSDYF IWRNFGAPDARRRDARVEELGLILLRATEAQEASSPAANASEKTTQR >Mature_527_residues MRFSAGCRICRARSASVSGGLALIFAIAAALSFALDALATPRAPWRRPIAAAALHVLAFAFVASCVLLVTARVLFSAFVA VALVGLMAVVSNAKHESLREPFVFTDLSLFSQLFSHPRLYLPFLSAGKVAAIAAGVALLAAGYAAETPLAPRPFAAAAAA VLACFACGCALARRLALTLDASADQRRHGFFATFVAYLLNGLRPATLRAFERAAAASPFADGRAAAFPDVIVIQSESFFD VRRAAAGIEPSLFAHFDRARRESAFYGELAVPAWGANTMRTEFAMLTGLASERLGYARFYPYAFLRRACDSLAGWFRRGG YRTVAIHPYYADFFGRDRVFPLMHFERFLDIRHFADAPRAGPYVADAAVADALIAELDAPRAKPLFAFAMTMENHGPLHL EAVEPGESRARHALGDGDEWRDLTVYLRHVANADAMIGRLLEHLRARRRDTVVCFYGDHVPALPHVFGKLGVAPERSDYF IWRNFGAPDARRRDARVEELGLILLRATEAQEASSPAANASEKTTQR
Specific function: Involved in antigen K (capsular polysaccharide) biosynthesis [H]
COG id: COG1368
COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 57370; Mature: 57370
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFSAGCRICRARSASVSGGLALIFAIAAALSFALDALATPRAPWRRPIAAAALHVLAFA CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH FVASCVLLVTARVLFSAFVAVALVGLMAVVSNAKHESLREPFVFTDLSLFSQLFSHPRLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEHHHHHHHHHHHCCCCEE LPFLSAGKVAAIAAGVALLAAGYAAETPLAPRPFAAAAAAVLACFACGCALARRLALTLD EECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEC ASADQRRHGFFATFVAYLLNGLRPATLRAFERAAAASPFADGRAAAFPDVIVIQSESFFD CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHH VRRAAAGIEPSLFAHFDRARRESAFYGELAVPAWGANTMRTEFAMLTGLASERLGYARFY HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHH PYAFLRRACDSLAGWFRRGGYRTVAIHPYYADFFGRDRVFPLMHFERFLDIRHFADAPRA HHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC GPYVADAAVADALIAELDAPRAKPLFAFAMTMENHGPLHLEAVEPGESRARHALGDGDEW CCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEECCCHHHHHHCCCCCCCH RDLTVYLRHVANADAMIGRLLEHLRARRRDTVVCFYGDHVPALPHVFGKLGVAPERSDYF HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEE IWRNFGAPDARRRDARVEELGLILLRATEAQEASSPAANASEKTTQR EEECCCCCCHHHHHCHHHHHCEEEEEECCHHHCCCCCCCCCHHCCCC >Mature Secondary Structure MRFSAGCRICRARSASVSGGLALIFAIAAALSFALDALATPRAPWRRPIAAAALHVLAFA CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH FVASCVLLVTARVLFSAFVAVALVGLMAVVSNAKHESLREPFVFTDLSLFSQLFSHPRLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEHHHHHHHHHHHCCCCEE LPFLSAGKVAAIAAGVALLAAGYAAETPLAPRPFAAAAAAVLACFACGCALARRLALTLD EECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEC ASADQRRHGFFATFVAYLLNGLRPATLRAFERAAAASPFADGRAAAFPDVIVIQSESFFD CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHH VRRAAAGIEPSLFAHFDRARRESAFYGELAVPAWGANTMRTEFAMLTGLASERLGYARFY HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHH PYAFLRRACDSLAGWFRRGGYRTVAIHPYYADFFGRDRVFPLMHFERFLDIRHFADAPRA HHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC GPYVADAAVADALIAELDAPRAKPLFAFAMTMENHGPLHLEAVEPGESRARHALGDGDEW CCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEECCCHHHHHHCCCCCCCH RDLTVYLRHVANADAMIGRLLEHLRARRRDTVVCFYGDHVPALPHVFGKLGVAPERSDYF HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEE IWRNFGAPDARRRDARVEELGLILLRATEAQEASSPAANASEKTTQR EEECCCCCCHHHHHCHHHHHCEEEEEECCHHHCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9079896; 11481430 [H]