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The map label for this gene is yobV [H]

Identifier: 83720517

GI number: 83720517

Start: 1409888

End: 1410574

Strand: Reverse

Name: yobV [H]

Synonym: BTH_I1262

Alternate gene names: 83720517

Gene position: 1410574-1409888 (Counterclockwise)

Preceding gene: 83720141

Following gene: 83718767

Centisome position: 37.03

GC content: 71.76

Gene sequence:

>687_bases
ATGACGCGCCGCGCCGACCGCCTGTTCCAGATCGCCGAATTGCTGCGCGGCCGCCGCCTGACGACCGCGCAGCAGCTCGC
CGACTGGCTGTCGGTGTCGCCGCGCACCGTGTATCGCGACGTGCGGGACCTGCAACTGTCGGGCGTGCCGATCGAGGGCG
AAGCCGGGATCGGCTATCGCCTGAACCGCGCGGCGAGCCTGCCGCCCCTCACGTTCACGGCCGAAGAGCTCGCCGCGCTC
GCGGCGGGCGCGCGGATGCTCGAAACGTGGGGCGGCGCGCGCTTTGCGGGCGGCGCGCGTTCGGCGCTCGCGAAAATCGC
GTCGGCGATGCCCGCCGACAAGCGCGCGACGCTCGACCGGCTCGCGGTGTTCGCGCCGTCGTTTCACATCGACCGTGCGT
TCTCGGAGAAGGTGGATGCGCTGCACGAAGCGGTCGACGGCCGCCGCGTCGTCAGCTTCGCGTACTGCGACCGGCTCGGC
GCGCAGACGACGCGCCGGGTGTGGCCGCTCGGGCTCGTGTATTGGGGCGGACGCTGGACGATCGGCGCGTGGTGCGAGCT
GCGCGAGGACTTCCGCACGTTCGACATCGCGCGCATGAACGAGGTCGCGGTGCACGGCCCGTTTCCCGATCAGGAAGGCA
AGCGGCTCGCCGACTATCTGCGCAAGGCGAACGCACCCGTGCGCTGA

Upstream 100 bases:

>100_bases
CGCGCATGGCGCCGACTACGAAAATCGCGCGCGCCCGCCGTCGCGCGCGGCGCTATCATCGCGGCATTCCCAACCTCGCC
GCCCCACCCGGAGCCTCGCG

Downstream 100 bases:

>100_bases
GCGCGGCGAGGCCGCTTCGCGCGCGATGTCGAACGTGCGCGGCGCACCTCGCACGCGCGGAGCGAACACGGAACGGACGC
CGGTGCGAGCCCGGCGTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MTRRADRLFQIAELLRGRRLTTAQQLADWLSVSPRTVYRDVRDLQLSGVPIEGEAGIGYRLNRAASLPPLTFTAEELAAL
AAGARMLETWGGARFAGGARSALAKIASAMPADKRATLDRLAVFAPSFHIDRAFSEKVDALHEAVDGRRVVSFAYCDRLG
AQTTRRVWPLGLVYWGGRWTIGAWCELREDFRTFDIARMNEVAVHGPFPDQEGKRLADYLRKANAPVR

Sequences:

>Translated_228_residues
MTRRADRLFQIAELLRGRRLTTAQQLADWLSVSPRTVYRDVRDLQLSGVPIEGEAGIGYRLNRAASLPPLTFTAEELAAL
AAGARMLETWGGARFAGGARSALAKIASAMPADKRATLDRLAVFAPSFHIDRAFSEKVDALHEAVDGRRVVSFAYCDRLG
AQTTRRVWPLGLVYWGGRWTIGAWCELREDFRTFDIARMNEVAVHGPFPDQEGKRLADYLRKANAPVR
>Mature_227_residues
TRRADRLFQIAELLRGRRLTTAQQLADWLSVSPRTVYRDVRDLQLSGVPIEGEAGIGYRLNRAASLPPLTFTAEELAALA
AGARMLETWGGARFAGGARSALAKIASAMPADKRATLDRLAVFAPSFHIDRAFSEKVDALHEAVDGRRVVSFAYCDRLGA
QTTRRVWPLGLVYWGGRWTIGAWCELREDFRTFDIARMNEVAVHGPFPDQEGKRLADYLRKANAPVR

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 25386; Mature: 25255

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRADRLFQIAELLRGRRLTTAQQLADWLSVSPRTVYRDVRDLQLSGVPIEGEAGIGYR
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHEECCCCCCCCCCCCEE
LNRAASLPPLTFTAEELAALAAGARMLETWGGARFAGGARSALAKIASAMPADKRATLDR
ECCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
LAVFAPSFHIDRAFSEKVDALHEAVDGRRVVSFAYCDRLGAQTTRRVWPLGLVYWGGRWT
HHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHCCCEEEEECCEEE
IGAWCELREDFRTFDIARMNEVAVHGPFPDQEGKRLADYLRKANAPVR
EHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TRRADRLFQIAELLRGRRLTTAQQLADWLSVSPRTVYRDVRDLQLSGVPIEGEAGIGYR
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHEECCCCCCCCCCCCEE
LNRAASLPPLTFTAEELAALAAGARMLETWGGARFAGGARSALAKIASAMPADKRATLDR
ECCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
LAVFAPSFHIDRAFSEKVDALHEAVDGRRVVSFAYCDRLGAQTTRRVWPLGLVYWGGRWT
HHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHCCCEEEEECCEEE
IGAWCELREDFRTFDIARMNEVAVHGPFPDQEGKRLADYLRKANAPVR
EHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]