Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_007651 |
Length | 3,809,201 |
Click here to switch to the map view.
The map label for this gene is metE [H]
Identifier: 83720717
GI number: 83720717
Start: 1804010
End: 1806304
Strand: Direct
Name: metE [H]
Synonym: BTH_I1606
Alternate gene names: 83720717
Gene position: 1804010-1806304 (Clockwise)
Preceding gene: 83718823
Following gene: 83718426
Centisome position: 47.36
GC content: 70.54
Gene sequence:
>2295_bases ATGACCACCGCACACATCCTGGGTTTTCCGCGCATCGGCGCGCAACGGGAACTGAAGTTCGCCCTTGAACGCTATTGGCG CGACGGCGCGTCGGCCGACGCCGAGCGCGCGCTCGTCGACACCGGCCGCGCGCTGCGCGCCGCGCATTGGCAGACGCAGC GAGACGCCGGGCTCGACTGCGTGACCGTGGGCGATTTCGCGTGGTACGACCACGTGCTGACGACGCTCGCGCACGTCGGC GGCCTGCCGCGGCGCTTCGGCTTCGACGCGCGCGCGCTCACGCTCGCCGATTACTTCGCGGCCGCGCGCGGCAACGCCGC GCAGCCGGCGATGGAAATGACGAAGTGGTTCGATACGAACTACCACTATCTCGTGCCCGAGTATTCGCCGGCGACGACGT TCGGGCCGGGCGTCGAGTGGCTCTTCGACGAGGTGCGCGAAGCGCGCGCGCTCGGTCATCGCCCGAAGGCGGCGCTCGTC GGCCCGCTCACGCTGCTGTGGCTCGGCAAGGCGCGCGATGGGCTCGCCGATCGTCTCGAACTGCTGCCGCGCCTCGTGCC CGCGTATCGCGCGCTGCTCGCGCGGCTAAGGGAGGCGGGCGTCGACTGGGTGCAGATCGACGAGCCGATCTTCGCGCTCG ATTTGCCCGCCGCGTGGCGCGACGCGGCGCGGCCCGCGTACGAAGCGCTCGTGCCCGGCGCGCCGAAGCTGCTCGTCGCG ACGTATTTCGACGATGTGAGCGAGCACGCGGCGCTGTTGAAGGCGCTGCCCGTCGCGGGCCTGCATGTCGATCTCGTGCG CGGCGATGCGCAGCTCGACGCGTTCGTCGCGGACTATCCGGCCGACAAGGTGCTCTCGTGCGGCATCGTCGACGGCCGCA ACGTGTGGCGCAACGATCTCGACCGCTCGCTCGCTCGGCTCGCGCCGGTGCATGAAACGCTCGGCGAGCGGCTGTGGATC GCGACGAGCTGCTCGCTGCTGCATGCGCCCGTCGATCTCGCGCACGAACCGAAGCTCGACGACGAACTGAAGGCGTGGCT CGCGTTCGCCGTGCAGAAGACGCGCGAAGTCGCCGCGCTGCGTGACGCGCTCGCGAAGGGGCGCGCGGCGGTCGCGGCGG AGTTCGACGCCGCCGCTGTGGCGGCGGCCGCGCGACGCACGTCGGCGCGCATCCACAATCCGCTCGTCAAGCGCCGCGTC GCCGCGTTGACCGACGCCGACGCGCGCCGCGCGAGCGCTTATCCGGCGCGCGCGGCCGCGCAGCGCGCGCGCTTCGACTT GCCGCCGCTGCCGACGACGACGATCGGCTCGTTCCCGCAGACGCCGGAGATCCGCCGCGCGCGCGCCGCGTTCCGGCAGG GCGTGCTCGATCACCTCGGCTATCTGGAGGCGATGCGCGAGCAGGTGCGCATCGCGATCGACAAGCAGCTCTCGTACGGC CTCGACGTGCTCGTGCACGGCGAGGCGGAGCGCAACGACATGGTCGAGTACTTCGGCGAGCTGATGTGGGGCTTCGCGAT CACGAGCAACGGCTGGGTGCAGAGCTACGGATCGCGCTGCGTGAAGCCGCCCCTCGTCTACGGCGACGTCTATCTGCCGG AGCCGATGACGGTCGGCTGGGCGTCGTATGCGCAGAGCCTGACGACCAAGCCGGTGAAGGGCATGCTGACGGGGCCCGTG ACGATGCTGCAATGGTCGTTCGTGCGAGACGACCAGCCGCGCGCGACGACGGCGCTGCAGATCGCGCTCGCGCTGCGGCA GGAGACGCTCGATCTGGAGAAGGCCGGCATCGGGATGATCCAGGTCGACGAGCCGGCGCTGCGCGAGGGGCTGCCGCTGA AGGCGCGCGATCGCGCCGAGTATCTGGACTGGGCGGTGCGCGCGTTCAGGATCGCGGCGTCGGGCGTCGCGGACGACACG CAGATCCACACGCACATGTGCTATTCGGAGTTCGGCGACATTCTGCCGTCGATCGCGGCGCTCGACGCGGACGTGATCTC GATCGAGACGACCCGCTCGAACATGGAGCTGCTCGACGCGTTCGAGACGTTCGAGTATCCGAACGAGATCGGGCCGGGCG TCTACGACATCCATTCGCCTCGCGTGCCGGACGCCGACGAGATCGAGCGGCTCATCCTGCTCGCGCTCGAGCGGATTCCG GCGCAGCGCCTGTGGGTGAATCCGGATTGCGGGCTGAAGACGCGCGAGTGGCGGCAGGTCGACGCGGCGCTCGCGGCGAT GGTCGACGCGGCCAAGCGCGTGCGGCAGACGGTCGAGCAGGCGGTGCCGGCTTGA
Upstream 100 bases:
>100_bases AGATTTGATGTTGAAAAATATTCATGTTGTGCGGCAAAAACTTTCGTTTGAGTAATGATAGGGCAAATCCGATACTGCCG GTCACTTCTGGAGGATCGAG
Downstream 100 bases:
>100_bases TGCGGCGCGAGCGCGCGCGAGGGGCGTGGTCGTGCGCGTGCGGACGCGAATGCGCGTGAACGAGGCGCGCCGAGCGCGGC GTATGCGCTGGATGCGGCCG
Product: 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase
Products: NA
Alternate protein names: Cobalamin-independent methionine synthase; Methionine synthase, vitamin-B12 independent isozyme [H]
Number of amino acids: Translated: 764; Mature: 763
Protein sequence:
>764_residues MTTAHILGFPRIGAQRELKFALERYWRDGASADAERALVDTGRALRAAHWQTQRDAGLDCVTVGDFAWYDHVLTTLAHVG GLPRRFGFDARALTLADYFAAARGNAAQPAMEMTKWFDTNYHYLVPEYSPATTFGPGVEWLFDEVREARALGHRPKAALV GPLTLLWLGKARDGLADRLELLPRLVPAYRALLARLREAGVDWVQIDEPIFALDLPAAWRDAARPAYEALVPGAPKLLVA TYFDDVSEHAALLKALPVAGLHVDLVRGDAQLDAFVADYPADKVLSCGIVDGRNVWRNDLDRSLARLAPVHETLGERLWI ATSCSLLHAPVDLAHEPKLDDELKAWLAFAVQKTREVAALRDALAKGRAAVAAEFDAAAVAAAARRTSARIHNPLVKRRV AALTDADARRASAYPARAAAQRARFDLPPLPTTTIGSFPQTPEIRRARAAFRQGVLDHLGYLEAMREQVRIAIDKQLSYG LDVLVHGEAERNDMVEYFGELMWGFAITSNGWVQSYGSRCVKPPLVYGDVYLPEPMTVGWASYAQSLTTKPVKGMLTGPV TMLQWSFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQVDEPALREGLPLKARDRAEYLDWAVRAFRIAASGVADDT QIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAFETFEYPNEIGPGVYDIHSPRVPDADEIERLILLALERIP AQRLWVNPDCGLKTREWRQVDAALAAMVDAAKRVRQTVEQAVPA
Sequences:
>Translated_764_residues MTTAHILGFPRIGAQRELKFALERYWRDGASADAERALVDTGRALRAAHWQTQRDAGLDCVTVGDFAWYDHVLTTLAHVG GLPRRFGFDARALTLADYFAAARGNAAQPAMEMTKWFDTNYHYLVPEYSPATTFGPGVEWLFDEVREARALGHRPKAALV GPLTLLWLGKARDGLADRLELLPRLVPAYRALLARLREAGVDWVQIDEPIFALDLPAAWRDAARPAYEALVPGAPKLLVA TYFDDVSEHAALLKALPVAGLHVDLVRGDAQLDAFVADYPADKVLSCGIVDGRNVWRNDLDRSLARLAPVHETLGERLWI ATSCSLLHAPVDLAHEPKLDDELKAWLAFAVQKTREVAALRDALAKGRAAVAAEFDAAAVAAAARRTSARIHNPLVKRRV AALTDADARRASAYPARAAAQRARFDLPPLPTTTIGSFPQTPEIRRARAAFRQGVLDHLGYLEAMREQVRIAIDKQLSYG LDVLVHGEAERNDMVEYFGELMWGFAITSNGWVQSYGSRCVKPPLVYGDVYLPEPMTVGWASYAQSLTTKPVKGMLTGPV TMLQWSFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQVDEPALREGLPLKARDRAEYLDWAVRAFRIAASGVADDT QIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAFETFEYPNEIGPGVYDIHSPRVPDADEIERLILLALERIP AQRLWVNPDCGLKTREWRQVDAALAAMVDAAKRVRQTVEQAVPA >Mature_763_residues TTAHILGFPRIGAQRELKFALERYWRDGASADAERALVDTGRALRAAHWQTQRDAGLDCVTVGDFAWYDHVLTTLAHVGG LPRRFGFDARALTLADYFAAARGNAAQPAMEMTKWFDTNYHYLVPEYSPATTFGPGVEWLFDEVREARALGHRPKAALVG PLTLLWLGKARDGLADRLELLPRLVPAYRALLARLREAGVDWVQIDEPIFALDLPAAWRDAARPAYEALVPGAPKLLVAT YFDDVSEHAALLKALPVAGLHVDLVRGDAQLDAFVADYPADKVLSCGIVDGRNVWRNDLDRSLARLAPVHETLGERLWIA TSCSLLHAPVDLAHEPKLDDELKAWLAFAVQKTREVAALRDALAKGRAAVAAEFDAAAVAAAARRTSARIHNPLVKRRVA ALTDADARRASAYPARAAAQRARFDLPPLPTTTIGSFPQTPEIRRARAAFRQGVLDHLGYLEAMREQVRIAIDKQLSYGL DVLVHGEAERNDMVEYFGELMWGFAITSNGWVQSYGSRCVKPPLVYGDVYLPEPMTVGWASYAQSLTTKPVKGMLTGPVT MLQWSFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQVDEPALREGLPLKARDRAEYLDWAVRAFRIAASGVADDTQ IHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAFETFEYPNEIGPGVYDIHSPRVPDADEIERLILLALERIPA QRLWVNPDCGLKTREWRQVDAALAAMVDAAKRVRQTVEQAVPA
Specific function: Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation [H]
COG id: COG0620
COG function: function code E; Methionine synthase II (cobalamin-independent)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the vitamin-B12 independent methionine synthase family [H]
Homologues:
Organism=Escherichia coli, GI2367304, Length=757, Percent_Identity=57.4636723910172, Blast_Score=843, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6320936, Length=775, Percent_Identity=46.4516129032258, Blast_Score=647, Evalue=0.0,
Paralogues:
None
Copy number: 45,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013215 - InterPro: IPR006276 - InterPro: IPR002629 [H]
Pfam domain/function: PF08267 Meth_synt_1; PF01717 Meth_synt_2 [H]
EC number: =2.1.1.14 [H]
Molecular weight: Translated: 84430; Mature: 84299
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAHILGFPRIGAQRELKFALERYWRDGASADAERALVDTGRALRAAHWQTQRDAGLDC CCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHCCCHHCCCCCE VTVGDFAWYDHVLTTLAHVGGLPRRFGFDARALTLADYFAAARGNAAQPAMEMTKWFDTN EEECCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC YHYLVPEYSPATTFGPGVEWLFDEVREARALGHRPKAALVGPLTLLWLGKARDGLADRLE CCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCHHHHEECCCCCCHHHHHH LLPRLVPAYRALLARLREAGVDWVQIDEPIFALDLPAAWRDAARPAYEALVPGAPKLLVA HHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCHHHHHHCCHHHHHHCCCCCCEEHH TYFDDVSEHAALLKALPVAGLHVDLVRGDAQLDAFVADYPADKVLSCGIVDGRNVWRNDL HHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCHHHHEECCCCCCCHHHHHHH DRSLARLAPVHETLGERLWIATSCSLLHAPVDLAHEPKLDDELKAWLAFAVQKTREVAAL HHHHHHHHHHHHHHHCEEEEEECHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RDALAKGRAAVAAEFDAAAVAAAARRTSARIHNPLVKRRVAALTDADARRASAYPARAAA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHH QRARFDLPPLPTTTIGSFPQTPEIRRARAAFRQGVLDHLGYLEAMREQVRIAIDKQLSYG HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LDVLVHGEAERNDMVEYFGELMWGFAITSNGWVQSYGSRCVKPPLVYGDVYLPEPMTVGW CEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEECCEECCCCCCCCH ASYAQSLTTKPVKGMLTGPVTMLQWSFVRDDQPRATTALQIALALRQETLDLEKAGIGMI HHHHHHHCCCCCCCHHCCCHHHHEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE QVDEPALREGLPLKARDRAEYLDWAVRAFRIAASGVADDTQIHTHMCYSEFGDILPSIAA EECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH LDADVISIETTRSNMELLDAFETFEYPNEIGPGVYDIHSPRVPDADEIERLILLALERIP CCCCEEEEEECCCHHHHHHHHHHHCCCHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHCC AQRLWVNPDCGLKTREWRQVDAALAAMVDAAKRVRQTVEQAVPA HHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTAHILGFPRIGAQRELKFALERYWRDGASADAERALVDTGRALRAAHWQTQRDAGLDC CCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHCCCHHCCCCCE VTVGDFAWYDHVLTTLAHVGGLPRRFGFDARALTLADYFAAARGNAAQPAMEMTKWFDTN EEECCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC YHYLVPEYSPATTFGPGVEWLFDEVREARALGHRPKAALVGPLTLLWLGKARDGLADRLE CCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCHHHHEECCCCCCHHHHHH LLPRLVPAYRALLARLREAGVDWVQIDEPIFALDLPAAWRDAARPAYEALVPGAPKLLVA HHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCHHHHHHCCHHHHHHCCCCCCEEHH TYFDDVSEHAALLKALPVAGLHVDLVRGDAQLDAFVADYPADKVLSCGIVDGRNVWRNDL HHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCHHHHEECCCCCCCHHHHHHH DRSLARLAPVHETLGERLWIATSCSLLHAPVDLAHEPKLDDELKAWLAFAVQKTREVAAL HHHHHHHHHHHHHHHCEEEEEECHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RDALAKGRAAVAAEFDAAAVAAAARRTSARIHNPLVKRRVAALTDADARRASAYPARAAA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHH QRARFDLPPLPTTTIGSFPQTPEIRRARAAFRQGVLDHLGYLEAMREQVRIAIDKQLSYG HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LDVLVHGEAERNDMVEYFGELMWGFAITSNGWVQSYGSRCVKPPLVYGDVYLPEPMTVGW CEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEECCEECCCCCCCCH ASYAQSLTTKPVKGMLTGPVTMLQWSFVRDDQPRATTALQIALALRQETLDLEKAGIGMI HHHHHHHCCCCCCCHHCCCHHHHEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE QVDEPALREGLPLKARDRAEYLDWAVRAFRIAASGVADDTQIHTHMCYSEFGDILPSIAA EECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH LDADVISIETTRSNMELLDAFETFEYPNEIGPGVYDIHSPRVPDADEIERLILLALERIP CCCCEEEEEECCCHHHHHHHHHHHCCCHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHCC AQRLWVNPDCGLKTREWRQVDAALAAMVDAAKRVRQTVEQAVPA HHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA