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The map label for this gene is 83720572

Identifier: 83720572

GI number: 83720572

Start: 1958336

End: 1958992

Strand: Reverse

Name: 83720572

Synonym: BTH_I1751

Alternate gene names: NA

Gene position: 1958992-1958336 (Counterclockwise)

Preceding gene: 83719672

Following gene: 83720957

Centisome position: 51.43

GC content: 70.93

Gene sequence:

>657_bases
ATGCCGTTTCCTTTTTCCGCGGCGCGCGCGCCGGCCGCATCATCGCCGGCTTGCGCCCGCCGCACGCGCTTTTTGCGCGT
CGCCGCCTGCGCGGCGGCGGTCGTGCTCGCCGGCTGCACGCCGCGCGGCGAGCCGTGGCGCCTGACGAACGTAACGGGCC
ACCTGCCCGACCTGACGTTCTCGCTCACGGGCGAGGACGGCAAGCCGATCGACGCGTCCGCGTTCCGCGGCCGCGCCGCG
CTCGTCTACTTCGGCTACACGCATTGCCCGGACGTGTGCCCGGAGACGATGGCGCGCCTGATGCGGGTGCTCGCGCTGCT
CGGCCCGGACGTGCGCGACAACGTGCGCATCCTGTTCGTGTCGGTCGACCCGGCGCGCGACACGCCCGCCGCGATGCGCG
ACTACGTCGGCGCGTTCGACGCAGAGCACGCGTACGGGCTGACGGGCAGCGAGCGGCAAATCGAGTCGCTCGCGAAGCGC
TACCGCGTCGCGTATCAGATGGAAAAGCGCGATCCGAACGGCAGCTACGAAGTCACGCACAGCTCGGCCGTCTATGTGTT
CGATGCGCAAGGCCGCGCGCGCCTGCTCGCGACCGACCAGGATTCCCCCGACGCGATCGCCGCCGATCTGCGCCGGATCA
TCGTCAACCGTTCCTGA

Upstream 100 bases:

>100_bases
CGATCGCAGCCGGCGCCGCGCACCGTGATCGCGGCACCCGATACCGCGCGGGGCCGTCGCGCACGATTGCTCTTCGAACC
GTTTCGAACTGAATTCGCCG

Downstream 100 bases:

>100_bases
ACCGGAACCCACTTACCGCCAAGCCGATGACGCTCAAACCGACACTCCTCGCCGCGCTCGCCGCCCTCTCGCTCAGCCTG
AACGCCCACGCGGCCGACGC

Product: SCO1/SenC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MPFPFSAARAPAASSPACARRTRFLRVAACAAAVVLAGCTPRGEPWRLTNVTGHLPDLTFSLTGEDGKPIDASAFRGRAA
LVYFGYTHCPDVCPETMARLMRVLALLGPDVRDNVRILFVSVDPARDTPAAMRDYVGAFDAEHAYGLTGSERQIESLAKR
YRVAYQMEKRDPNGSYEVTHSSAVYVFDAQGRARLLATDQDSPDAIAADLRRIIVNRS

Sequences:

>Translated_218_residues
MPFPFSAARAPAASSPACARRTRFLRVAACAAAVVLAGCTPRGEPWRLTNVTGHLPDLTFSLTGEDGKPIDASAFRGRAA
LVYFGYTHCPDVCPETMARLMRVLALLGPDVRDNVRILFVSVDPARDTPAAMRDYVGAFDAEHAYGLTGSERQIESLAKR
YRVAYQMEKRDPNGSYEVTHSSAVYVFDAQGRARLLATDQDSPDAIAADLRRIIVNRS
>Mature_217_residues
PFPFSAARAPAASSPACARRTRFLRVAACAAAVVLAGCTPRGEPWRLTNVTGHLPDLTFSLTGEDGKPIDASAFRGRAAL
VYFGYTHCPDVCPETMARLMRVLALLGPDVRDNVRILFVSVDPARDTPAAMRDYVGAFDAEHAYGLTGSERQIESLAKRY
RVAYQMEKRDPNGSYEVTHSSAVYVFDAQGRARLLATDQDSPDAIAADLRRIIVNRS

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI4759068, Length=138, Percent_Identity=35.5072463768116, Blast_Score=94, Evalue=9e-20,
Organism=Homo sapiens, GI281182727, Length=133, Percent_Identity=37.593984962406, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI281182722, Length=133, Percent_Identity=37.593984962406, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI281182716, Length=133, Percent_Identity=37.593984962406, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI153791313, Length=133, Percent_Identity=37.593984962406, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17531419, Length=137, Percent_Identity=32.1167883211679, Blast_Score=87, Evalue=8e-18,
Organism=Saccharomyces cerevisiae, GI6319498, Length=136, Percent_Identity=38.9705882352941, Blast_Score=109, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6319511, Length=134, Percent_Identity=31.3432835820896, Blast_Score=86, Evalue=5e-18,
Organism=Drosophila melanogaster, GI19920710, Length=157, Percent_Identity=29.2993630573248, Blast_Score=84, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 23779; Mature: 23648

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFPFSAARAPAASSPACARRTRFLRVAACAAAVVLAGCTPRGEPWRLTNVTGHLPDLTF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEE
SLTGEDGKPIDASAFRGRAALVYFGYTHCPDVCPETMARLMRVLALLGPDVRDNVRILFV
EEECCCCCCCCHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEE
SVDPARDTPAAMRDYVGAFDAEHAYGLTGSERQIESLAKRYRVAYQMEKRDPNGSYEVTH
EECCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
SSAVYVFDAQGRARLLATDQDSPDAIAADLRRIIVNRS
CCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PFPFSAARAPAASSPACARRTRFLRVAACAAAVVLAGCTPRGEPWRLTNVTGHLPDLTF
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEE
SLTGEDGKPIDASAFRGRAALVYFGYTHCPDVCPETMARLMRVLALLGPDVRDNVRILFV
EEECCCCCCCCHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEE
SVDPARDTPAAMRDYVGAFDAEHAYGLTGSERQIESLAKRYRVAYQMEKRDPNGSYEVTH
EECCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
SSAVYVFDAQGRARLLATDQDSPDAIAADLRRIIVNRS
CCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA